RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 GET4Q7L5D6 327 aaPredicted RBP9.04□□□□□ -0.96
VPS13A-203ENST00000360280 AVL9Q8NBF6 648 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 EXTL2Q9UBQ6 330 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 CNTNAP1P78357 1384 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 FER1L4A9Z1Z3 1794 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 HNRNPH3P31942 346 aaKnown RBP9.04□□□□□ -0.96
VPS13A-203ENST00000360280 DGKGP49619 791 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 PPM1JQ5JR12 505 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 UNQ6126/PRO20091Q6UXV3 157 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 ZNF367Q7RTV3 350 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 C12orf45Q8N5I9 185 aaPredicted RBP9.04□□□□□ -0.96
VPS13A-203ENST00000360280 IRGQQ8WZA9 623 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 CSPG4P5Q96PW8 444 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 SLC38A3Q99624 504 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 FEM1CQ96JP0 617 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 YIPF4Q9BSR8 244 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 OSBPL7Q9BZF2 842 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 DNTTIP1Q9H147 329 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 MS4A12Q9NXJ0 267 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 PRKACAP17612 351 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 YBEYP58557 167 aaPredicted RBP9.04□□□□□ -0.96
VPS13A-203ENST00000360280 POU4F2Q12837 409 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 FGL2Q14314 439 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 SAMD7Q7Z3H4 446 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 ZNF611Q8N823 705 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 DCBLD1Q8N8Z6 715 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 DRAXINQ8NBI3 349 aaPredicted RBP9.04□□□□□ -0.96
VPS13A-203ENST00000360280 OR6K2Q8NGY2 324 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 MTMR9Q96QG7 549 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 KCNJ13O60928 360 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 ZNF41P51814 821 aaPredicted RBP9.04□□□□□ -0.96
VPS13A-203ENST00000360280 HTD2P86397 168 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 MON1BQ7L1V2 547 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 ABHD5Q8WTS1 349 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 FRZBQ92765 325 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 ITM2CQ9NQX7 267 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 ZNF701Q9NV72 531 aaPredicted RBP9.04□□□□□ -0.96
VPS13A-203ENST00000360280 SLC7A8Q9UHI5 535 aa9.04□□□□□ -0.96
VPS13A-203ENST00000360280 FFAR2O15552 330 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 OR4F21O95013 312 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 SOX9P48436 509 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 SELENOVP59797 346 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 P4HA3Q7Z4N8 544 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 PIGWQ7Z7B1 504 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 BEST4Q8NFU0 473 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 A0A1W2PQ45 241 aaPredicted RBP9.03□□□□□ -0.96
VPS13A-203ENST00000360280 A0A1W2PQY0 241 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 K7EPI3 171 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 LGALS2P05162 132 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 KIAA0319LQ8IZA0 1049 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 AMBNQ9NP70 447 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 IQCF5A8MTL0 148 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 OIP5O43482 229 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 RBBP9O75884 186 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 PAHP00439 452 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 AMY2BP19961 511 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 GPR157Q5UAW9 335 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 KCT2Q8NC54 265 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 ASB6Q9NWX5 421 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 KLRF1Q9NZS2 232 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 HMX3A6NHT5 357 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 CXCL11O14625 94 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 SCAF4O95104 1147 aaKnown RBP9.03□□□□□ -0.96
VPS13A-203ENST00000360280 CLRN1P58418 232 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 PRAMEF18Q5VWM3 479 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 GSG1LQ6UXU4 331 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 CEP68Q76N32 757 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 SLC9B2Q86UD5 537 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 ZBTB26Q9HCK0 441 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 TMEM150BA6NC51 233 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 C9J4A7 227 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 ANKRD63C9JTQ0 380 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 NFATC1O95644 943 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 ZNF423Q2M1K9 1284 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 TMEM199Q8N511 208 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 BBS1Q8NFJ9 593 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 TWNKQ96RR1 684 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 HHATLQ9HCP6 504 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 OXSMQ9NWU1 459 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 AP1M2Q9Y6Q5 423 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 RNF13O43567 381 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 TCEA1P23193 301 aaKnown RBP9.03□□□□□ -0.96
VPS13A-203ENST00000360280 UGT2A3Q6UWM9 527 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 PLEKHG7Q6ZR37 379 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 HS3ST5Q8IZT8 346 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 C22orf15Q8WYQ4 148 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 BIRC8Q96P09 236 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 KCNMB3Q9NPA1 279 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 ADAMTS13Q76LX8 1427 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 A0A1W2PRB8 838 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 INSIG1O15503 277 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 DNAJB6O75190 326 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 ATE1O95260 518 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 WDPCPO95876 746 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 PSMD8P48556 350 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 MAB21L3Q8N8X9 362 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 PSD4Q8NDX1 1056 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 PIK3C2BO00750 1634 aa9.03□□□□□ -0.96
VPS13A-203ENST00000360280 EEF1E1O43324 174 aaKnown RBP9.03□□□□□ -0.96
VPS13A-203ENST00000360280 GOT2P00505 430 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms