RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 VPS26BQ4G0F5 336 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 CTRB2Q6GPI1 263 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 PTCHD4Q6ZW05 846 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 TTLQ8NG68 377 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 ZNF384Q8TF68 577 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 COQ10AQ96MF6 247 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 HSPA12BQ96MM6 686 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 SDCBP2Q9H190 292 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 RNF39Q9H2S5 420 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 ADAMTS10Q9H324 1103 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 CD300AQ9UGN4 299 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 PCDHGA1Q9Y5H4 931 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 C3P01024 1663 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 POP4O95707 220 aaKnown RBP10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 EOMESO95936 686 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 CSF2P04141 144 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 MLLT6P55198 1093 aaPredicted RBP10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 MCCD1P59942 119 aaPredicted RBP10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 SOWAHAQ2M3V2 549 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 ZNF248Q8NDW4 579 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 ADAMTS15Q8TE58 950 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 ARMC5Q96C12 935 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 SLC25A51Q9H1U9 297 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 FOLH1BQ9HBA9 442 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 INTS7Q9NVH2 962 aaKnown RBP10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 SIRPGQ9P1W8 387 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 MRPS33Q9Y291 106 aaKnown RBP10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 STK16O75716 305 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 LCKP06239 509 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 SLC2A5P22732 501 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 MAP2K3P46734 347 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 POLR2JP52435 117 aaKnown RBP10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 CBLBQ13191 982 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 GTF2H2Q13888 395 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 GTF2H2CQ6P1K8 395 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 VWA5B2Q8N398 1253 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 DNASE1L2Q92874 299 aa10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 AJAP1Q9UKB5 411 aaPredicted RBP10.79□□□□□ -0.68
SMARCE1-202ENST00000348513 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 RLN2P04090 185 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 LHCGRP22888 699 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 L1CAMP32004 1257 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 CHRNA4P43681 627 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 GNPDA1P46926 289 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 TLE2Q04725 743 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 PMS2P3Q13401 168 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 FGFBP1Q14512 234 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 SVBPQ8N300 66 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 OR2T12Q8NG77 320 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 PLD4Q96BZ4 506 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 RASSF1Q9NS23 344 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 PAK1IP1Q9NWT1 392 aaPredicted RBP10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 ZDHHC7Q9NXF8 308 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 ICKQ9UPZ9 632 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 COLEC10Q9Y6Z7 277 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 CASC3O15234 703 aaKnown RBP10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 CLDN9O95484 217 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 MT-ND1P03886 318 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 RPS24P62847 133 aaKnown RBP10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 NKAPLQ5M9Q1 402 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 SYPL2Q5VXT5 272 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 ANKRD46Q86W74 232 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 CPNE9Q8IYJ1 553 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 JSRP1Q96MG2 331 aaPredicted RBP10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 NPLQ9BXD5 320 aaPredicted RBP10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 MAGEH1Q9H213 219 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 ZNF705GA8MUZ8 300 aaPredicted RBP10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 EI24O14681 340 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 FMO3P31513 532 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 YBEYP58557 167 aaPredicted RBP10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 RPS3AP61247 264 aaKnown RBP10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 HSPB3Q12988 150 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 PRKD1Q15139 912 aaPredicted RBP10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 MSANTD2Q6P1R3 559 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 RPTNQ6XPR3 784 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 PCDH19Q8TAB3 1148 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 SH3RF2Q8TEC5 729 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 LCN9Q8WX39 176 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 CCDC74AQ96AQ1 378 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 SLC6A17Q9H1V8 727 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 NOCTQ9UK39 431 aaKnown RBP10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 IRS2Q9Y4H2 1338 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 HCRTO43612 131 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 UGT2B17O75795 530 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 INMTO95050 263 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 ARHGAP1Q07960 439 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 FAM189A2Q15884 450 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 SPRED3Q2MJR0 410 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 CREB3L2Q70SY1 520 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 CYB5D2Q8WUJ1 264 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 STON2Q8WXE9 905 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 ZNF516Q92618 1163 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 KCNN1Q92952 543 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 ASB9Q96DX5 294 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 MROQ9BYG7 248 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 KCNN2Q9H2S1 579 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 SEMA3GQ9NS98 782 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 SAGE1Q9NXZ1 904 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 MOCS1Q9NZB8 636 aa10.78□□□□□ -0.68
SMARCE1-202ENST00000348513 CYB5R1Q9UHQ9 305 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms