RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 RNF130Q86XS8 419 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 KLHDC9Q8NEP7 349 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 PROKR1Q8TCW9 393 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 RFKQ969G6 155 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 TMCO6Q96DC7 493 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 CEP295NLQ96MC4 621 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 TRIB3Q96RU7 358 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 TTLL2Q9BWV7 592 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 AGPAT4Q9NRZ5 378 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 IL36AQ9UHA7 158 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 ST14Q9Y5Y6 855 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 SH3PXD2BA1X283 911 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 TMEM189-UBE2V1I3L0A0 370 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 SOX14O95416 240 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 IFNGP01579 166 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 RB1P06400 928 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 HLA-EP13747 358 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 HOXD9P28356 352 aaPredicted RBP6.96□□□□□ -1.3
VCAN-202ENST00000342785 SDC2P34741 201 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 NCBP2P52298 156 aaKnown RBP eCLIP6.96□□□□□ -1.3
VCAN-202ENST00000342785 TUBA1BP68363 451 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 LGALS3BPQ08380 585 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 TEAD2Q15562 447 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 LIPJQ5W064 366 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 TUBA1AQ71U36 451 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 VTCN1Q7Z7D3 282 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 CPA6Q8N4T0 437 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 MFSD2AQ8NA29 543 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 KLHL23Q8NBE8 558 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 AQP11Q8NBQ7 271 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 OR9A1PQ8NGU1 263 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 FNDC8Q8TC99 324 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 TMEM203Q969S6 136 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 C11orf24Q96F05 449 aaPredicted RBP6.96□□□□□ -1.3
VCAN-202ENST00000342785 REEP4Q9H6H4 257 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 WDR26Q9H7D7 661 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 TMEM30AQ9NV96 361 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 SOHLH2Q9NX45 425 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 PRKAB1Q9Y478 270 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 MITFO75030 526 aaPredicted RBP6.95□□□□□ -1.3
VCAN-202ENST00000342785 FGF18O76093 207 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 SLC6A4P31645 630 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 STAT5AP42229 794 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 NFATC3Q12968 1075 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 KCNC3Q14003 757 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 IL18Q14116 193 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 REEP3Q6NUK4 255 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 LRRTM4Q86VH4 590 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 CHERPQ8IWX8 916 aaKnown RBP6.95□□□□□ -1.3
VCAN-202ENST00000342785 NATD1Q8N6N6 113 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 KLHL6Q8WZ60 621 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 PIK3R3Q92569 461 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 TRMT61BQ9BVS5 477 aaKnown RBP6.95□□□□□ -1.3
VCAN-202ENST00000342785 UCK2Q9BZX2 261 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 ANKRA2Q9H9E1 313 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 SLAMF8Q9P0V8 285 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 COMMD3Q9UBI1 195 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 FABP12A6NFH5 140 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 CHST10O43529 356 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 LAMP1P11279 417 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 CPN2P22792 545 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 CD70P32970 193 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 ACTR1BP42025 376 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 RAB8AP61006 207 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 ACTR1AP61163 376 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 STXBP1P61764 594 aaKnown RBP6.95□□□□□ -1.3
VCAN-202ENST00000342785 ST3GAL4Q11206 333 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 PDGFRLQ15198 375 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 KLHL22Q53GT1 634 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.95□□□□□ -1.3
VCAN-202ENST00000342785 CRTC1Q6UUV9 634 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 HDDC2Q7Z4H3 204 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 PEX5LQ8IYB4 626 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 TMEM145Q8NBT3 493 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 FAM98AQ8NCA5 519 aaKnown RBP6.95□□□□□ -1.3
VCAN-202ENST00000342785 FRS2Q8WU20 508 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 RGMAQ96B86 450 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 RHBDF1Q96CC6 855 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 OMA1Q96E52 524 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 CAMK1GQ96NX5 476 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 CERS4Q9HA82 394 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 FARSBQ9NSD9 589 aaKnown RBP6.95□□□□□ -1.3
VCAN-202ENST00000342785 POLR1DQ9Y2S0 133 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 MAGED1Q9Y5V3 778 aaPredicted RBP6.95□□□□□ -1.3
VCAN-202ENST00000342785 CPSF4LA6NMK7 179 aaKnown RBP6.95□□□□□ -1.3
VCAN-202ENST00000342785 ARNTLO00327 626 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 MUSKO15146 869 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 TLX2O43763 284 aaPredicted RBP6.95□□□□□ -1.3
VCAN-202ENST00000342785 DHFRP00374 187 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 HLA-DQA2P01906 255 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 TIA1P31483 386 aaKnown RBP eCLIP6.95□□□□□ -1.3
VCAN-202ENST00000342785 HSD17B2P37059 387 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 MAP2K4P45985 399 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 CCT3P49368 545 aaKnown RBP6.95□□□□□ -1.3
VCAN-202ENST00000342785 TUBB3Q13509 450 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 LRRC32Q14392 662 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 CYP27C1Q4G0S4 372 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 CLEC12AQ5QGZ9 265 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 CXorf57Q6NSI4 855 aaKnown RBP6.95□□□□□ -1.3
VCAN-202ENST00000342785 SHQ1Q6PI26 577 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms