RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 EME2A4GXA9 379 aaPredicted RBP20.93■□□□□ 0.94
HOXA4-201ENST00000360046 FLRT2O43155 660 aa20.93■□□□□ 0.94
HOXA4-201ENST00000360046 KIF1CO43896 1103 aaKnown RBP20.93■□□□□ 0.94
HOXA4-201ENST00000360046 PRAMEF10O60809 474 aa20.93■□□□□ 0.94
HOXA4-201ENST00000360046 CTSVO60911 334 aa20.93■□□□□ 0.94
HOXA4-201ENST00000360046 STATHP02808 62 aa20.93■□□□□ 0.94
HOXA4-201ENST00000360046 DIO3P55073 304 aa20.93■□□□□ 0.94
HOXA4-201ENST00000360046 EMX2Q04743 252 aa20.93■□□□□ 0.94
HOXA4-201ENST00000360046 MAD2L1Q13257 205 aaPredicted RBP20.93■□□□□ 0.94
HOXA4-201ENST00000360046 PROX2Q3B8N5 592 aa20.93■□□□□ 0.94
HOXA4-201ENST00000360046 PERM1Q5SV97 790 aa20.93■□□□□ 0.94
HOXA4-201ENST00000360046 USP53Q70EK8 1073 aa20.93■□□□□ 0.94
HOXA4-201ENST00000360046 MFSD9Q8NBP5 474 aa20.93■□□□□ 0.94
HOXA4-201ENST00000360046 SERPINI1Q99574 410 aa20.93■□□□□ 0.94
HOXA4-201ENST00000360046 SARGQ9BW04 601 aa20.93■□□□□ 0.94
HOXA4-201ENST00000360046 MRPL1Q9BYD6 325 aaKnown RBP20.93■□□□□ 0.94
HOXA4-201ENST00000360046 RAB33BQ9H082 229 aa20.93■□□□□ 0.94
HOXA4-201ENST00000360046 C1GALT1Q9NS00 363 aa20.93■□□□□ 0.94
HOXA4-201ENST00000360046 NOP53Q9NZM5 478 aaKnown RBP20.93■□□□□ 0.94
HOXA4-201ENST00000360046 UNC13CQ8NB66 2214 aa20.93■□□□□ 0.94
HOXA4-201ENST00000360046 A0A0J9YVX5 310 aa20.92■□□□□ 0.94
HOXA4-201ENST00000360046 SLC9B1P1A6NJY1 282 aa20.92■□□□□ 0.94
HOXA4-201ENST00000360046 SAP18O00422 153 aaKnown RBP20.92■□□□□ 0.94
HOXA4-201ENST00000360046 RASSF9O75901 435 aa20.92■□□□□ 0.94
HOXA4-201ENST00000360046 LDOC1O95751 146 aaPredicted RBP20.92■□□□□ 0.94
HOXA4-201ENST00000360046 CKMT1AP12532 417 aa20.92■□□□□ 0.94
HOXA4-201ENST00000360046 IDO1P14902 403 aa20.92■□□□□ 0.94
HOXA4-201ENST00000360046 PTX3P26022 381 aaPredicted RBP20.92■□□□□ 0.94
HOXA4-201ENST00000360046 AHRP35869 848 aa20.92■□□□□ 0.94
HOXA4-201ENST00000360046 ACSM2AQ08AH3 577 aa20.92■□□□□ 0.94
HOXA4-201ENST00000360046 SQLEQ14534 574 aa20.92■□□□□ 0.94
HOXA4-201ENST00000360046 RPS6KA2Q15349 733 aa20.92■□□□□ 0.94
HOXA4-201ENST00000360046 ZIC1Q15915 447 aa20.92■□□□□ 0.94
HOXA4-201ENST00000360046 ACSM2BQ68CK6 577 aa20.92■□□□□ 0.94
HOXA4-201ENST00000360046 DBX2Q6ZNG2 339 aa20.92■□□□□ 0.94
HOXA4-201ENST00000360046 PLXDC1Q8IUK5 500 aa20.92■□□□□ 0.94
HOXA4-201ENST00000360046 C19orf47Q8N9M1 422 aaKnown RBP20.92■□□□□ 0.94
HOXA4-201ENST00000360046 CNDP2Q96KP4 475 aaKnown RBP20.92■□□□□ 0.94
HOXA4-201ENST00000360046 TRAPPC9Q96Q05 1148 aa20.92■□□□□ 0.94
HOXA4-201ENST00000360046 ZNF385DQ9H6B1 395 aa20.92■□□□□ 0.94
HOXA4-201ENST00000360046 EPHA6Q9UF33 1036 aa20.92■□□□□ 0.94
HOXA4-201ENST00000360046 EIF3LQ9Y262 564 aaKnown RBP20.92■□□□□ 0.94
HOXA4-201ENST00000360046 AP1M2Q9Y6Q5 423 aa20.92■□□□□ 0.94
HOXA4-201ENST00000360046 CAPN7Q9Y6W3 813 aa20.92■□□□□ 0.94
HOXA4-201ENST00000360046 OTOGLQ3ZCN5 2332 aa20.92■□□□□ 0.94
HOXA4-201ENST00000360046 TLCD2A6NGC4 264 aa20.92■□□□□ 0.94
HOXA4-201ENST00000360046 C4orf47A7E2U8 309 aa20.92■□□□□ 0.94
HOXA4-201ENST00000360046 NDUFS4O43181 175 aa20.92■□□□□ 0.94
HOXA4-201ENST00000360046 UBOX5O94941 541 aa20.92■□□□□ 0.94
HOXA4-201ENST00000360046 GSTM2P28161 218 aa20.92■□□□□ 0.94
HOXA4-201ENST00000360046 CD1CP29017 333 aa20.92■□□□□ 0.94
HOXA4-201ENST00000360046 DUSP3P51452 185 aaPredicted RBP20.92■□□□□ 0.94
HOXA4-201ENST00000360046 NME5P56597 212 aa20.92■□□□□ 0.94
HOXA4-201ENST00000360046 SLC14A1Q13336 389 aa20.92■□□□□ 0.94
HOXA4-201ENST00000360046 SMU1Q2TAY7 513 aa20.92■□□□□ 0.94
HOXA4-201ENST00000360046 IL23RQ5VWK5 629 aa20.92■□□□□ 0.94
HOXA4-201ENST00000360046 FBXO42Q6P3S6 717 aa20.92■□□□□ 0.94
HOXA4-201ENST00000360046 CPSF7Q8N684 471 aaKnown RBP20.92■□□□□ 0.94
HOXA4-201ENST00000360046 TRPV3Q8NET8 790 aa20.92■□□□□ 0.94
HOXA4-201ENST00000360046 ZFYVE21Q9BQ24 234 aa20.92■□□□□ 0.94
HOXA4-201ENST00000360046 CCDC3Q9BQI4 270 aa20.92■□□□□ 0.94
HOXA4-201ENST00000360046 CCDC106Q9BWC9 280 aa20.92■□□□□ 0.94
HOXA4-201ENST00000360046 MS4A8Q9BY19 250 aa20.92■□□□□ 0.94
HOXA4-201ENST00000360046 AIG1Q9NVV5 245 aa20.92■□□□□ 0.94
HOXA4-201ENST00000360046 PPT2Q9UMR5 302 aa20.92■□□□□ 0.94
HOXA4-201ENST00000360046 NPIPB8E9PQR5 432 aa20.91■□□□□ 0.94
HOXA4-201ENST00000360046 CLEC3AO75596 197 aa20.91■□□□□ 0.94
HOXA4-201ENST00000360046 CSF2RBP32927 897 aa20.91■□□□□ 0.94
HOXA4-201ENST00000360046 GSTA3Q16772 222 aa20.91■□□□□ 0.94
HOXA4-201ENST00000360046 SPIN4Q56A73 249 aa20.91■□□□□ 0.94
HOXA4-201ENST00000360046 KHDRBS2Q5VWX1 349 aaKnown RBP20.91■□□□□ 0.94
HOXA4-201ENST00000360046 C1orf52Q8N6N3 182 aaKnown RBP20.91■□□□□ 0.94
HOXA4-201ENST00000360046 IFI44Q8TCB0 444 aa20.91■□□□□ 0.94
HOXA4-201ENST00000360046 CREB3L4Q8TEY5 395 aa20.91■□□□□ 0.94
HOXA4-201ENST00000360046 CD180Q99467 661 aa20.91■□□□□ 0.94
HOXA4-201ENST00000360046 MACROD1Q9BQ69 325 aa20.91■□□□□ 0.94
HOXA4-201ENST00000360046 SYNDIG1Q9H7V2 258 aa20.91■□□□□ 0.94
HOXA4-201ENST00000360046 SYNPO2LQ9H987 977 aa20.91■□□□□ 0.94
HOXA4-201ENST00000360046 MRGBPQ9NV56 204 aa20.91■□□□□ 0.94
HOXA4-201ENST00000360046 TMED5Q9Y3A6 229 aa20.91■□□□□ 0.94
HOXA4-201ENST00000360046 CASC3O15234 703 aaKnown RBP20.9■□□□□ 0.94
HOXA4-201ENST00000360046 SH3BP5O60239 455 aa20.9■□□□□ 0.94
HOXA4-201ENST00000360046 CD59P13987 128 aa20.9■□□□□ 0.94
HOXA4-201ENST00000360046 MAPK1P28482 360 aa20.9■□□□□ 0.94
HOXA4-201ENST00000360046 RAP1GDS1P52306 607 aa20.9■□□□□ 0.94
HOXA4-201ENST00000360046 TBL3Q12788 808 aaKnown RBP20.9■□□□□ 0.94
HOXA4-201ENST00000360046 KLF10Q13118 480 aa20.9■□□□□ 0.94
HOXA4-201ENST00000360046 CUL3Q13618 768 aa20.9■□□□□ 0.94
HOXA4-201ENST00000360046 KIAA0040Q15053 153 aa20.9■□□□□ 0.94
HOXA4-201ENST00000360046 CACHD1Q5VU97 1274 aa20.9■□□□□ 0.94
HOXA4-201ENST00000360046 CCDC121Q6ZUS5 278 aa20.9■□□□□ 0.94
HOXA4-201ENST00000360046 TREML1Q86YW5 311 aa20.9■□□□□ 0.94
HOXA4-201ENST00000360046 MIER2Q8N344 545 aa20.9■□□□□ 0.94
HOXA4-201ENST00000360046 F2RL3Q96RI0 385 aa20.9■□□□□ 0.94
HOXA4-201ENST00000360046 SOHLH2Q9NX45 425 aa20.9■□□□□ 0.94
HOXA4-201ENST00000360046 FTSJ1Q9UET6 329 aa20.9■□□□□ 0.94
HOXA4-201ENST00000360046 PILRAQ9UKJ1 303 aa20.9■□□□□ 0.94
HOXA4-201ENST00000360046 GDF9O60383 454 aa20.9■□□□□ 0.94
HOXA4-201ENST00000360046 MYO1DO94832 1006 aa20.9■□□□□ 0.94
HOXA4-201ENST00000360046 TBX6O95947 436 aaPredicted RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms