RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 PRPS1L1P21108 318 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 LRRC66Q68CR7 880 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 DCAKDQ8WVC6 231 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 CAMK1GQ96NX5 476 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 CGREF1Q99674 301 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 C14orf119Q9NWQ9 140 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 C12orf71A8MTZ7 269 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 SIRPB2Q5JXA9 342 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 FUT10Q6P4F1 479 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 SLC29A4Q7RTT9 530 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 NUDT13Q86X67 352 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 PDSS2Q86YH6 399 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 C4orf32Q8N8J7 132 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 PLD4Q96BZ4 506 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 KCNA7Q96RP8 456 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 RGCCQ9H4X1 137 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 TM9SF3Q9HD45 589 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 GRHPRQ9UBQ7 328 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 AQP12BA6NM10 295 aa15.58■□□□□ 0.09
COL18A1-203ENST00000359759 LAG3P18627 525 aa15.58■□□□□ 0.09
COL18A1-203ENST00000359759 MATN1P21941 496 aa15.58■□□□□ 0.09
COL18A1-203ENST00000359759 CDH11P55287 796 aa15.58■□□□□ 0.09
COL18A1-203ENST00000359759 RAB39AQ14964 217 aa15.58■□□□□ 0.09
COL18A1-203ENST00000359759 AQP12AQ8IXF9 295 aa15.58■□□□□ 0.09
COL18A1-203ENST00000359759 ALPK1Q96QP1 1244 aa15.58■□□□□ 0.09
COL18A1-203ENST00000359759 FZD3Q9NPG1 666 aa15.58■□□□□ 0.09
COL18A1-203ENST00000359759 UBQLN2Q9UHD9 624 aa15.58■□□□□ 0.09
COL18A1-203ENST00000359759 TAC3Q9UHF0 121 aa15.58■□□□□ 0.09
COL18A1-203ENST00000359759 COL1A2P08123 1366 aa15.58■□□□□ 0.09
COL18A1-203ENST00000359759 FARS2O95363 451 aaKnown RBP15.58■□□□□ 0.08
COL18A1-203ENST00000359759 EPCAMP16422 314 aa15.58■□□□□ 0.08
COL18A1-203ENST00000359759 OR1E2P47887 323 aa15.58■□□□□ 0.08
COL18A1-203ENST00000359759 SLC26A5P58743 744 aa15.58■□□□□ 0.08
COL18A1-203ENST00000359759 OLIG2Q13516 323 aa15.58■□□□□ 0.08
COL18A1-203ENST00000359759 FCAMRQ8WWV6 532 aa15.58■□□□□ 0.08
COL18A1-203ENST00000359759 STRA6Q9BX79 667 aa15.58■□□□□ 0.08
COL18A1-203ENST00000359759 APOBEC3GQ9HC16 384 aaKnown RBP15.58■□□□□ 0.08
COL18A1-203ENST00000359759 HTR3EA5X5Y0 456 aa15.58■□□□□ 0.08
COL18A1-203ENST00000359759 A8MT66 165 aa15.58■□□□□ 0.08
COL18A1-203ENST00000359759 M0R129 80 aa15.58■□□□□ 0.08
COL18A1-203ENST00000359759 TMEM63AO94886 807 aa15.58■□□□□ 0.08
COL18A1-203ENST00000359759 GOLGA7Q7Z5G4 137 aa15.58■□□□□ 0.08
COL18A1-203ENST00000359759 ZNF709Q8N972 641 aa15.58■□□□□ 0.08
COL18A1-203ENST00000359759 MRPL15Q9P015 296 aaKnown RBP15.58■□□□□ 0.08
COL18A1-203ENST00000359759 SLC2A6Q9UGQ3 507 aa15.58■□□□□ 0.08
COL18A1-203ENST00000359759 IFT52Q9Y366 437 aa15.58■□□□□ 0.08
COL18A1-203ENST00000359759 SLC22A2O15244 555 aa15.58■□□□□ 0.08
COL18A1-203ENST00000359759 PPP1R11O60927 126 aaPredicted RBP15.58■□□□□ 0.08
COL18A1-203ENST00000359759 TOXO94900 526 aa15.58■□□□□ 0.08
COL18A1-203ENST00000359759 BMP8BP34820 402 aa15.58■□□□□ 0.08
COL18A1-203ENST00000359759 PDGFRLQ15198 375 aa15.58■□□□□ 0.08
COL18A1-203ENST00000359759 BMP8AQ7Z5Y6 402 aa15.58■□□□□ 0.08
COL18A1-203ENST00000359759 PEX13Q92968 403 aa15.58■□□□□ 0.08
COL18A1-203ENST00000359759 OTUB2Q96DC9 234 aa15.58■□□□□ 0.08
COL18A1-203ENST00000359759 THUMPD1Q9NXG2 353 aaKnown RBP15.58■□□□□ 0.08
COL18A1-203ENST00000359759 DISP2A7MBM2 1401 aa15.58■□□□□ 0.08
COL18A1-203ENST00000359759 SLC7A4O43246 635 aa15.58■□□□□ 0.08
COL18A1-203ENST00000359759 CKMT1AP12532 417 aa15.58■□□□□ 0.08
COL18A1-203ENST00000359759 PRAMEF14Q5SWL7 426 aa15.58■□□□□ 0.08
COL18A1-203ENST00000359759 PRAMEF13Q5VWM6 474 aa15.58■□□□□ 0.08
COL18A1-203ENST00000359759 NOXRED1Q6NXP6 359 aa15.58■□□□□ 0.08
COL18A1-203ENST00000359759 PLA2G15Q8NCC3 412 aa15.58■□□□□ 0.08
COL18A1-203ENST00000359759 CARS2Q9HA77 564 aaKnown RBP15.58■□□□□ 0.08
COL18A1-203ENST00000359759 DUXAA6NLW8 204 aa15.57■□□□□ 0.08
COL18A1-203ENST00000359759 CSNK2A2P19784 350 aaPredicted RBP15.57■□□□□ 0.08
COL18A1-203ENST00000359759 VIPR1P32241 457 aa15.57■□□□□ 0.08
COL18A1-203ENST00000359759 SOX2P48431 317 aa15.57■□□□□ 0.08
COL18A1-203ENST00000359759 TMEM68Q96MH6 324 aa15.57■□□□□ 0.08
COL18A1-203ENST00000359759 ATPIF1Q9UII2 106 aa15.57■□□□□ 0.08
COL18A1-203ENST00000359759 M0QX08 132 aa15.57■□□□□ 0.08
COL18A1-203ENST00000359759 OR9I1Q8NGQ6 314 aa15.57■□□□□ 0.08
COL18A1-203ENST00000359759 BIRC7Q96CA5 298 aa15.57■□□□□ 0.08
COL18A1-203ENST00000359759 TMEM109Q9BVC6 243 aa15.57■□□□□ 0.08
COL18A1-203ENST00000359759 TSSK6Q9BXA6 273 aa15.57■□□□□ 0.08
COL18A1-203ENST00000359759 ZNF717Q9BY31 904 aaPredicted RBP15.57■□□□□ 0.08
COL18A1-203ENST00000359759 YJEFN3A6XGL0 299 aa15.57■□□□□ 0.08
COL18A1-203ENST00000359759 IL33O95760 270 aa15.57■□□□□ 0.08
COL18A1-203ENST00000359759 GSTT2P0CG29 244 aa15.57■□□□□ 0.08
COL18A1-203ENST00000359759 THEGLP0DJG4 465 aa15.57■□□□□ 0.08
COL18A1-203ENST00000359759 RPL10P27635 214 aaKnown RBP15.57■□□□□ 0.08
COL18A1-203ENST00000359759 GDF5P43026 501 aa15.57■□□□□ 0.08
COL18A1-203ENST00000359759 ZNF404Q494X3 552 aa15.57■□□□□ 0.08
COL18A1-203ENST00000359759 SMYD5Q6GMV2 418 aa15.57■□□□□ 0.08
COL18A1-203ENST00000359759 MSLNLQ96KJ4 702 aa15.57■□□□□ 0.08
COL18A1-203ENST00000359759 EEF1E1O43324 174 aaKnown RBP15.57■□□□□ 0.08
COL18A1-203ENST00000359759 GTF2F2P13984 249 aa15.57■□□□□ 0.08
COL18A1-203ENST00000359759 EDNRBP24530 442 aa15.57■□□□□ 0.08
COL18A1-203ENST00000359759 VARS2Q5ST30 1063 aaKnown RBP15.57■□□□□ 0.08
COL18A1-203ENST00000359759 FANK1Q8TC84 345 aa15.57■□□□□ 0.08
COL18A1-203ENST00000359759 PHOSPHO1Q8TCT1 267 aa15.57■□□□□ 0.08
COL18A1-203ENST00000359759 SCGB1C1Q8TD33 95 aa15.57■□□□□ 0.08
COL18A1-203ENST00000359759 SNX27Q96L92 541 aa15.57■□□□□ 0.08
COL18A1-203ENST00000359759 TBX18O95935 607 aa15.57■□□□□ 0.08
COL18A1-203ENST00000359759 HTR7P34969 479 aa15.57■□□□□ 0.08
COL18A1-203ENST00000359759 DAOAP59103 153 aa15.57■□□□□ 0.08
COL18A1-203ENST00000359759 TAS2R50P59544 299 aa15.57■□□□□ 0.08
COL18A1-203ENST00000359759 FBXO43Q4G163 708 aa15.57■□□□□ 0.08
COL18A1-203ENST00000359759 GDF6Q6KF10 455 aaPredicted RBP15.57■□□□□ 0.08
COL18A1-203ENST00000359759 SLC36A4Q6YBV0 504 aa15.57■□□□□ 0.08
COL18A1-203ENST00000359759 SLC16A9Q7RTY1 509 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms