RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 OTOFQ9HC10 1997 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 TRAV19A0A0A6YYK7 116 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 MYL12BO14950 172 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 NIPSNAP2O75323 286 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 MYL12AP19105 171 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 WEE1P30291 646 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 EVI2BP34910 448 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 CDKN1CP49918 316 aaPredicted RBP9.08□□□□□ -0.96
NECAP1-201ENST00000339754 IL2P60568 153 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 GDPGP1Q6ZNW5 385 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 PTOV1Q86YD1 416 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 SLC5A8Q8N695 610 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 TEX26Q8N6G2 289 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 GALNT11Q8NCW6 608 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 LPCAT1Q8NF37 534 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 CD200R1Q8TD46 325 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 CHTF18Q8WVB6 975 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 LINGO1Q96FE5 620 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 HYLS1Q96M11 299 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 QRFPRQ96P65 431 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 TM9SF2Q99805 663 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 C2orf49Q9BVC5 232 aaPredicted RBP9.08□□□□□ -0.96
NECAP1-201ENST00000339754 TRIM45Q9H8W5 580 aaPredicted RBP9.08□□□□□ -0.96
NECAP1-201ENST00000339754 GPRC5BQ9NZH0 403 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 PLEKHB1Q9UF11 243 aaPredicted RBP9.08□□□□□ -0.96
NECAP1-201ENST00000339754 A0A1W2PQL4 384 aaPredicted RBP9.08□□□□□ -0.96
NECAP1-201ENST00000339754 A8MX80 341 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 E9PAM4 449 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 H3BUI4 141 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 SLC28A1O00337 649 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 FFAR3O14843 346 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 GPR42O15529 346 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 IRAK2O43187 625 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 PROM1O43490 865 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 TSC22D2O75157 780 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 TNFRSF21O75509 655 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 RFPL3O75679 317 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 CNMDO75829 334 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 OTCP00480 354 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 RPS3P23396 243 aaKnown RBP eCLIP9.08□□□□□ -0.96
NECAP1-201ENST00000339754 SSTR4P31391 388 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 S100A3P33764 101 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 SOX3P41225 446 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 MAP2K3P46734 347 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 MAN2A2P49641 1150 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 CPT1AP50416 773 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 KCNJ10P78508 379 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 RUNX1T1Q06455 604 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 RGS1Q08116 209 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 CSTF3Q12996 717 aaKnown RBP9.08□□□□□ -0.96
NECAP1-201ENST00000339754 KCNC3Q14003 757 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 DMC1Q14565 340 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 ZNF267Q14586 743 aaPredicted RBP9.08□□□□□ -0.96
NECAP1-201ENST00000339754 HKDC1Q2TB90 917 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 PLAG1Q6DJT9 500 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 TRIM46Q7Z4K8 759 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 ABI3BPQ7Z7G0 1075 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 FBXO16Q8IX29 292 aaPredicted RBP9.08□□□□□ -0.96
NECAP1-201ENST00000339754 RGL4Q8IZJ4 473 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 CARNMT1Q8N4J0 409 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 FATE1Q969F0 183 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 ULK4Q96C45 1275 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 AP2M1Q96CW1 435 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 ZBED6CLQ96FA7 236 aaPredicted RBP9.08□□□□□ -0.96
NECAP1-201ENST00000339754 HMCESQ96FZ2 354 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 MSANTD3Q96H12 275 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 DIRAS2Q96HU8 199 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 SPNS1Q9H2V7 528 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 LRTM1Q9HBL6 345 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 TXNRD2Q9NNW7 524 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 PDGFCQ9NRA1 345 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 STOML2Q9UJZ1 356 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 RIMKLBQ9ULI2 386 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 NDRG2Q9UN36 371 aaKnown RBP9.08□□□□□ -0.96
NECAP1-201ENST00000339754 MAPRE3Q9UPY8 281 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 LSM2Q9Y333 95 aaKnown RBP9.08□□□□□ -0.96
NECAP1-201ENST00000339754 CLCA3PQ9Y6N3 262 aa9.08□□□□□ -0.96
NECAP1-201ENST00000339754 TMEM229AB2RXF0 380 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 PLOD3O60568 738 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 NDUFS3O75489 264 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 LGI1O95970 557 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 HOXD4P09016 255 aaPredicted RBP9.07□□□□□ -0.96
NECAP1-201ENST00000339754 TSPAN19P0C672 248 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 DDCP20711 480 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 CRYBA2P53672 197 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 CLDN8P56748 225 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 SRP54P61011 504 aaKnown RBP9.07□□□□□ -0.96
NECAP1-201ENST00000339754 RIN1Q13671 783 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 PYDC2Q56P42 97 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 XKR4Q5GH76 650 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 LCN1P1Q5VSP4 162 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 MSANTD2Q6P1R3 559 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 BRAT1Q6PJG6 821 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 KIAA1324Q6UXG2 1013 aaKnown RBP9.07□□□□□ -0.96
NECAP1-201ENST00000339754 USP50Q70EL3 339 aaPredicted RBP9.07□□□□□ -0.96
NECAP1-201ENST00000339754 DDX53Q86TM3 631 aaKnown RBP9.07□□□□□ -0.96
NECAP1-201ENST00000339754 OR8H3Q8N146 312 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 CHCHD4Q8N4Q1 142 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 CPA6Q8N4T0 437 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 WDR36Q8NI36 951 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms