RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 ONECUT2O95948 504 aa14.68□□□□□ -0.06
TNFRSF12A-202ENST00000341627 EPB42P16452 691 aa14.68□□□□□ -0.06
TNFRSF12A-202ENST00000341627 VARSP26640 1264 aaKnown RBP14.68□□□□□ -0.06
TNFRSF12A-202ENST00000341627 PIK3CGP48736 1102 aa14.68□□□□□ -0.06
TNFRSF12A-202ENST00000341627 IRF8Q02556 426 aa14.68□□□□□ -0.06
TNFRSF12A-202ENST00000341627 RGS1Q08116 209 aa14.68□□□□□ -0.06
TNFRSF12A-202ENST00000341627 LAPTM5Q13571 262 aa14.68□□□□□ -0.06
TNFRSF12A-202ENST00000341627 PWP1Q13610 501 aa14.68□□□□□ -0.06
TNFRSF12A-202ENST00000341627 COL9A2Q14055 689 aaPredicted RBP14.68□□□□□ -0.06
TNFRSF12A-202ENST00000341627 FAM53BQ14153 422 aa14.68□□□□□ -0.06
TNFRSF12A-202ENST00000341627 SLBPQ14493 270 aaKnown RBP eCLIP14.68□□□□□ -0.06
TNFRSF12A-202ENST00000341627 NAA30Q147X3 362 aaPredicted RBP14.68□□□□□ -0.06
TNFRSF12A-202ENST00000341627 RBBP5Q15291 538 aaKnown RBP14.68□□□□□ -0.06
TNFRSF12A-202ENST00000341627 PCBP2Q15366 365 aaKnown RBP eCLIP14.68□□□□□ -0.063e-6■■■■■ 27.7
TNFRSF12A-202ENST00000341627 TBR1Q16650 682 aa14.68□□□□□ -0.06
TNFRSF12A-202ENST00000341627 XKR6Q5GH73 641 aa14.68□□□□□ -0.06
TNFRSF12A-202ENST00000341627 ZNF843Q8N446 348 aa14.68□□□□□ -0.06
TNFRSF12A-202ENST00000341627 PTGR2Q8N8N7 351 aaPredicted RBP14.68□□□□□ -0.06
TNFRSF12A-202ENST00000341627 EXD3Q8N9H8 876 aa14.68□□□□□ -0.06
TNFRSF12A-202ENST00000341627 ZNF740Q8NDX6 193 aa14.68□□□□□ -0.06
TNFRSF12A-202ENST00000341627 TTLQ8NG68 377 aa14.68□□□□□ -0.06
TNFRSF12A-202ENST00000341627 OR2W6PQ8NHA6 318 aa14.68□□□□□ -0.06
TNFRSF12A-202ENST00000341627 EXTL1Q92935 676 aa14.68□□□□□ -0.06
TNFRSF12A-202ENST00000341627 COL26A1Q96A83 441 aa14.68□□□□□ -0.06
TNFRSF12A-202ENST00000341627 FKBP10Q96AY3 582 aa14.68□□□□□ -0.06
TNFRSF12A-202ENST00000341627 TM4SF19Q96DZ7 209 aa14.68□□□□□ -0.06
TNFRSF12A-202ENST00000341627 PTCD3Q96EY7 689 aaKnown RBP14.68□□□□□ -0.06
TNFRSF12A-202ENST00000341627 C10orf90Q96M02 699 aa14.68□□□□□ -0.06
TNFRSF12A-202ENST00000341627 RUFY1Q96T51 708 aa14.68□□□□□ -0.06
TNFRSF12A-202ENST00000341627 EFCAB11Q9BUY7 163 aa14.68□□□□□ -0.06
TNFRSF12A-202ENST00000341627 DRC3Q9H069 523 aa14.68□□□□□ -0.06
TNFRSF12A-202ENST00000341627 SPNS1Q9H2V7 528 aa14.68□□□□□ -0.06
TNFRSF12A-202ENST00000341627 ZNF304Q9HCX3 659 aa14.68□□□□□ -0.06
TNFRSF12A-202ENST00000341627 GEMIN8Q9NWZ8 242 aaKnown RBP14.68□□□□□ -0.06
TNFRSF12A-202ENST00000341627 ASB1Q9Y576 335 aa14.68□□□□□ -0.06
TNFRSF12A-202ENST00000341627 MRPS18BQ9Y676 258 aaKnown RBP14.68□□□□□ -0.06
TNFRSF12A-202ENST00000341627 A0A1W2PPM1 405 aa14.67□□□□□ -0.06
TNFRSF12A-202ENST00000341627 STX16-NPEPL1H3BU86 382 aa14.67□□□□□ -0.06
TNFRSF12A-202ENST00000341627 STX16O14662 325 aa14.67□□□□□ -0.06
TNFRSF12A-202ENST00000341627 NKX2-8O15522 239 aa14.67□□□□□ -0.06
TNFRSF12A-202ENST00000341627 NDUFS4O43181 175 aa14.67□□□□□ -0.06
TNFRSF12A-202ENST00000341627 GLRA3O75311 464 aa14.67□□□□□ -0.06
TNFRSF12A-202ENST00000341627 ERLIN1O75477 346 aa14.67□□□□□ -0.06
TNFRSF12A-202ENST00000341627 ALBP02768 609 aa14.67□□□□□ -0.06
TNFRSF12A-202ENST00000341627 STATHP02808 62 aa14.67□□□□□ -0.06
TNFRSF12A-202ENST00000341627 SERPIND1P05546 499 aa14.67□□□□□ -0.06
TNFRSF12A-202ENST00000341627 CAPN1P07384 714 aa14.67□□□□□ -0.06
TNFRSF12A-202ENST00000341627 ATXN8OSP0DMR3 200 aa14.67□□□□□ -0.06
TNFRSF12A-202ENST00000341627 TAC1P20366 129 aa14.67□□□□□ -0.06
TNFRSF12A-202ENST00000341627 GSTM2P28161 218 aa14.67□□□□□ -0.06
TNFRSF12A-202ENST00000341627 OR1D4P47884 311 aa14.67□□□□□ -0.06
TNFRSF12A-202ENST00000341627 AVPR1BP47901 424 aa14.67□□□□□ -0.06
TNFRSF12A-202ENST00000341627 CDC20Q12834 499 aa14.67□□□□□ -0.06
TNFRSF12A-202ENST00000341627 CHIT1Q13231 466 aa14.67□□□□□ -0.06
TNFRSF12A-202ENST00000341627 SLC9A5Q14940 896 aa14.67□□□□□ -0.06
TNFRSF12A-202ENST00000341627 TBCCQ15814 346 aa14.67□□□□□ -0.06
TNFRSF12A-202ENST00000341627 HIST2H2ACQ16777 129 aaPredicted RBP14.67□□□□□ -0.06
TNFRSF12A-202ENST00000341627 HIST2H2AA3Q6FI13 130 aa14.67□□□□□ -0.06
TNFRSF12A-202ENST00000341627 C16orf46Q6P387 395 aa14.67□□□□□ -0.06
TNFRSF12A-202ENST00000341627 TMIGD1Q6UXZ0 262 aa14.67□□□□□ -0.06
TNFRSF12A-202ENST00000341627 METTL27Q8N6F8 245 aaPredicted RBP14.67□□□□□ -0.06
TNFRSF12A-202ENST00000341627 TEX9Q8N6V9 391 aa14.67□□□□□ -0.06
TNFRSF12A-202ENST00000341627 TRPV3Q8NET8 790 aa14.67□□□□□ -0.06
TNFRSF12A-202ENST00000341627 WDR34Q96EX3 536 aa14.67□□□□□ -0.06
TNFRSF12A-202ENST00000341627 SEC16BQ96JE7 1060 aa14.67□□□□□ -0.06
TNFRSF12A-202ENST00000341627 CATSPER2Q96P56 530 aa14.67□□□□□ -0.06
TNFRSF12A-202ENST00000341627 NT5DC2Q9H857 520 aa14.67□□□□□ -0.06
TNFRSF12A-202ENST00000341627 TMEM216Q9P0N5 145 aa14.67□□□□□ -0.06
TNFRSF12A-202ENST00000341627 TCFL5Q9UL49 500 aa14.67□□□□□ -0.06
TNFRSF12A-202ENST00000341627 MAU2Q9Y6X3 613 aa14.67□□□□□ -0.06
TNFRSF12A-202ENST00000341627 BOD1L1Q8NFC6 3051 aa14.67□□□□□ -0.06
TNFRSF12A-202ENST00000341627 URADA6NGE7 173 aa14.66□□□□□ -0.06
TNFRSF12A-202ENST00000341627 MED26O95402 600 aa14.66□□□□□ -0.06
TNFRSF12A-202ENST00000341627 PRKAR1AP10644 381 aa14.66□□□□□ -0.06
TNFRSF12A-202ENST00000341627 ITGAXP20702 1163 aa14.66□□□□□ -0.06
TNFRSF12A-202ENST00000341627 FBLP22087 321 aaKnown RBP14.66□□□□□ -0.06
TNFRSF12A-202ENST00000341627 CCT5P48643 541 aa14.66□□□□□ -0.06
TNFRSF12A-202ENST00000341627 RPS18P62269 152 aaKnown RBP14.66□□□□□ -0.06
TNFRSF12A-202ENST00000341627 SKP1P63208 163 aa14.66□□□□□ -0.06
TNFRSF12A-202ENST00000341627 DOC2AQ14183 400 aa14.66□□□□□ -0.06
TNFRSF12A-202ENST00000341627 ERV3-1Q14264 604 aa14.66□□□□□ -0.06
TNFRSF12A-202ENST00000341627 TMEM214Q6NUQ4 689 aaKnown RBP14.66□□□□□ -0.06
TNFRSF12A-202ENST00000341627 MRPL14Q6P1L8 145 aaKnown RBP14.66□□□□□ -0.06
TNFRSF12A-202ENST00000341627 OVCH1Q7RTY7 1134 aa14.66□□□□□ -0.06
TNFRSF12A-202ENST00000341627 CYP4X1Q8N118 509 aa14.66□□□□□ -0.06
TNFRSF12A-202ENST00000341627 ARHGEF39Q8N4T4 335 aa14.66□□□□□ -0.06
TNFRSF12A-202ENST00000341627 NT5CQ8TCD5 201 aa14.66□□□□□ -0.06
TNFRSF12A-202ENST00000341627 UBE2E3Q969T4 207 aa14.66□□□□□ -0.06
TNFRSF12A-202ENST00000341627 PHF21BQ96EK2 531 aa14.66□□□□□ -0.06
TNFRSF12A-202ENST00000341627 MACROD1Q9BQ69 325 aa14.66□□□□□ -0.06
TNFRSF12A-202ENST00000341627 ANKHQ9HCJ1 492 aa14.66□□□□□ -0.06
TNFRSF12A-202ENST00000341627 SLC22A11Q9NSA0 550 aa14.66□□□□□ -0.06
TNFRSF12A-202ENST00000341627 COPG2Q9UBF2 871 aa14.66□□□□□ -0.06
TNFRSF12A-202ENST00000341627 NXT1Q9UKK6 140 aaKnown RBP14.66□□□□□ -0.06
TNFRSF12A-202ENST00000341627 PLAAQ9Y263 795 aa14.66□□□□□ -0.06
TNFRSF12A-202ENST00000341627 ZNF462Q96JM2 2506 aa14.66□□□□□ -0.06
TNFRSF12A-202ENST00000341627 A0A0A6YYC8 382 aaPredicted RBP14.65□□□□□ -0.06
TNFRSF12A-202ENST00000341627 CDC14CA4D256 554 aa14.65□□□□□ -0.06
TNFRSF12A-202ENST00000341627 ANKDD1BA6NHY2 528 aa14.65□□□□□ -0.06
TNFRSF12A-202ENST00000341627 I3L1I5 382 aaPredicted RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms