RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 FAM187AA6NFU0 413 aa16.12■□□□□ 0.17
BRCC3-202ENST00000340647 C4orf51C9J302 202 aa16.12■□□□□ 0.17
BRCC3-202ENST00000340647 MAP2K7O14733 419 aa16.12■□□□□ 0.17
BRCC3-202ENST00000340647 VPS4BO75351 444 aa16.12■□□□□ 0.17
BRCC3-202ENST00000340647 IPO13O94829 963 aaKnown RBP16.12■□□□□ 0.17
BRCC3-202ENST00000340647 ALPPP05187 535 aa16.12■□□□□ 0.17
BRCC3-202ENST00000340647 SAT1P21673 171 aa16.12■□□□□ 0.17
BRCC3-202ENST00000340647 CCND1P24385 295 aa16.12■□□□□ 0.17
BRCC3-202ENST00000340647 ETF1P62495 437 aaKnown RBP16.12■□□□□ 0.17
BRCC3-202ENST00000340647 HYAL2Q12891 473 aa16.12■□□□□ 0.17
BRCC3-202ENST00000340647 EIF2S3LQ2VIR3 472 aaKnown RBP16.12■□□□□ 0.17
BRCC3-202ENST00000340647 AGAP7PQ5VUJ5 663 aa16.12■□□□□ 0.17
BRCC3-202ENST00000340647 HIST2H2BCQ6DN03 193 aa16.12■□□□□ 0.17
BRCC3-202ENST00000340647 ZDHHC24Q6UX98 284 aa16.12■□□□□ 0.17
BRCC3-202ENST00000340647 CAPN12Q6ZSI9 719 aa16.12■□□□□ 0.17
BRCC3-202ENST00000340647 LANCL3Q6ZV70 420 aa16.12■□□□□ 0.17
BRCC3-202ENST00000340647 ASPGQ86U10 573 aa16.12■□□□□ 0.17
BRCC3-202ENST00000340647 PALM2Q8IXS6 379 aa16.12■□□□□ 0.17
BRCC3-202ENST00000340647 EFCAB3Q8N7B9 438 aa16.12■□□□□ 0.17
BRCC3-202ENST00000340647 ANKRD53Q8N9V6 530 aa16.12■□□□□ 0.17
BRCC3-202ENST00000340647 OR5T3Q8NGG3 340 aa16.12■□□□□ 0.17
BRCC3-202ENST00000340647 OR51Q1Q8NH59 317 aa16.12■□□□□ 0.17
BRCC3-202ENST00000340647 GABPB2Q8TAK5 448 aaPredicted RBP16.12■□□□□ 0.17
BRCC3-202ENST00000340647 ZCCHC10Q8TBK6 192 aa16.12■□□□□ 0.17
BRCC3-202ENST00000340647 PPP4R1Q8TF05 950 aa16.12■□□□□ 0.17
BRCC3-202ENST00000340647 SLC13A3Q8WWT9 602 aa16.12■□□□□ 0.17
BRCC3-202ENST00000340647 VPS39Q96JC1 886 aa16.12■□□□□ 0.17
BRCC3-202ENST00000340647 AGAP4Q96P64 663 aa16.12■□□□□ 0.17
BRCC3-202ENST00000340647 YIPF2Q9BWQ6 316 aa16.12■□□□□ 0.17
BRCC3-202ENST00000340647 ZNF700Q9H0M5 742 aa16.12■□□□□ 0.17
BRCC3-202ENST00000340647 RHOJQ9H4E5 214 aa16.12■□□□□ 0.17
BRCC3-202ENST00000340647 C14orf105Q9NVL8 296 aa16.12■□□□□ 0.17
BRCC3-202ENST00000340647 VPS4AQ9UN37 437 aa16.12■□□□□ 0.17
BRCC3-202ENST00000340647 IGHV3-20A0A0C4DH32 117 aa16.11■□□□□ 0.17
BRCC3-202ENST00000340647 TCRBV9S1A1TA0A576 114 aa16.11■□□□□ 0.17
BRCC3-202ENST00000340647 PRAMEF4O60810 478 aa16.11■□□□□ 0.17
BRCC3-202ENST00000340647 ENO2P09104 434 aaPredicted RBP16.11■□□□□ 0.17
BRCC3-202ENST00000340647 HIST1H2AGP0C0S8 130 aaPredicted RBP16.11■□□□□ 0.17
BRCC3-202ENST00000340647 ITGAMP11215 1152 aa16.11■□□□□ 0.17
BRCC3-202ENST00000340647 HIST1H2ADP20671 130 aa16.11■□□□□ 0.17
BRCC3-202ENST00000340647 SCTRP47872 440 aa16.11■□□□□ 0.17
BRCC3-202ENST00000340647 MFAP5Q13361 173 aa16.11■□□□□ 0.17
BRCC3-202ENST00000340647 TSNQ15631 228 aaKnown RBP16.11■□□□□ 0.17
BRCC3-202ENST00000340647 PRAMEF9Q5VWM5 478 aa16.11■□□□□ 0.17
BRCC3-202ENST00000340647 B3GNTL1Q67FW5 361 aaPredicted RBP16.11■□□□□ 0.17
BRCC3-202ENST00000340647 LINC00696Q6ZRV3 163 aa16.11■□□□□ 0.17
BRCC3-202ENST00000340647 ZNF572Q7Z3I7 529 aaPredicted RBP16.11■□□□□ 0.17
BRCC3-202ENST00000340647 IQCKQ8N0W5 287 aa16.11■□□□□ 0.17
BRCC3-202ENST00000340647 ZADH2Q8N4Q0 377 aa16.11■□□□□ 0.17
BRCC3-202ENST00000340647 BRIX1Q8TDN6 353 aaKnown RBP16.11■□□□□ 0.17
BRCC3-202ENST00000340647 ANKRD7Q92527 254 aa16.11■□□□□ 0.17
BRCC3-202ENST00000340647 HIST1H2AHQ96KK5 128 aa16.11■□□□□ 0.17
BRCC3-202ENST00000340647 TSNARE1Q96NA8 513 aa16.11■□□□□ 0.17
BRCC3-202ENST00000340647 HIST1H2AJQ99878 128 aa16.11■□□□□ 0.17
BRCC3-202ENST00000340647 HAUS8Q9BT25 410 aa16.11■□□□□ 0.17
BRCC3-202ENST00000340647 H2AFJQ9BTM1 129 aa16.11■□□□□ 0.17
BRCC3-202ENST00000340647 UNKQ9C0B0 810 aaKnown RBP16.11■□□□□ 0.17
BRCC3-202ENST00000340647 CAB39LQ9H9S4 337 aa16.11■□□□□ 0.17
BRCC3-202ENST00000340647 SAYSD1Q9NPB0 183 aa16.11■□□□□ 0.17
BRCC3-202ENST00000340647 LANCL2Q9NS86 450 aa16.11■□□□□ 0.17
BRCC3-202ENST00000340647 HCN3Q9P1Z3 774 aa16.11■□□□□ 0.17
BRCC3-202ENST00000340647 MKL2Q9ULH7 1088 aa16.11■□□□□ 0.17
BRCC3-202ENST00000340647 SLC22A14Q9Y267 594 aa16.11■□□□□ 0.17
BRCC3-202ENST00000340647 SLC22A7Q9Y694 548 aa16.11■□□□□ 0.17
BRCC3-202ENST00000340647 UNC79Q9P2D8 2635 aa16.1■□□□□ 0.17
BRCC3-202ENST00000340647 NSG1A0A0A6YYJ2 146 aa16.1■□□□□ 0.17
BRCC3-202ENST00000340647 TRBC2A0A5B9 178 aa16.1■□□□□ 0.17
BRCC3-202ENST00000340647 ZNF860A6NHJ4 632 aa16.1■□□□□ 0.17
BRCC3-202ENST00000340647 FAM159BA6NKW6 160 aa16.1■□□□□ 0.17
BRCC3-202ENST00000340647 PRPF4O43172 522 aaKnown RBP eCLIP16.1■□□□□ 0.17
BRCC3-202ENST00000340647 RDH16O75452 317 aa16.1■□□□□ 0.17
BRCC3-202ENST00000340647 HEXBP07686 556 aa16.1■□□□□ 0.17
BRCC3-202ENST00000340647 ANXA5P08758 320 aa16.1■□□□□ 0.17
BRCC3-202ENST00000340647 SMIM10L1P0DMW3 83 aa16.1■□□□□ 0.17
BRCC3-202ENST00000340647 AVPR1BP47901 424 aa16.1■□□□□ 0.17
BRCC3-202ENST00000340647 SLC6A12P48065 614 aa16.1■□□□□ 0.17
BRCC3-202ENST00000340647 CCR8P51685 355 aa16.1■□□□□ 0.17
BRCC3-202ENST00000340647 NR6A1Q15406 480 aa16.1■□□□□ 0.17
BRCC3-202ENST00000340647 NDUFA9Q16795 377 aa16.1■□□□□ 0.17
BRCC3-202ENST00000340647 ISLR2Q6UXK2 745 aa16.1■□□□□ 0.17
BRCC3-202ENST00000340647 SYT10Q6XYQ8 523 aa16.1■□□□□ 0.17
BRCC3-202ENST00000340647 CYS1Q717R9 158 aa16.1■□□□□ 0.17
BRCC3-202ENST00000340647 THOC6Q86W42 341 aaKnown RBP16.1■□□□□ 0.17
BRCC3-202ENST00000340647 KLHDC8AQ8IYD2 350 aa16.1■□□□□ 0.17
BRCC3-202ENST00000340647 SPATA6LQ8N4H0 392 aa16.1■□□□□ 0.17
BRCC3-202ENST00000340647 CAMKVQ8NCB2 501 aa16.1■□□□□ 0.17
BRCC3-202ENST00000340647 SLC5A11Q8WWX8 675 aa16.1■□□□□ 0.17
BRCC3-202ENST00000340647 SMIM10Q96HG1 83 aa16.1■□□□□ 0.17
BRCC3-202ENST00000340647 LMF1Q96S06 567 aa16.1■□□□□ 0.17
BRCC3-202ENST00000340647 CYTH2Q99418 400 aa16.1■□□□□ 0.17
BRCC3-202ENST00000340647 PLA2G3Q9NZ20 509 aa16.1■□□□□ 0.17
BRCC3-202ENST00000340647 NAALAD2Q9Y3Q0 740 aa16.1■□□□□ 0.17
BRCC3-202ENST00000340647 OARD1Q9Y530 152 aa16.1■□□□□ 0.17
BRCC3-202ENST00000340647 E2F3O00716 465 aa16.09■□□□□ 0.17
BRCC3-202ENST00000340647 TAPBPO15533 448 aa16.09■□□□□ 0.17
BRCC3-202ENST00000340647 OR1F1O43749 312 aa16.09■□□□□ 0.17
BRCC3-202ENST00000340647 KLHL41O60662 606 aa16.09■□□□□ 0.17
BRCC3-202ENST00000340647 TBX6O95947 436 aaPredicted RBP16.09■□□□□ 0.17
BRCC3-202ENST00000340647 SERPINA7P05543 415 aa16.09■□□□□ 0.17
BRCC3-202ENST00000340647 GDF5P43026 501 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms