RNA–Protein interactions for RNA: ENST00000341990.8

CNTNAP3B-202, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-202ENST00000341990 C11orf24Q96F05 449 aaPredicted RBP19.24■□□□□ 0.67
CNTNAP3B-202ENST00000341990 ABCB10Q9NRK6 738 aa19.24■□□□□ 0.67
CNTNAP3B-202ENST00000341990 RAD18Q9NS91 495 aa19.24■□□□□ 0.67
CNTNAP3B-202ENST00000341990 E9PQ18 207 aa19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 EIF3FO00303 357 aaPredicted RBP19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 RFPL2O75678 378 aa19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 GBAP04062 536 aa19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 PREPP48147 710 aa19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 EPHB3P54753 998 aa19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 VEZF1Q14119 521 aa19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 COLEC12Q5KU26 742 aa19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 CPTPQ5TA50 214 aa19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 UBE2UQ5VVX9 321 aa19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 LINC00299Q6ZSB3 139 aa19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 Q6ZVU0 165 aa19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 SLC5A8Q8N695 610 aa19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 LMNTD1Q8N9Z9 388 aa19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 RHOXF1Q8NHV9 184 aa19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 FIBINQ8TAL6 211 aa19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 NDUFAF4Q9P032 175 aa19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 RUVBL1Q9Y265 456 aaKnown RBP19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 AIREO43918 545 aa19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 ANXA4P09525 319 aaPredicted RBP19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 MPC1LP0DKB6 136 aa19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 IDH2P48735 452 aaKnown RBP19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 HNRNPFP52597 415 aaKnown RBP19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 PTPN5P54829 565 aa19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 AP1S2P56377 157 aa19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 CSTF3Q12996 717 aaKnown RBP19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 CARTPTQ16568 116 aa19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 OR4K1Q8NGD4 311 aa19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 IPCEF1Q8WWN9 437 aaPredicted RBP19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 SLC38A4Q969I6 547 aa19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 DACH2Q96NX9 599 aa19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 EPYCQ99645 322 aa19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 SGK2Q9HBY8 427 aa19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 GPATCH2Q9NW75 528 aa19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 SH3BP4Q9P0V3 963 aa19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 LSM7Q9UK45 103 aaKnown RBP19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 ABT1Q9ULW3 272 aaKnown RBP19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 SLC6A14Q9UN76 642 aa19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 SH3BP1Q9Y3L3 701 aa19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 LYVE1Q9Y5Y7 322 aa19.23■□□□□ 0.67
CNTNAP3B-202ENST00000341990 CLDN24A6NM45 220 aa19.22■□□□□ 0.67
CNTNAP3B-202ENST00000341990 KDM1AO60341 852 aa19.22■□□□□ 0.67
CNTNAP3B-202ENST00000341990 SOD2P04179 222 aa19.22■□□□□ 0.67
CNTNAP3B-202ENST00000341990 EIF2DP41214 584 aaKnown RBP19.22■□□□□ 0.67
CNTNAP3B-202ENST00000341990 TMED10P49755 219 aaKnown RBP19.22■□□□□ 0.67
CNTNAP3B-202ENST00000341990 CRISP3P54108 245 aa19.22■□□□□ 0.67
CNTNAP3B-202ENST00000341990 PLEKHS1Q5SXH7 462 aa19.22■□□□□ 0.67
CNTNAP3B-202ENST00000341990 LIPJQ5W064 366 aa19.22■□□□□ 0.67
CNTNAP3B-202ENST00000341990 ITPKCQ96DU7 683 aa19.22■□□□□ 0.67
CNTNAP3B-202ENST00000341990 ABHD8Q96I13 439 aa19.22■□□□□ 0.67
CNTNAP3B-202ENST00000341990 PSD2Q9BQI7 771 aa19.22■□□□□ 0.67
CNTNAP3B-202ENST00000341990 GABARAPL3Q9BY60 117 aa19.22■□□□□ 0.67
CNTNAP3B-202ENST00000341990 C6orf62Q9GZU0 229 aaPredicted RBP19.22■□□□□ 0.67
CNTNAP3B-202ENST00000341990 GPR83Q9NYM4 423 aa19.22■□□□□ 0.67
CNTNAP3B-202ENST00000341990 PRMT3O60678 531 aa19.22■□□□□ 0.67
CNTNAP3B-202ENST00000341990 ETFAP13804 333 aa19.22■□□□□ 0.67
CNTNAP3B-202ENST00000341990 BDKRB1P46663 353 aa19.22■□□□□ 0.67
CNTNAP3B-202ENST00000341990 SP3Q02447 781 aa19.22■□□□□ 0.67
CNTNAP3B-202ENST00000341990 FADDQ13158 208 aa19.22■□□□□ 0.67
CNTNAP3B-202ENST00000341990 SP140Q13342 867 aa19.22■□□□□ 0.67
CNTNAP3B-202ENST00000341990 ZNF385BQ569K4 471 aa19.22■□□□□ 0.67
CNTNAP3B-202ENST00000341990 AGAP7PQ5VUJ5 663 aa19.22■□□□□ 0.67
CNTNAP3B-202ENST00000341990 ASTLQ6HA08 431 aaPredicted RBP19.22■□□□□ 0.67
CNTNAP3B-202ENST00000341990 Q6ZVL8 140 aa19.22■□□□□ 0.67
CNTNAP3B-202ENST00000341990 HSD11B1LQ7Z5J1 315 aa19.22■□□□□ 0.67
CNTNAP3B-202ENST00000341990 CPA6Q8N4T0 437 aa19.22■□□□□ 0.67
CNTNAP3B-202ENST00000341990 HTRA1Q92743 480 aa19.22■□□□□ 0.67
CNTNAP3B-202ENST00000341990 NIPSNAP1Q9BPW8 284 aa19.22■□□□□ 0.67
CNTNAP3B-202ENST00000341990 TMEM121BQ9BXQ6 578 aaPredicted RBP19.22■□□□□ 0.67
CNTNAP3B-202ENST00000341990 MIR1-1HGQ9H1L0 117 aa19.22■□□□□ 0.67
CNTNAP3B-202ENST00000341990 ADPRHL2Q9NX46 363 aa19.22■□□□□ 0.67
CNTNAP3B-202ENST00000341990 PSORS1C1Q9UIG5 152 aa19.22■□□□□ 0.67
CNTNAP3B-202ENST00000341990 PCDHGA4Q9Y5G9 962 aa19.22■□□□□ 0.67
CNTNAP3B-202ENST00000341990 SERTM1A2A2V5 107 aa19.21■□□□□ 0.67
CNTNAP3B-202ENST00000341990 PRAMEF25A6NGN4 478 aa19.21■□□□□ 0.67
CNTNAP3B-202ENST00000341990 CNOT3O75175 753 aaKnown RBP19.21■□□□□ 0.67
CNTNAP3B-202ENST00000341990 DBTP11182 482 aaKnown RBP19.21■□□□□ 0.67
CNTNAP3B-202ENST00000341990 HLA-EP13747 358 aa19.21■□□□□ 0.67
CNTNAP3B-202ENST00000341990 CRATP43155 626 aa19.21■□□□□ 0.67
CNTNAP3B-202ENST00000341990 SEPHS1P49903 392 aa19.21■□□□□ 0.67
CNTNAP3B-202ENST00000341990 CYP4F2P78329 520 aa19.21■□□□□ 0.67
CNTNAP3B-202ENST00000341990 TIGD6Q17RP2 521 aa19.21■□□□□ 0.67
CNTNAP3B-202ENST00000341990 MPPE1Q53F39 396 aa19.21■□□□□ 0.67
CNTNAP3B-202ENST00000341990 NPAS3Q8IXF0 933 aa19.21■□□□□ 0.67
CNTNAP3B-202ENST00000341990 TSEN34Q9BSV6 310 aaKnown RBP19.21■□□□□ 0.67
CNTNAP3B-202ENST00000341990 DOHHQ9BU89 302 aa19.21■□□□□ 0.67
CNTNAP3B-202ENST00000341990 SRRDQ9UH36 339 aa19.21■□□□□ 0.67
CNTNAP3B-202ENST00000341990 ZNF229Q9UJW7 825 aa19.21■□□□□ 0.67
CNTNAP3B-202ENST00000341990 EXO1Q9UQ84 846 aaKnown RBP19.21■□□□□ 0.67
CNTNAP3B-202ENST00000341990 PPIL1Q9Y3C6 166 aa19.21■□□□□ 0.67
CNTNAP3B-202ENST00000341990 PCDHGB3Q9Y5G1 929 aa19.21■□□□□ 0.67
CNTNAP3B-202ENST00000341990 OBSL1O75147 1896 aa19.21■□□□□ 0.67
CNTNAP3B-202ENST00000341990 LOC100506127A0A0U1RQW1 187 aa19.21■□□□□ 0.67
CNTNAP3B-202ENST00000341990 TNFRSF11BO00300 401 aa19.21■□□□□ 0.67
CNTNAP3B-202ENST00000341990 PQBP1O60828 265 aaKnown RBP19.21■□□□□ 0.67
CNTNAP3B-202ENST00000341990 PPIGQ13427 754 aaKnown RBP eCLIP19.21■□□□□ 0.67
CNTNAP3B-202ENST00000341990 AGTRAPQ6RW13 159 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms