RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 LGI1O95970 557 aa15.22■□□□□ 0.03
RTN3-205ENST00000356000 CNPP09543 421 aaKnown RBP15.22■□□□□ 0.03
RTN3-205ENST00000356000 OR56A5P0C7T3 313 aa15.22■□□□□ 0.03
RTN3-205ENST00000356000 TGM4P49221 684 aa15.22■□□□□ 0.03
RTN3-205ENST00000356000 BICRALQ6AI39 1079 aa15.22■□□□□ 0.03
RTN3-205ENST00000356000 SLC34A3Q8N130 599 aa15.22■□□□□ 0.03
RTN3-205ENST00000356000 OR11H7Q8NGC8 314 aa15.22■□□□□ 0.03
RTN3-205ENST00000356000 CREB3L4Q8TEY5 395 aa15.22■□□□□ 0.03
RTN3-205ENST00000356000 NXPE2Q96DL1 559 aa15.22■□□□□ 0.03
RTN3-205ENST00000356000 RBCK1Q9BYM8 510 aa15.22■□□□□ 0.03
RTN3-205ENST00000356000 NT5DC2Q9H857 520 aa15.22■□□□□ 0.03
RTN3-205ENST00000356000 EXOSC4Q9NPD3 245 aaKnown RBP15.22■□□□□ 0.03
RTN3-205ENST00000356000 BABAM2Q9NXR7 383 aa15.22■□□□□ 0.03
RTN3-205ENST00000356000 PURGQ9UJV8 347 aaKnown RBP15.22■□□□□ 0.03
RTN3-205ENST00000356000 PMS2P1A4D2B8 440 aa15.22■□□□□ 0.03
RTN3-205ENST00000356000 EIF1BO60739 113 aaKnown RBP15.22■□□□□ 0.03
RTN3-205ENST00000356000 CREG1O75629 220 aa15.22■□□□□ 0.03
RTN3-205ENST00000356000 CBX7O95931 251 aa15.22■□□□□ 0.03
RTN3-205ENST00000356000 FGF2P09038 288 aa15.22■□□□□ 0.03
RTN3-205ENST00000356000 SLC2A2P11168 524 aaPredicted RBP15.22■□□□□ 0.03
RTN3-205ENST00000356000 NCF1P14598 390 aaPredicted RBP15.22■□□□□ 0.03
RTN3-205ENST00000356000 EIF1P41567 113 aaKnown RBP15.22■□□□□ 0.03
RTN3-205ENST00000356000 ST3GAL4Q11206 333 aa15.22■□□□□ 0.03
RTN3-205ENST00000356000 GPR17Q13304 367 aa15.22■□□□□ 0.03
RTN3-205ENST00000356000 PTPRRQ15256 657 aa15.22■□□□□ 0.03
RTN3-205ENST00000356000 CDKL4Q5MAI5 379 aa15.22■□□□□ 0.03
RTN3-205ENST00000356000 IL31Q6EBC2 164 aa15.22■□□□□ 0.03
RTN3-205ENST00000356000 XRRA1Q6P2D8 792 aa15.22■□□□□ 0.03
RTN3-205ENST00000356000 FBXO46Q6PJ61 603 aaPredicted RBP15.22■□□□□ 0.03
RTN3-205ENST00000356000 ZDHHC21Q8IVQ6 265 aa15.22■□□□□ 0.03
RTN3-205ENST00000356000 CERS5Q8N5B7 392 aa15.22■□□□□ 0.03
RTN3-205ENST00000356000 OR6S1Q8NH40 331 aa15.22■□□□□ 0.03
RTN3-205ENST00000356000 KHSRPQ92945 711 aaKnown RBP eCLIP15.22■□□□□ 0.032e-6■■□□□ 11.6
RTN3-205ENST00000356000 POP5Q969H6 163 aaKnown RBP15.22■□□□□ 0.03
RTN3-205ENST00000356000 MTERF3Q96E29 417 aa15.22■□□□□ 0.03
RTN3-205ENST00000356000 PYURFQ96I23 114 aa15.22■□□□□ 0.03
RTN3-205ENST00000356000 ZNF436Q9C0F3 470 aaPredicted RBP15.22■□□□□ 0.03
RTN3-205ENST00000356000 SLC28A3Q9HAS3 691 aa15.22■□□□□ 0.03
RTN3-205ENST00000356000 BIN3Q9NQY0 253 aa15.22■□□□□ 0.03
RTN3-205ENST00000356000 ZNF222Q9UK12 451 aa15.22■□□□□ 0.03
RTN3-205ENST00000356000 LOC102723532A0A0G2JNH3 316 aa15.21■□□□□ 0.03
RTN3-205ENST00000356000 ZNF670-ZNF695F2Z2N8 137 aa15.21■□□□□ 0.03
RTN3-205ENST00000356000 LGALS8O00214 317 aa15.21■□□□□ 0.03
RTN3-205ENST00000356000 HPGDSO60760 199 aa15.21■□□□□ 0.03
RTN3-205ENST00000356000 FPR1P21462 350 aa15.21■□□□□ 0.03
RTN3-205ENST00000356000 PTPN3P26045 913 aa15.21■□□□□ 0.03
RTN3-205ENST00000356000 MAPK1P28482 360 aa15.21■□□□□ 0.03
RTN3-205ENST00000356000 SLC1A2P43004 574 aa15.21■□□□□ 0.03
RTN3-205ENST00000356000 SUPT20HL1Q3ZLR7 823 aa15.21■□□□□ 0.03
RTN3-205ENST00000356000 LDLRAD1Q5T700 205 aa15.21■□□□□ 0.03
RTN3-205ENST00000356000 OR2T5Q6IEZ7 315 aa15.21■□□□□ 0.03
RTN3-205ENST00000356000 MACC1Q6ZN28 852 aa15.21■□□□□ 0.03
RTN3-205ENST00000356000 LUZP2Q86TE4 346 aa15.21■□□□□ 0.03
RTN3-205ENST00000356000 C2CD4AQ8NCU7 369 aaPredicted RBP15.21■□□□□ 0.03
RTN3-205ENST00000356000 MCPH1Q8NEM0 835 aa15.21■□□□□ 0.03
RTN3-205ENST00000356000 ATP6V1C2Q8NEY4 427 aa15.21■□□□□ 0.03
RTN3-205ENST00000356000 OR2T29Q8NH02 315 aa15.21■□□□□ 0.03
RTN3-205ENST00000356000 PHOSPHO2Q8TCD6 241 aa15.21■□□□□ 0.03
RTN3-205ENST00000356000 NSMAFQ92636 917 aa15.21■□□□□ 0.03
RTN3-205ENST00000356000 TMEM209Q96SK2 561 aa15.21■□□□□ 0.03
RTN3-205ENST00000356000 PRMT7Q9NVM4 692 aaPredicted RBP15.21■□□□□ 0.03
RTN3-205ENST00000356000 PDP1Q9P0J1 537 aaPredicted RBP15.21■□□□□ 0.03
RTN3-205ENST00000356000 MLXQ9UH92 298 aa15.21■□□□□ 0.03
RTN3-205ENST00000356000 SPATA2Q9UM82 520 aa15.21■□□□□ 0.03
RTN3-205ENST00000356000 DNMT3AQ9Y6K1 912 aaPredicted RBP15.21■□□□□ 0.03
RTN3-205ENST00000356000 KCNK1O00180 336 aa15.21■□□□□ 0.03
RTN3-205ENST00000356000 VIPP01282 170 aa15.21■□□□□ 0.03
RTN3-205ENST00000356000 HLA-DOAP06340 250 aa15.21■□□□□ 0.03
RTN3-205ENST00000356000 CTPS1P17812 591 aa15.21■□□□□ 0.03
RTN3-205ENST00000356000 DNAJA1P31689 397 aaKnown RBP15.21■□□□□ 0.03
RTN3-205ENST00000356000 GSTM5P46439 218 aa15.21■□□□□ 0.03
RTN3-205ENST00000356000 FGL1Q08830 312 aa15.21■□□□□ 0.03
RTN3-205ENST00000356000 SF3A2Q15428 464 aaKnown RBP15.21■□□□□ 0.03
RTN3-205ENST00000356000 SGCAQ16586 387 aa15.21■□□□□ 0.03
RTN3-205ENST00000356000 DUOXA2Q1HG44 320 aa15.21■□□□□ 0.03
RTN3-205ENST00000356000 PCID2Q5JVF3 399 aa15.21■□□□□ 0.03
RTN3-205ENST00000356000 PRPF38BQ5VTL8 546 aaKnown RBP15.21■□□□□ 0.03
RTN3-205ENST00000356000 NANPQ8TBE9 248 aa15.21■□□□□ 0.03
RTN3-205ENST00000356000 COQ10AQ96MF6 247 aa15.21■□□□□ 0.03
RTN3-205ENST00000356000 SLAMF7Q9NQ25 335 aa15.21■□□□□ 0.03
RTN3-205ENST00000356000 VAPAQ9P0L0 249 aa15.21■□□□□ 0.03
RTN3-205ENST00000356000 A0A087WZ62 844 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 FAM74A7A6NL05 159 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 SERPINA1P01009 418 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 CYP17A1P05093 508 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 NOS2P35228 1153 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 ATXN1P54253 815 aaKnown RBP15.2■□□□□ 0.02
RTN3-205ENST00000356000 YWHAHQ04917 246 aaPredicted RBP15.2■□□□□ 0.02
RTN3-205ENST00000356000 GTF2H3Q13889 308 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 MED22Q15528 200 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 SLC14A2Q15849 920 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 TKFCQ3LXA3 575 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 FAM74A3Q4VXF1 159 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 MFSD14BQ5SR56 506 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 MANEALQ5VSG8 457 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 HSDL2Q6YN16 418 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 RAB44Q7Z6P3 723 aaPredicted RBP15.2■□□□□ 0.02
RTN3-205ENST00000356000 TMEM145Q8NBT3 493 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 OR4F6Q8NGB9 312 aa15.2■□□□□ 0.02
RTN3-205ENST00000356000 WDR36Q8NI36 951 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms