RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 NSMCE2Q96MF7 247 aa19.19■□□□□ 0.66
RTN1-202ENST00000342503 CCDC115Q96NT0 180 aa19.19■□□□□ 0.66
RTN1-202ENST00000342503 DUSP26Q9BV47 211 aa19.19■□□□□ 0.66
RTN1-202ENST00000342503 TBC1D29Q9UFV1 150 aa19.19■□□□□ 0.66
RTN1-202ENST00000342503 ADGRE2Q9UHX3 823 aa19.19■□□□□ 0.66
RTN1-202ENST00000342503 CYP8B1Q9UNU6 501 aa19.19■□□□□ 0.66
RTN1-202ENST00000342503 EXO1Q9UQ84 846 aaKnown RBP19.19■□□□□ 0.66
RTN1-202ENST00000342503 INVSQ9Y283 1065 aa19.19■□□□□ 0.66
RTN1-202ENST00000342503 ANKDD1BA6NHY2 528 aa19.18■□□□□ 0.66
RTN1-202ENST00000342503 HNRNPRO43390 633 aaKnown RBP19.18■□□□□ 0.66
RTN1-202ENST00000342503 CPSF4O95639 269 aaKnown RBP19.18■□□□□ 0.66
RTN1-202ENST00000342503 UMPSP11172 480 aa19.18■□□□□ 0.66
RTN1-202ENST00000342503 DGKEP52429 567 aa19.18■□□□□ 0.66
RTN1-202ENST00000342503 CYP4F2P78329 520 aa19.18■□□□□ 0.66
RTN1-202ENST00000342503 ZNF852Q6ZMS4 543 aa19.18■□□□□ 0.66
RTN1-202ENST00000342503 CALHM3Q86XJ0 350 aa19.18■□□□□ 0.66
RTN1-202ENST00000342503 CLECL1Q8IZS7 167 aa19.18■□□□□ 0.66
RTN1-202ENST00000342503 ICA1LQ8NDH6 482 aa19.18■□□□□ 0.66
RTN1-202ENST00000342503 CCL4L1Q8NHW4 92 aa19.18■□□□□ 0.66
RTN1-202ENST00000342503 C16orf78Q8WTQ4 265 aa19.18■□□□□ 0.66
RTN1-202ENST00000342503 PANX1Q96RD7 426 aa19.18■□□□□ 0.66
RTN1-202ENST00000342503 TBCDQ9BTW9 1192 aa19.18■□□□□ 0.66
RTN1-202ENST00000342503 KAT8Q9H7Z6 458 aaKnown RBP19.18■□□□□ 0.66
RTN1-202ENST00000342503 NT5DC2Q9H857 520 aa19.18■□□□□ 0.66
RTN1-202ENST00000342503 ANAPC2Q9UJX6 822 aa19.18■□□□□ 0.66
RTN1-202ENST00000342503 CA14Q9ULX7 337 aa19.18■□□□□ 0.66
RTN1-202ENST00000342503 COLQQ9Y215 455 aaPredicted RBP19.18■□□□□ 0.66
RTN1-202ENST00000342503 PCDHB11Q9Y5F2 797 aa19.18■□□□□ 0.66
RTN1-202ENST00000342503 HEBP2Q9Y5Z4 205 aa19.18■□□□□ 0.66
RTN1-202ENST00000342503 HS3ST3A1Q9Y663 406 aa19.18■□□□□ 0.66
RTN1-202ENST00000342503 HEATR5BQ9P2D3 2071 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 A0A1W2PPC1 479 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 TNFRSF10CO14798 259 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 GSTA4O15217 222 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 TBX6O95947 436 aaPredicted RBP19.17■□□□□ 0.66
RTN1-202ENST00000342503 IGLV3-19P01714 112 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 IGHV4-34P06331 123 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 KLK1P06870 262 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 ANXA6P08133 673 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 GZMMP51124 257 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 YPEL5P62699 121 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 PRDX1Q06830 199 aaKnown RBP19.17■□□□□ 0.66
RTN1-202ENST00000342503 MTX3Q5HYI7 312 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 ANO7Q6IWH7 933 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 ABRAXAS1Q6UWZ7 409 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 CAMKMTQ7Z624 323 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 TNIP2Q8NFZ5 429 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 OR2A1Q8NGT9 310 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.17■□□□□ 0.66
RTN1-202ENST00000342503 COQ8BQ96D53 544 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 C2orf42Q9NWW7 574 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 FANCMQ8IYD8 2048 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 ELOVL7A1L3X0 281 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 FAM220BPB1ANY3 271 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 RASGRP1O95267 797 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 EFNA1P20827 205 aaPredicted RBP19.17■□□□□ 0.66
RTN1-202ENST00000342503 POLE2P56282 527 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 SRP54P61011 504 aaKnown RBP19.17■□□□□ 0.66
RTN1-202ENST00000342503 CSNK1G2P78368 415 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 KIAA0895LQ68EN5 471 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 Q6ZSR6 202 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 SLC9B2Q86UD5 537 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 ZNF687Q8N1G0 1237 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 C10orf111Q8N326 155 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 TMEM145Q8NBT3 493 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 TRPV3Q8NET8 790 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 SNX19Q92543 992 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 FIG4Q92562 907 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 TOE1Q96GM8 510 aaKnown RBP19.17■□□□□ 0.66
RTN1-202ENST00000342503 PRPF18Q99633 342 aaKnown RBP19.17■□□□□ 0.66
RTN1-202ENST00000342503 SORBS1Q9BX66 1292 aaKnown RBP19.17■□□□□ 0.66
RTN1-202ENST00000342503 MS4A8Q9BY19 250 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 TMEM168Q9H0V1 697 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 REEP4Q9H6H4 257 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 KIR3DX1Q9H7L2 352 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 LMAN1LQ9HAT1 526 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 ATP6V1HQ9UI12 483 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 ERVK-11Q9UQG0 969 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 COLEC10Q9Y6Z7 277 aa19.17■□□□□ 0.66
RTN1-202ENST00000342503 IGKV1-8A0A0C4DH67 115 aa19.16■□□□□ 0.66
RTN1-202ENST00000342503 GMNNO75496 209 aa19.16■□□□□ 0.66
RTN1-202ENST00000342503 UQCRBP14927 111 aa19.16■□□□□ 0.66
RTN1-202ENST00000342503 SERPINB1P30740 379 aa19.16■□□□□ 0.66
RTN1-202ENST00000342503 GTF2A1P52655 376 aaPredicted RBP19.16■□□□□ 0.66
RTN1-202ENST00000342503 ALG11Q2TAA5 492 aa19.16■□□□□ 0.66
RTN1-202ENST00000342503 KHDRBS2Q5VWX1 349 aaKnown RBP19.16■□□□□ 0.66
RTN1-202ENST00000342503 IRGCQ6NXR0 463 aa19.16■□□□□ 0.66
RTN1-202ENST00000342503 WASH2PQ6VEQ5 465 aa19.16■□□□□ 0.66
RTN1-202ENST00000342503 ZNF621Q6ZSS3 439 aa19.16■□□□□ 0.66
RTN1-202ENST00000342503 SYT13Q7L8C5 426 aa19.16■□□□□ 0.66
RTN1-202ENST00000342503 MICU2Q8IYU8 434 aa19.16■□□□□ 0.66
RTN1-202ENST00000342503 PAPD5Q8NDF8 572 aaKnown RBP19.16■□□□□ 0.66
RTN1-202ENST00000342503 JPH3Q8WXH2 748 aaPredicted RBP19.16■□□□□ 0.66
RTN1-202ENST00000342503 EME1Q96AY2 570 aa19.16■□□□□ 0.66
RTN1-202ENST00000342503 CXorf40BQ96DE9 158 aa19.16■□□□□ 0.66
RTN1-202ENST00000342503 FAM120BQ96EK7 910 aaKnown RBP19.16■□□□□ 0.66
RTN1-202ENST00000342503 PITHD1Q9GZP4 211 aaPredicted RBP19.16■□□□□ 0.66
RTN1-202ENST00000342503 GORASP2Q9H8Y8 452 aa19.16■□□□□ 0.66
RTN1-202ENST00000342503 MYNNQ9NPC7 610 aa19.16■□□□□ 0.66
RTN1-202ENST00000342503 BTNL2Q9UIR0 455 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms