RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 SPATA19Q7Z5L4 167 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 ZFAND4Q86XD8 727 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 NAXDQ8IW45 347 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 OR2T11Q8NH01 316 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 RERGQ96A58 199 aaPredicted RBP13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 MTFMTQ96DP5 389 aaKnown RBP13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 CDC6Q99741 560 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 MAP3K3Q99759 626 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 SEMA5BQ9P283 1151 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 SLC12A4Q9UP95 1085 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 KLHL20Q9Y2M5 609 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 TMED5Q9Y3A6 229 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 DMDP11532 3685 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 UBDO15205 165 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 PEX11AO75192 247 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 RASSF9O75901 435 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 RPLP0P05388 317 aaKnown RBP13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 SLC35G6P0C7Q6 338 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 PVRP15151 417 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 ST6GAL1P15907 406 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 ARFIP1P53367 373 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 GFERP55789 205 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 PWP1Q13610 501 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 AP5B1Q2VPB7 878 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 TMEM35AQ53FP2 167 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 SPIN4Q56A73 249 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 C6orf136Q5SQH8 315 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 TMEM71Q6P5X7 295 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 CHSY3Q70JA7 882 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 ZNF655Q8N720 491 aaPredicted RBP13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 OR4D9Q8NGE8 314 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 MS4A8Q9BY19 250 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 LRRN3Q9H3W5 708 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 LRTM1Q9HBL6 345 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 PARD6AQ9NPB6 346 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 NOP53Q9NZM5 478 aaKnown RBP13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 GVINP1Q7Z2Y8 2422 aa13.9□□□□□ -0.18
NIPAL3-202ENST00000339255 PCNX2A6NKB5 2137 aa13.9□□□□□ -0.18
NIPAL3-202ENST00000339255 ZNF292O60281 2723 aa13.9□□□□□ -0.18
NIPAL3-202ENST00000339255 SLC9B1P1A6NJY1 282 aa13.9□□□□□ -0.18
NIPAL3-202ENST00000339255 CTSVO60911 334 aa13.9□□□□□ -0.18
NIPAL3-202ENST00000339255 ANKRD34CP0C6C1 535 aa13.9□□□□□ -0.18
NIPAL3-202ENST00000339255 IDO1P14902 403 aa13.9□□□□□ -0.18
NIPAL3-202ENST00000339255 TGM1P22735 817 aa13.9□□□□□ -0.18
NIPAL3-202ENST00000339255 MAPK1P28482 360 aa13.9□□□□□ -0.18
NIPAL3-202ENST00000339255 RPS13P62277 151 aaKnown RBP13.9□□□□□ -0.18
NIPAL3-202ENST00000339255 HSD11B2P80365 405 aa13.9□□□□□ -0.18
NIPAL3-202ENST00000339255 HMGCS1Q01581 520 aa13.9□□□□□ -0.18
NIPAL3-202ENST00000339255 EMX2Q04743 252 aa13.9□□□□□ -0.18
NIPAL3-202ENST00000339255 RGS1Q08116 209 aa13.9□□□□□ -0.18
NIPAL3-202ENST00000339255 CYP4F3Q08477 520 aa13.9□□□□□ -0.18
NIPAL3-202ENST00000339255 ACSM2AQ08AH3 577 aa13.9□□□□□ -0.18
NIPAL3-202ENST00000339255 GALNTL6Q49A17 601 aa13.9□□□□□ -0.18
NIPAL3-202ENST00000339255 CACHD1Q5VU97 1274 aa13.9□□□□□ -0.18
NIPAL3-202ENST00000339255 KHDRBS2Q5VWX1 349 aaKnown RBP13.9□□□□□ -0.18
NIPAL3-202ENST00000339255 FAM219BQ5XKK7 198 aa13.9□□□□□ -0.18
NIPAL3-202ENST00000339255 ACSM2BQ68CK6 577 aa13.9□□□□□ -0.18
NIPAL3-202ENST00000339255 ADNP2Q6IQ32 1131 aa13.9□□□□□ -0.18
NIPAL3-202ENST00000339255 VN1R5Q7Z5H4 357 aa13.9□□□□□ -0.18
NIPAL3-202ENST00000339255 ALYREFQ86V81 257 aaKnown RBP13.9□□□□□ -0.18
NIPAL3-202ENST00000339255 PLD3Q8IV08 490 aa13.9□□□□□ -0.18
NIPAL3-202ENST00000339255 FAM9CQ8IZT9 166 aa13.9□□□□□ -0.18
NIPAL3-202ENST00000339255 FNDC5Q8NAU1 212 aa13.9□□□□□ -0.18
NIPAL3-202ENST00000339255 PPM1MQ96MI6 270 aa13.9□□□□□ -0.18
NIPAL3-202ENST00000339255 OR2A5Q96R48 311 aa13.9□□□□□ -0.18
NIPAL3-202ENST00000339255 ASIC5Q9NY37 505 aa13.9□□□□□ -0.18
NIPAL3-202ENST00000339255 AHSPQ9NZD4 102 aa13.9□□□□□ -0.18
NIPAL3-202ENST00000339255 ADAMTS20P59510 1910 aa13.89□□□□□ -0.19
NIPAL3-202ENST00000339255 ZFHX2Q9C0A1 2572 aaPredicted RBP13.89□□□□□ -0.19
NIPAL3-202ENST00000339255 C4orf47A7E2U8 309 aa13.89□□□□□ -0.19
NIPAL3-202ENST00000339255 TXNDC9O14530 226 aa13.89□□□□□ -0.19
NIPAL3-202ENST00000339255 SLC22A2O15244 555 aa13.89□□□□□ -0.19
NIPAL3-202ENST00000339255 NDUFS4O43181 175 aa13.89□□□□□ -0.19
NIPAL3-202ENST00000339255 LCMT2O60294 686 aaKnown RBP13.89□□□□□ -0.19
NIPAL3-202ENST00000339255 NRP2O60462 931 aa13.89□□□□□ -0.19
NIPAL3-202ENST00000339255 CBFA2T3O75081 653 aa13.89□□□□□ -0.19
NIPAL3-202ENST00000339255 SEC22BO75396 215 aa13.89□□□□□ -0.19
NIPAL3-202ENST00000339255 NCF2P19878 526 aaPredicted RBP13.89□□□□□ -0.19
NIPAL3-202ENST00000339255 ADSLP30566 484 aaPredicted RBP13.89□□□□□ -0.19
NIPAL3-202ENST00000339255 MLLT3P42568 568 aaPredicted RBP13.89□□□□□ -0.19
NIPAL3-202ENST00000339255 STX1BP61266 288 aa13.89□□□□□ -0.19
NIPAL3-202ENST00000339255 STXBP1P61764 594 aaKnown RBP13.89□□□□□ -0.19
NIPAL3-202ENST00000339255 CYP4F2P78329 520 aa13.89□□□□□ -0.19
NIPAL3-202ENST00000339255 CFHR1Q03591 330 aa13.89□□□□□ -0.19
NIPAL3-202ENST00000339255 TGM3Q08188 693 aa13.89□□□□□ -0.19
NIPAL3-202ENST00000339255 ILKQ13418 452 aa13.89□□□□□ -0.19
NIPAL3-202ENST00000339255 ZIC1Q15915 447 aa13.89□□□□□ -0.19
NIPAL3-202ENST00000339255 GSTA3Q16772 222 aa13.89□□□□□ -0.19
NIPAL3-202ENST00000339255 MANEAQ5SRI9 462 aa13.89□□□□□ -0.19
NIPAL3-202ENST00000339255 FBXO42Q6P3S6 717 aa13.89□□□□□ -0.19
NIPAL3-202ENST00000339255 USP53Q70EK8 1073 aa13.89□□□□□ -0.19
NIPAL3-202ENST00000339255 ASPGQ86U10 573 aa13.89□□□□□ -0.19
NIPAL3-202ENST00000339255 MTDHQ86UE4 582 aaKnown RBP13.89□□□□□ -0.19
NIPAL3-202ENST00000339255 SRFBP1Q8NEF9 429 aaKnown RBP13.89□□□□□ -0.19
NIPAL3-202ENST00000339255 CREB3L4Q8TEY5 395 aa13.89□□□□□ -0.19
NIPAL3-202ENST00000339255 NLNQ9BYT8 704 aa13.89□□□□□ -0.19
NIPAL3-202ENST00000339255 PDE7BQ9NP56 450 aa13.89□□□□□ -0.19
NIPAL3-202ENST00000339255 RXFP3Q9NSD7 469 aa13.89□□□□□ -0.19
NIPAL3-202ENST00000339255 SOHLH2Q9NX45 425 aa13.89□□□□□ -0.19
NIPAL3-202ENST00000339255 PDP2Q9P2J9 529 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms