RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 RAB11FIP2Q7L804 512 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 SSX7Q7RTT5 188 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 MRPL41Q8IXM3 137 aaKnown RBP8.4□□□□□ -1.06
SYNE1-206ENST00000367253 FBXL6Q8N531 539 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 SLC4A11Q8NBS3 891 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 CELF6Q96J87 481 aaKnown RBP8.4□□□□□ -1.06
SYNE1-206ENST00000367253 WRAP53Q9BUR4 548 aaKnown RBP8.4□□□□□ -1.06
SYNE1-206ENST00000367253 ADAM19Q9H013 955 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 EPHX3Q9H6B9 360 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 RASSF1Q9NS23 344 aa8.4□□□□□ -1.06
SYNE1-206ENST00000367253 LAMB4A4D0S4 1761 aa8.4□□□□□ -1.07
SYNE1-206ENST00000367253 K7EPK0 472 aa8.4□□□□□ -1.07
SYNE1-206ENST00000367253 CDC7O00311 574 aa8.4□□□□□ -1.07
SYNE1-206ENST00000367253 MTHFD2P13995 350 aa8.4□□□□□ -1.07
SYNE1-206ENST00000367253 UQCRC1P31930 480 aa8.4□□□□□ -1.07
SYNE1-206ENST00000367253 FNTBP49356 437 aa8.4□□□□□ -1.07
SYNE1-206ENST00000367253 OR2B6P58173 313 aa8.4□□□□□ -1.07
SYNE1-206ENST00000367253 ANTXR2P58335 489 aa8.4□□□□□ -1.07
SYNE1-206ENST00000367253 KCTD19Q17RG1 926 aaPredicted RBP8.4□□□□□ -1.07
SYNE1-206ENST00000367253 BTBD16Q32M84 506 aa8.4□□□□□ -1.07
SYNE1-206ENST00000367253 FIGNQ5HY92 759 aa8.4□□□□□ -1.07
SYNE1-206ENST00000367253 KIAA1161Q6NSJ0 714 aa8.4□□□□□ -1.07
SYNE1-206ENST00000367253 NLRP8Q86W28 1048 aa8.4□□□□□ -1.07
SYNE1-206ENST00000367253 FAM71E2Q8N5Q1 922 aa8.4□□□□□ -1.07
SYNE1-206ENST00000367253 ZNF596Q8TC21 504 aa8.4□□□□□ -1.07
SYNE1-206ENST00000367253 ADAMTS18Q8TE60 1221 aa8.4□□□□□ -1.07
SYNE1-206ENST00000367253 FCGR1BQ92637 280 aa8.4□□□□□ -1.07
SYNE1-206ENST00000367253 TMEM203Q969S6 136 aa8.4□□□□□ -1.07
SYNE1-206ENST00000367253 UBXN10Q96LJ8 280 aa8.4□□□□□ -1.07
SYNE1-206ENST00000367253 EBF3Q9H4W6 596 aa8.4□□□□□ -1.07
SYNE1-206ENST00000367253 RC3H2Q9HBD1 1191 aaKnown RBP8.4□□□□□ -1.07
SYNE1-206ENST00000367253 TAS2R14Q9NYV8 317 aa8.4□□□□□ -1.07
SYNE1-206ENST00000367253 PSMD13Q9UNM6 376 aa8.4□□□□□ -1.07
SYNE1-206ENST00000367253 MAN2B2Q9Y2E5 1009 aa8.4□□□□□ -1.07
SYNE1-206ENST00000367253 XIRP1Q702N8 1843 aaKnown RBP8.39□□□□□ -1.07
SYNE1-206ENST00000367253 MITFO75030 526 aaPredicted RBP8.39□□□□□ -1.07
SYNE1-206ENST00000367253 SNRPB2P08579 225 aaKnown RBP8.39□□□□□ -1.07
SYNE1-206ENST00000367253 PSMA1P25786 263 aaKnown RBP8.39□□□□□ -1.07
SYNE1-206ENST00000367253 CD97P48960 835 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 RIPPLY1Q0D2K3 151 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 VMACQ2NL98 169 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 LRIT3Q3SXY7 679 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 KLHL22Q53GT1 634 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 TXNDC8Q6A555 127 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 DNM1P34Q6PK57 102 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 RFPL4BQ6ZWI9 263 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 AMIGO2Q86SJ2 522 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 GPSM1Q86YR5 675 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 SLC5A5Q92911 643 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 BSCL2Q96G97 398 aaPredicted RBP8.39□□□□□ -1.07
SYNE1-206ENST00000367253 TIMD4Q96H15 378 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 CASD1Q96PB1 797 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 LPAR4Q99677 370 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 TBL1YQ9BQ87 522 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 MOB1AQ9H8S9 216 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 PLCH1Q4KWH8 1693 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 A0A0A6YYH2 397 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 A6NJ64 397 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 PPEF2O14830 753 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 PROM1O43490 865 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 PLIN3O60664 434 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 CYTIPO60759 359 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 KCNJ13O60928 360 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 LRIG2O94898 1065 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 CST1P01037 141 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 PRKCGP05129 697 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 CYP3A4P08684 503 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 ASMTP46597 345 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 KLK7P49862 253 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 ENTPD1P49961 510 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 RHEBQ15382 184 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 MFSD7Q6UXD7 560 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 DET1Q7L5Y6 550 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 OR2L5Q8NG80 312 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 FBXW5Q969U6 566 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 INPP4AQ96PE3 977 aaPredicted RBP8.39□□□□□ -1.07
SYNE1-206ENST00000367253 SLC22A4Q9H015 551 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 PPA2Q9H2U2 334 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 PLEKHA1Q9HB21 404 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 MRPS30Q9NP92 439 aaKnown RBP8.39□□□□□ -1.07
SYNE1-206ENST00000367253 ADAMTS5Q9UNA0 930 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 ACTL7BQ9Y614 415 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 DOT1LQ8TEK3 1739 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 GLYATL1P3A0A0U1RQE8 302 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 hCG_1809904A0A1W2PP81 198 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 A0A1W2PPE2 198 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 A0A1W2PR64 198 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 A0A1W2PRV1 198 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 NIPSNAP2O75323 286 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 FAM163BP0C2L3 166 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 CCNB1P14635 433 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 CD9P21926 228 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 FBLP22087 321 aaKnown RBP8.39□□□□□ -1.07
SYNE1-206ENST00000367253 RELAQ04206 551 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 SLC3A1Q07837 685 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 TCTE1Q5JU00 501 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 CFAP77Q6ZQR2 320 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 GPALPP1Q8IXQ4 340 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 UBQLNLQ8IYU4 475 aa8.39□□□□□ -1.07
SYNE1-206ENST00000367253 PHF10Q8WUB8 498 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms