RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 CYP51A1Q16850 503 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 DPY19L1Q2PZI1 675 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 HENMT1Q5T8I9 393 aaKnown RBP9.77□□□□□ -0.85
SYNE1-203ENST00000354674 AGAP6Q5VW22 663 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 GTF2IRD2BQ6EKJ0 949 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 ZNF773Q6PK81 442 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 GTF2IRD2Q86UP8 949 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 ADHFE1Q8IWW8 467 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 MICU2Q8IYU8 434 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 AADATQ8N5Z0 425 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 FAM3CQ92520 227 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 TSPAN17Q96FV3 270 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 AGAP4Q96P64 663 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 SAV1Q9H4B6 383 aaPredicted RBP9.77□□□□□ -0.85
SYNE1-203ENST00000354674 C12orf10Q9HB07 376 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 USP22Q9UPT9 525 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 CRYL1Q9Y2S2 319 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 PCDHB3Q9Y5E6 796 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 SNX8Q9Y5X2 465 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 A0A087X1B8 175 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 TEX46H3BTG2 121 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 GPR39O43194 453 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 NDUFS3O75489 264 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 UPK1BO75841 260 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 CAPGP40121 348 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 SLC26A3P40879 764 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 WASP42768 502 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 HLCSP50747 726 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 B2MP61769 119 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 TFF2Q03403 129 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 CNTN1Q12860 1018 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 HIST2H2ACQ16777 129 aaPredicted RBP9.77□□□□□ -0.85
SYNE1-203ENST00000354674 DGUOKQ16854 277 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 SETMARQ53H47 684 aaPredicted RBP9.77□□□□□ -0.85
SYNE1-203ENST00000354674 CTSL3PQ5NE16 218 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 AGBL4Q5VU57 503 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 NRARPQ7Z6K4 114 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 CENPLQ8N0S6 344 aaPredicted RBP9.77□□□□□ -0.85
SYNE1-203ENST00000354674 ZBTB44Q8NCP5 570 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 IL17RDQ8NFM7 739 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 OR6Q1Q8NGQ2 317 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 RP9Q8TA86 221 aaKnown RBP9.77□□□□□ -0.85
SYNE1-203ENST00000354674 UBXN10Q96LJ8 280 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 GPR78Q96P69 363 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 ASB8Q9H765 288 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 ERVMER34-1Q9H9K5 563 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 TMPRSS11EQ9UL52 423 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 SNX5Q9Y5X3 404 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 LOC100506127A0A0U1RQW1 187 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 ISPDA4D126 451 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 MAN2B1O00754 1011 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 OR1I1O60431 355 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 UGT2B11O75310 529 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 KATNA1O75449 491 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 KLF8O95600 359 aaPredicted RBP9.76□□□□□ -0.85
SYNE1-203ENST00000354674 COL9A1P20849 921 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 RPS9P46781 194 aaKnown RBP9.76□□□□□ -0.85
SYNE1-203ENST00000354674 ARL13AQ5H913 290 aaPredicted RBP9.76□□□□□ -0.85
SYNE1-203ENST00000354674 CCNYL2Q5T2Q4 361 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 SEL1L3Q68CR1 1132 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 ZNF776Q68DI1 518 aaPredicted RBP9.76□□□□□ -0.85
SYNE1-203ENST00000354674 ZNF765Q7L2R6 523 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 STK32CQ86UX6 486 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 NLRP8Q86W28 1048 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 SERPINA9Q86WD7 417 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 NXPE1Q8N323 547 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 TMEM151AQ8N4L1 468 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 TXNDC5Q8NBS9 432 aaKnown RBP9.76□□□□□ -0.85
SYNE1-203ENST00000354674 TTLQ8NG68 377 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.76□□□□□ -0.85
SYNE1-203ENST00000354674 ULK4Q96C45 1275 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 SCYL1Q96KG9 808 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 USB1Q9BQ65 265 aaKnown RBP9.76□□□□□ -0.85
SYNE1-203ENST00000354674 SEC22CQ9BRL7 303 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 HDHD5Q9BXW7 423 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 ZBTB20Q9HC78 741 aaPredicted RBP9.76□□□□□ -0.85
SYNE1-203ENST00000354674 FANCFQ9NPI8 374 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 DYRK4Q9NR20 520 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 SMPD3Q9NY59 655 aaPredicted RBP9.76□□□□□ -0.85
SYNE1-203ENST00000354674 GIMAP2Q9UG22 337 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 SCML1Q9UN30 329 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 DHRS12A0PJE2 317 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 C19orf67A6NJJ6 358 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 MID1O15344 667 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 ESR1P03372 595 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 ELFN1P0C7U0 828 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 FASP25445 335 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 TAS2R38P59533 333 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 ZP2Q05996 745 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 GALNT1Q10472 559 aaPredicted RBP9.76□□□□□ -0.85
SYNE1-203ENST00000354674 TP53BP2Q13625 1128 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 MLF2Q15773 248 aaPredicted RBP9.76□□□□□ -0.85
SYNE1-203ENST00000354674 ATP13A5Q4VNC0 1218 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 TMEM207Q6UWW9 146 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 CFAP77Q6ZQR2 320 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 Q6ZVL8 140 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 TRAM1L1Q8N609 369 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 ANGPTL6Q8NI99 470 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 S100ZQ8WXG8 99 aa9.76□□□□□ -0.85
SYNE1-203ENST00000354674 FKBP10Q96AY3 582 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms