RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 RETSATQ6NUM9 610 aa17.91■□□□□ 0.46
SMPD1-201ENST00000342245 SERPINA11Q86U17 422 aa17.91■□□□□ 0.46
SMPD1-201ENST00000342245 NKAPQ8N5F7 415 aaKnown RBP17.91■□□□□ 0.46
SMPD1-201ENST00000342245 CLHC1Q8NHS4 586 aa17.91■□□□□ 0.46
SMPD1-201ENST00000342245 WDR36Q8NI36 951 aaKnown RBP17.91■□□□□ 0.46
SMPD1-201ENST00000342245 SLC16A10Q8TF71 515 aa17.91■□□□□ 0.46
SMPD1-201ENST00000342245 UPRTQ96BW1 309 aa17.91■□□□□ 0.46
SMPD1-201ENST00000342245 GSX2Q9BZM3 304 aa17.91■□□□□ 0.46
SMPD1-201ENST00000342245 MED28Q9H204 178 aa17.91■□□□□ 0.46
SMPD1-201ENST00000342245 HHATLQ9HCP6 504 aa17.91■□□□□ 0.46
SMPD1-201ENST00000342245 SIRT5Q9NXA8 310 aa17.91■□□□□ 0.46
SMPD1-201ENST00000342245 ASIC5Q9NY37 505 aa17.91■□□□□ 0.46
SMPD1-201ENST00000342245 NLKQ9UBE8 527 aa17.91■□□□□ 0.46
SMPD1-201ENST00000342245 ENOPH1Q9UHY7 261 aa17.91■□□□□ 0.46
SMPD1-201ENST00000342245 AP1M2Q9Y6Q5 423 aa17.91■□□□□ 0.46
SMPD1-201ENST00000342245 SLC30A4O14863 429 aa17.91■□□□□ 0.46
SMPD1-201ENST00000342245 PROS1P07225 676 aa17.91■□□□□ 0.46
SMPD1-201ENST00000342245 OGNP20774 298 aaKnown RBP17.91■□□□□ 0.46
SMPD1-201ENST00000342245 SDC2P34741 201 aa17.91■□□□□ 0.46
SMPD1-201ENST00000342245 NUP62P37198 522 aaPredicted RBP17.91■□□□□ 0.46
SMPD1-201ENST00000342245 BLVRAP53004 296 aa17.91■□□□□ 0.46
SMPD1-201ENST00000342245 POLR2GP62487 172 aaKnown RBP eCLIP17.91■□□□□ 0.46
SMPD1-201ENST00000342245 PPP3R1P63098 170 aa17.91■□□□□ 0.46
SMPD1-201ENST00000342245 VPS37AQ8NEZ2 397 aa17.91■□□□□ 0.46
SMPD1-201ENST00000342245 FANK1Q8TC84 345 aa17.91■□□□□ 0.46
SMPD1-201ENST00000342245 FUBP1Q96AE4 644 aaKnown RBP17.91■□□□□ 0.46
SMPD1-201ENST00000342245 PDGFDQ9GZP0 370 aaPredicted RBP17.91■□□□□ 0.46
SMPD1-201ENST00000342245 ELOVL6Q9H5J4 265 aa17.91■□□□□ 0.46
SMPD1-201ENST00000342245 FANCFQ9NPI8 374 aa17.91■□□□□ 0.46
SMPD1-201ENST00000342245 RBM22Q9NW64 420 aaKnown RBP eCLIP17.91■□□□□ 0.46
SMPD1-201ENST00000342245 RAB23Q9ULC3 237 aa17.91■□□□□ 0.46
SMPD1-201ENST00000342245 NDRG2Q9UN36 371 aaKnown RBP17.91■□□□□ 0.46
SMPD1-201ENST00000342245 DUSP12Q9UNI6 340 aa17.91■□□□□ 0.46
SMPD1-201ENST00000342245 NCKAP1Q9Y2A7 1128 aa17.91■□□□□ 0.46
SMPD1-201ENST00000342245 SGK494L7N484 410 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 RGS14O43566 566 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 FHP07954 510 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 CLEC2LP0C7M8 214 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 ANXA8P13928 327 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 CRYBB2P43320 205 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 CAMK1Q14012 370 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 IGSF11Q5DX21 431 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 NADSYN1Q6IA69 706 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 CATSPERGQ6ZRH7 1159 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 LDB1Q86U70 411 aaPredicted RBP17.9■□□□□ 0.46
SMPD1-201ENST00000342245 SLC44A2Q8IWA5 706 aaPredicted RBP17.9■□□□□ 0.46
SMPD1-201ENST00000342245 UBE2J2Q8N2K1 259 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 SRFBP1Q8NEF9 429 aaKnown RBP17.9■□□□□ 0.46
SMPD1-201ENST00000342245 NDRG1Q92597 394 aaKnown RBP17.9■□□□□ 0.46
SMPD1-201ENST00000342245 MTERF3Q96E29 417 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 AHCYL2Q96HN2 611 aaKnown RBP17.9■□□□□ 0.46
SMPD1-201ENST00000342245 DUSP16Q9BY84 665 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 GALNT9Q9HCQ5 603 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 MED9Q9NWA0 146 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 TAS2R13Q9NYV9 303 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 MARCH4Q9P2E8 410 aaPredicted RBP17.9■□□□□ 0.46
SMPD1-201ENST00000342245 CLCA3PQ9Y6N3 262 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 hCG_1807616A0A1W2PRN6 198 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 A8MVJ9 347 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 TP53P04637 393 aaPredicted RBP17.9■□□□□ 0.46
SMPD1-201ENST00000342245 HLA-DQB2P05538 268 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 OR56A5P0C7T3 313 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 SLC2A4P14672 509 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 PCSK2P16519 638 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 MAOBP27338 520 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 VLDLRP98155 873 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 FLYWCH1Q4VC44 716 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 RFTN2Q52LD8 501 aaPredicted RBP17.9■□□□□ 0.46
SMPD1-201ENST00000342245 HSD17B12Q53GQ0 312 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 KLHL22Q53GT1 634 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 SPANXN4Q5MJ08 99 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 TMEM107Q6UX40 140 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 RNF165Q6ZSG1 346 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 RRM2BQ7LG56 351 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 SLC34A3Q8N130 599 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 Q8N402 240 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 WDR48Q8TAF3 677 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 SH3RF2Q8TEC5 729 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 PHF21AQ96BD5 680 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 ZBED6CLQ96FA7 236 aaPredicted RBP17.9■□□□□ 0.46
SMPD1-201ENST00000342245 MED18Q9BUE0 208 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 SLC25A51Q9H1U9 297 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 ATXN3LQ9H3M9 355 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 OGDHLQ9ULD0 1010 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 ANKRD36A6QL64 1941 aa17.9■□□□□ 0.46
SMPD1-201ENST00000342245 E9PAM4 449 aa17.89■□□□□ 0.45
SMPD1-201ENST00000342245 QSOX1O00391 747 aa17.89■□□□□ 0.45
SMPD1-201ENST00000342245 E2F3O00716 465 aa17.89■□□□□ 0.45
SMPD1-201ENST00000342245 CHP2O43745 196 aa17.89■□□□□ 0.45
SMPD1-201ENST00000342245 SH3BP5O60239 455 aa17.89■□□□□ 0.45
SMPD1-201ENST00000342245 TGM6O95932 706 aa17.89■□□□□ 0.45
SMPD1-201ENST00000342245 ANXA3P12429 323 aa17.89■□□□□ 0.45
SMPD1-201ENST00000342245 IDH2P48735 452 aaKnown RBP17.89■□□□□ 0.45
SMPD1-201ENST00000342245 INPP1P49441 399 aa17.89■□□□□ 0.45
SMPD1-201ENST00000342245 HOXA1P49639 335 aaPredicted RBP17.89■□□□□ 0.45
SMPD1-201ENST00000342245 MAN2A2P49641 1150 aa17.89■□□□□ 0.45
SMPD1-201ENST00000342245 ERVPABLB-1P60509 514 aa17.89■□□□□ 0.45
SMPD1-201ENST00000342245 ZNF628Q5EBL2 1059 aa17.89■□□□□ 0.45
SMPD1-201ENST00000342245 RTL4Q6ZR62 310 aa17.89■□□□□ 0.45
SMPD1-201ENST00000342245 CBLL1Q75N03 491 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms