RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 REPS1Q96D71 796 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 WDR34Q96EX3 536 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 ZNF285Q96NJ3 590 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 NT5DC2Q9H857 520 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 ENAMQ9NRM1 1142 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 GEMIN8Q9NWZ8 242 aaKnown RBP11.31□□□□□ -0.6
SNCA-202ENST00000345009 ADGRE2Q9UHX3 823 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 CDC14AQ9UNH5 594 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 LOC105369274A0A096LPK9 316 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 LOC102723532A0A0G2JNH3 316 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 FITM1A5D6W6 292 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 H3BQF6 201 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 MEN1O00255 615 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 E2F3O00716 465 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 PRPF4O43172 522 aaKnown RBP eCLIP11.3□□□□□ -0.6
SNCA-202ENST00000345009 RAD1O60671 282 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 SPAG7O75391 227 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 SIX3O95343 332 aaPredicted RBP11.3□□□□□ -0.6
SNCA-202ENST00000345009 CLDN9O95484 217 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 MLYCDO95822 493 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 OTCP00480 354 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 SERPIND1P05546 499 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 VARSP26640 1264 aaKnown RBP11.3□□□□□ -0.6
SNCA-202ENST00000345009 SERPINB1P30740 379 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 SCTRP47872 440 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 DNAJB13P59910 316 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 PHEXP78562 749 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 PRR20EP86478 221 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 PRR20CP86479 221 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 PRR20DP86480 221 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 PRR20BP86481 221 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 PRR20AP86496 221 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 REEP5Q00765 189 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 MEF2AQ02078 507 aaPredicted RBP11.3□□□□□ -0.6
SNCA-202ENST00000345009 DOC2AQ14183 400 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 SLBPQ14493 270 aaKnown RBP eCLIP11.3□□□□□ -0.6
SNCA-202ENST00000345009 RBBP7Q16576 425 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 C10orf62Q5T681 223 aaPredicted RBP11.3□□□□□ -0.6
SNCA-202ENST00000345009 BROXQ5VW32 411 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 FRMPD2BQ6IN97 320 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 NIPAL1Q6NVV3 410 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 MED27Q6P2C8 311 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 PRMT9Q6P2P2 845 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 GOLGA7Q7Z5G4 137 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 EXOC3L1Q86VI1 746 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 MYLK4Q86YV6 388 aaPredicted RBP11.3□□□□□ -0.6
SNCA-202ENST00000345009 PLD3Q8IV08 490 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 CACNA2D3Q8IZS8 1091 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 OR4N4Q8N0Y3 316 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 KDF1Q8NAX2 398 aaPredicted RBP11.3□□□□□ -0.6
SNCA-202ENST00000345009 GALNT6Q8NCL4 622 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 ARMC2Q8NEN0 867 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 TCP10LQ8TDR4 215 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 C1QTNF3Q9BXJ4 246 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 NOL11Q9H8H0 719 aaKnown RBP11.3□□□□□ -0.6
SNCA-202ENST00000345009 KCNK9Q9NPC2 374 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 CUTCQ9NTM9 273 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 NDOR1Q9UHB4 597 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 SH2B3Q9UQQ2 575 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 PCDHGA11Q9Y5H2 935 aa11.3□□□□□ -0.6
SNCA-202ENST00000345009 UQCRHLA0A096LP55 91 aa11.29□□□□□ -0.6
SNCA-202ENST00000345009 A0A1B0GX78 115 aa11.29□□□□□ -0.6
SNCA-202ENST00000345009 FEZF1A0PJY2 475 aa11.29□□□□□ -0.6
SNCA-202ENST00000345009 C9J4A7 227 aa11.29□□□□□ -0.6
SNCA-202ENST00000345009 TM9SF1O15321 606 aa11.29□□□□□ -0.6
SNCA-202ENST00000345009 NDUFS4O43181 175 aa11.29□□□□□ -0.6
SNCA-202ENST00000345009 HCRTR1O43613 425 aa11.29□□□□□ -0.6
SNCA-202ENST00000345009 LCMT2O60294 686 aaKnown RBP11.29□□□□□ -0.6
SNCA-202ENST00000345009 WFS1O76024 890 aa11.29□□□□□ -0.6
SNCA-202ENST00000345009 ZWINTO95229 277 aa11.29□□□□□ -0.6
SNCA-202ENST00000345009 TIAF1O95411 115 aa11.29□□□□□ -0.6
SNCA-202ENST00000345009 DLGAP3O95886 979 aa11.29□□□□□ -0.6
SNCA-202ENST00000345009 UQCRHP07919 91 aa11.29□□□□□ -0.6
SNCA-202ENST00000345009 SBK3P0C264 359 aa11.29□□□□□ -0.6
SNCA-202ENST00000345009 BCL6P41182 706 aa11.29□□□□□ -0.6
SNCA-202ENST00000345009 RPS15P62841 145 aaKnown RBP11.29□□□□□ -0.6
SNCA-202ENST00000345009 DCDP81605 110 aaKnown RBP11.29□□□□□ -0.6
SNCA-202ENST00000345009 TGM3Q08188 693 aa11.29□□□□□ -0.6
SNCA-202ENST00000345009 FAM53BQ14153 422 aa11.29□□□□□ -0.6
SNCA-202ENST00000345009 PRTGQ2VWP7 1150 aa11.29□□□□□ -0.6
SNCA-202ENST00000345009 TNFAIP8L3Q5GJ75 292 aa11.29□□□□□ -0.6
SNCA-202ENST00000345009 ZNF678Q5SXM1 525 aa11.29□□□□□ -0.6
SNCA-202ENST00000345009 LYPD8Q6UX82 237 aa11.29□□□□□ -0.6
SNCA-202ENST00000345009 TTLL10Q6ZVT0 673 aa11.29□□□□□ -0.6
SNCA-202ENST00000345009 MILR1Q7Z6M3 343 aa11.29□□□□□ -0.6
SNCA-202ENST00000345009 PROSER1Q86XN7 944 aa11.29□□□□□ -0.6
SNCA-202ENST00000345009 DTX1Q86Y01 620 aa11.29□□□□□ -0.6
SNCA-202ENST00000345009 CCNYL1Q8N7R7 359 aa11.29□□□□□ -0.6
SNCA-202ENST00000345009 MR1Q95460 341 aa11.29□□□□□ -0.6
SNCA-202ENST00000345009 NKD1Q969G9 470 aa11.29□□□□□ -0.6
SNCA-202ENST00000345009 PMEPA1Q969W9 287 aa11.29□□□□□ -0.6
SNCA-202ENST00000345009 L3HYPDHQ96EM0 354 aa11.29□□□□□ -0.6
SNCA-202ENST00000345009 MVB12AQ96EY5 273 aa11.29□□□□□ -0.6
SNCA-202ENST00000345009 FAM111AQ96PZ2 611 aa11.29□□□□□ -0.6
SNCA-202ENST00000345009 CENPKQ9BS16 269 aa11.29□□□□□ -0.6
SNCA-202ENST00000345009 NTMT1Q9BV86 223 aa11.29□□□□□ -0.6
SNCA-202ENST00000345009 GPR87Q9BY21 358 aa11.29□□□□□ -0.6
SNCA-202ENST00000345009 SPRY4Q9C004 299 aa11.29□□□□□ -0.6
SNCA-202ENST00000345009 TMBIM4Q9HC24 238 aa11.29□□□□□ -0.6
SNCA-202ENST00000345009 LHX9Q9NQ69 397 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms