RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 NPEPPSL1A6NEC2 478 aa14.58□□□□□ -0.08
BRAT1-201ENST00000340611 RECQL5O94762 991 aaPredicted RBP14.58□□□□□ -0.08
BRAT1-201ENST00000340611 SLC25A14O95258 325 aaPredicted RBP14.58□□□□□ -0.08
BRAT1-201ENST00000340611 WISP3O95389 354 aaPredicted RBP14.58□□□□□ -0.08
BRAT1-201ENST00000340611 HSPA14Q0VDF9 509 aa14.58□□□□□ -0.08
BRAT1-201ENST00000340611 BNIP2Q12982 314 aa14.58□□□□□ -0.08
BRAT1-201ENST00000340611 SMAD4Q13485 552 aaKnown RBP14.58□□□□□ -0.08
BRAT1-201ENST00000340611 TSNQ15631 228 aaKnown RBP14.58□□□□□ -0.08
BRAT1-201ENST00000340611 ERAP2Q6P179 960 aa14.58□□□□□ -0.08
BRAT1-201ENST00000340611 ERN2Q76MJ5 926 aaKnown RBP14.58□□□□□ -0.08
BRAT1-201ENST00000340611 DPPA4Q7L190 304 aa14.58□□□□□ -0.08
BRAT1-201ENST00000340611 FBXL6Q8N531 539 aa14.58□□□□□ -0.08
BRAT1-201ENST00000340611 OR6F1Q8NGZ6 308 aa14.58□□□□□ -0.08
BRAT1-201ENST00000340611 HLA-CQ95604 372 aa14.58□□□□□ -0.08
BRAT1-201ENST00000340611 LTB4R2Q9NPC1 389 aa14.58□□□□□ -0.08
BRAT1-201ENST00000340611 DMDP11532 3685 aa14.58□□□□□ -0.08
BRAT1-201ENST00000340611 A0A087X1B8 175 aa14.58□□□□□ -0.08
BRAT1-201ENST00000340611 TSPAN11A1L157 253 aa14.58□□□□□ -0.08
BRAT1-201ENST00000340611 UBXN8O00124 270 aa14.58□□□□□ -0.08
BRAT1-201ENST00000340611 PCDH8O95206 1070 aa14.58□□□□□ -0.08
BRAT1-201ENST00000340611 CPNE6O95741 557 aa14.58□□□□□ -0.08
BRAT1-201ENST00000340611 C6P13671 934 aa14.58□□□□□ -0.08
BRAT1-201ENST00000340611 CD1DP15813 335 aa14.58□□□□□ -0.08
BRAT1-201ENST00000340611 ALOX12P18054 663 aa14.58□□□□□ -0.08
BRAT1-201ENST00000340611 M6PRP20645 277 aa14.58□□□□□ -0.08
BRAT1-201ENST00000340611 SHMT2P34897 504 aa14.58□□□□□ -0.08
BRAT1-201ENST00000340611 EIF2DP41214 584 aaKnown RBP14.58□□□□□ -0.08
BRAT1-201ENST00000340611 PTGER3P43115 390 aa14.58□□□□□ -0.08
BRAT1-201ENST00000340611 TAS2R38P59533 333 aa14.58□□□□□ -0.08
BRAT1-201ENST00000340611 CST6Q15828 149 aa14.58□□□□□ -0.08
BRAT1-201ENST00000340611 CCNYL2Q5T2Q4 361 aa14.58□□□□□ -0.08
BRAT1-201ENST00000340611 PTCRAQ6ISU1 281 aaPredicted RBP14.58□□□□□ -0.08
BRAT1-201ENST00000340611 Q6ZS52 159 aa14.58□□□□□ -0.08
BRAT1-201ENST00000340611 HDDC3Q8N4P3 179 aa14.58□□□□□ -0.08
BRAT1-201ENST00000340611 TMIEQ8NEW7 156 aa14.58□□□□□ -0.08
BRAT1-201ENST00000340611 SNAPC3Q92966 411 aa14.58□□□□□ -0.08
BRAT1-201ENST00000340611 AP2M1Q96CW1 435 aa14.58□□□□□ -0.08
BRAT1-201ENST00000340611 LINGO1Q96FE5 620 aa14.58□□□□□ -0.08
BRAT1-201ENST00000340611 TSPAN17Q96FV3 270 aa14.58□□□□□ -0.08
BRAT1-201ENST00000340611 KCNA7Q96RP8 456 aa14.58□□□□□ -0.08
BRAT1-201ENST00000340611 PHF7Q9BWX1 381 aaPredicted RBP14.58□□□□□ -0.08
BRAT1-201ENST00000340611 CD320Q9NPF0 282 aa14.58□□□□□ -0.08
BRAT1-201ENST00000340611 C2orf42Q9NWW7 574 aa14.58□□□□□ -0.08
BRAT1-201ENST00000340611 ACTR3BQ9P1U1 418 aa14.58□□□□□ -0.08
BRAT1-201ENST00000340611 TEKT2Q9UIF3 430 aa14.58□□□□□ -0.08
BRAT1-201ENST00000340611 BTRCQ9Y297 605 aa14.58□□□□□ -0.08
BRAT1-201ENST00000340611 MAGED1Q9Y5V3 778 aaPredicted RBP14.58□□□□□ -0.08
BRAT1-201ENST00000340611 EVPLLA8MZ36 301 aa14.57□□□□□ -0.08
BRAT1-201ENST00000340611 FOXA1P55317 472 aa14.57□□□□□ -0.08
BRAT1-201ENST00000340611 C19orf57Q0VDD7 668 aa14.57□□□□□ -0.08
BRAT1-201ENST00000340611 GALNT1Q10472 559 aaPredicted RBP14.57□□□□□ -0.08
BRAT1-201ENST00000340611 IGSF11Q5DX21 431 aa14.57□□□□□ -0.08
BRAT1-201ENST00000340611 PIP5KL1Q5T9C9 394 aa14.57□□□□□ -0.08
BRAT1-201ENST00000340611 LCN8Q6JVE9 175 aa14.57□□□□□ -0.08
BRAT1-201ENST00000340611 ZNF438Q7Z4V0 828 aa14.57□□□□□ -0.08
BRAT1-201ENST00000340611 R3HCC1LQ7Z5L2 792 aaKnown RBP14.57□□□□□ -0.08
BRAT1-201ENST00000340611 PLA2G15Q8NCC3 412 aa14.57□□□□□ -0.08
BRAT1-201ENST00000340611 RPLP0P6Q8NHW5 317 aa14.57□□□□□ -0.08
BRAT1-201ENST00000340611 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.57□□□□□ -0.087e-6■■■■■ 27.5
BRAT1-201ENST00000340611 TMEM74Q96NL1 305 aa14.57□□□□□ -0.08
BRAT1-201ENST00000340611 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.57□□□□□ -0.08
BRAT1-201ENST00000340611 CA14Q9ULX7 337 aa14.57□□□□□ -0.08
BRAT1-201ENST00000340611 NDUFAF1Q9Y375 327 aa14.57□□□□□ -0.08
BRAT1-201ENST00000340611 TRBV5-4A0A0C4DH59 114 aa14.57□□□□□ -0.08
BRAT1-201ENST00000340611 LZTS3O60299 673 aaPredicted RBP14.57□□□□□ -0.08
BRAT1-201ENST00000340611 SIX3O95343 332 aaPredicted RBP14.57□□□□□ -0.08
BRAT1-201ENST00000340611 HOXB2P14652 356 aa14.57□□□□□ -0.08
BRAT1-201ENST00000340611 MAT2AP31153 395 aaKnown RBP14.57□□□□□ -0.08
BRAT1-201ENST00000340611 CLCN7P51798 805 aa14.57□□□□□ -0.08
BRAT1-201ENST00000340611 KPNA2P52292 529 aaKnown RBP14.57□□□□□ -0.08
BRAT1-201ENST00000340611 TECPR1Q7Z6L1 1165 aa14.57□□□□□ -0.08
BRAT1-201ENST00000340611 LILRA3Q8N6C8 439 aaPredicted RBP14.57□□□□□ -0.08
BRAT1-201ENST00000340611 OR6Q1Q8NGQ2 317 aa14.57□□□□□ -0.08
BRAT1-201ENST00000340611 RASSF5Q8WWW0 418 aa14.57□□□□□ -0.08
BRAT1-201ENST00000340611 FKBP10Q96AY3 582 aa14.57□□□□□ -0.08
BRAT1-201ENST00000340611 LRRC58Q96CX6 371 aa14.57□□□□□ -0.08
BRAT1-201ENST00000340611 LRIG1Q96JA1 1093 aa14.57□□□□□ -0.08
BRAT1-201ENST00000340611 KCTD14Q9BQ13 255 aaPredicted RBP14.57□□□□□ -0.08
BRAT1-201ENST00000340611 ABCD2Q9UBJ2 740 aa14.57□□□□□ -0.08
BRAT1-201ENST00000340611 TRMT6Q9UJA5 497 aaKnown RBP14.57□□□□□ -0.08
BRAT1-201ENST00000340611 A0A1W2PQF6 199 aa14.56□□□□□ -0.08
BRAT1-201ENST00000340611 TMEM202A6NGA9 273 aa14.56□□□□□ -0.08
BRAT1-201ENST00000340611 IGLON5A6NGN9 336 aa14.56□□□□□ -0.08
BRAT1-201ENST00000340611 BTN3A1O00481 513 aa14.56□□□□□ -0.08
BRAT1-201ENST00000340611 PIP5K1BO14986 540 aa14.56□□□□□ -0.08
BRAT1-201ENST00000340611 AREL1O15033 823 aa14.56□□□□□ -0.08
BRAT1-201ENST00000340611 UGT2B11O75310 529 aa14.56□□□□□ -0.08
BRAT1-201ENST00000340611 VPS26AO75436 327 aa14.56□□□□□ -0.08
BRAT1-201ENST00000340611 TP53P04637 393 aaPredicted RBP14.56□□□□□ -0.08
BRAT1-201ENST00000340611 ZNF7P17097 686 aaPredicted RBP14.56□□□□□ -0.08
BRAT1-201ENST00000340611 GSK3BP49841 420 aa14.56□□□□□ -0.08
BRAT1-201ENST00000340611 OR2B6P58173 313 aa14.56□□□□□ -0.08
BRAT1-201ENST00000340611 DSTNP60981 165 aa14.56□□□□□ -0.08
BRAT1-201ENST00000340611 RPS6KA2Q15349 733 aa14.56□□□□□ -0.08
BRAT1-201ENST00000340611 KCTD20Q7Z5Y7 419 aa14.56□□□□□ -0.08
BRAT1-201ENST00000340611 SPARTQ8N0X7 666 aa14.56□□□□□ -0.08
BRAT1-201ENST00000340611 GTF2H4Q92759 462 aa14.56□□□□□ -0.08
BRAT1-201ENST00000340611 FOXJ1Q92949 421 aa14.56□□□□□ -0.08
BRAT1-201ENST00000340611 SNX18Q96RF0 628 aa14.56□□□□□ -0.08
BRAT1-201ENST00000340611 COPS8Q99627 209 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms