RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 UPK3BL1B0FP48 263 aa13.33□□□□□ -0.28
RTN4-202ENST00000337526 UPK3BL2E5RIL1 263 aa13.33□□□□□ -0.28
RTN4-202ENST00000337526 H0YJX3 145 aa13.33□□□□□ -0.28
RTN4-202ENST00000337526 TFPTP0C1Z6 253 aa13.33□□□□□ -0.28
RTN4-202ENST00000337526 AHCYP23526 432 aa13.33□□□□□ -0.28
RTN4-202ENST00000337526 GNALP38405 381 aa13.33□□□□□ -0.28
RTN4-202ENST00000337526 GBX2P52951 348 aaPredicted RBP13.33□□□□□ -0.28
RTN4-202ENST00000337526 ADAM8P78325 824 aa13.33□□□□□ -0.28
RTN4-202ENST00000337526 CD83Q01151 205 aa13.33□□□□□ -0.28
RTN4-202ENST00000337526 TCEANCQ8N8B7 351 aa13.33□□□□□ -0.28
RTN4-202ENST00000337526 CNIH3Q8TBE1 160 aa13.33□□□□□ -0.28
RTN4-202ENST00000337526 IGSF8Q969P0 613 aa13.33□□□□□ -0.28
RTN4-202ENST00000337526 MGME1Q9BQP7 344 aa13.33□□□□□ -0.28
RTN4-202ENST00000337526 CHIAQ9BZP6 476 aa13.33□□□□□ -0.28
RTN4-202ENST00000337526 LTBP4Q8N2S1 1624 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 BCKDHAP12694 445 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 ATF6P18850 670 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 GLDCP23378 1020 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 KDELR2P33947 212 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 CDKN2DP55273 166 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 OR4D2P58180 307 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 PIGFQ07326 219 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 LSAMPQ13449 338 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 LRRTM4Q86VH4 590 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 KDM1BQ8NB78 822 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 NEK7Q8TDX7 302 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 POF1BQ8WVV4 589 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 SLC22A18Q96BI1 424 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 RIPOR3Q96MK2 946 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 MMP27Q9H306 513 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 MKKSQ9NPJ1 570 aaPredicted RBP13.32□□□□□ -0.28
RTN4-202ENST00000337526 SMOXQ9NWM0 555 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 DNAJC27Q9NZQ0 273 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 RHCGQ9UBD6 479 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 UTS2RQ9UKP6 389 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 MED31Q9Y3C7 131 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 SDK1Q7Z5N4 2213 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 RGPD8O14715 1765 aaPredicted RBP13.32□□□□□ -0.28
RTN4-202ENST00000337526 FAM170BA6NMN3 283 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 YES1P07947 543 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 EDNRBP24530 442 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 PREPP48147 710 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 KCNC4Q03721 635 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 RING1Q06587 406 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 ZNF763Q0D2J5 394 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 VMACQ2NL98 169 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 C22orf39Q6P5X5 142 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 GHDCQ8N2G8 530 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 HAVCR1Q96D42 359 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 EIF3KQ9UBQ5 218 aaKnown RBP13.32□□□□□ -0.28
RTN4-202ENST00000337526 LRP6O75581 1613 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 PRODHO43272 600 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 ACVR2AP27037 513 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 RPL10P27635 214 aaKnown RBP13.32□□□□□ -0.28
RTN4-202ENST00000337526 HLCSP50747 726 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 CDH11P55287 796 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 ST3GAL3Q11203 375 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 ST3GAL4Q11206 333 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 ANKDD1AQ495B1 522 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 REEP3Q6NUK4 255 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 B3GNT9Q6UX72 402 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 ZNF280BQ86YH2 543 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 KRTCAP2Q8N6L1 136 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 FAM46DQ8NEK8 389 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 SLC28A3Q9HAS3 691 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 PHF24Q9UPV7 400 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 SLC45A1Q9Y2W3 748 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 IGKV6D-21A0A0A0MT36 114 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 A0A0X1KG70 313 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 FOXD2O60548 495 aaPredicted RBP13.32□□□□□ -0.28
RTN4-202ENST00000337526 ITIH1P19827 911 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 PGDP52209 483 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 SH3BP2P78314 561 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 SUSD1Q6UWL2 747 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 HACD2Q6Y1H2 254 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 ADGRD2Q7Z7M1 963 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 RNF130Q86XS8 419 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 OR52B6Q8NGF0 335 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 SLC5A11Q8WWX8 675 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 TUBA1CQ9BQE3 449 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 MYH7BA7E2Y1 1941 aa13.32□□□□□ -0.28
RTN4-202ENST00000337526 LRRC37A3O60309 1634 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 ITGA3P26006 1051 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 TSPAN5P62079 268 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 PPP3R1P63098 170 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 SWI5Q1ZZU3 235 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 SHQ1Q6PI26 577 aaKnown RBP13.31□□□□□ -0.28
RTN4-202ENST00000337526 SYCE2Q6PIF2 218 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 OR8H3Q8N146 312 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 GOLM1Q8NBJ4 401 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 RAB8BQ92930 207 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 TSSK6Q9BXA6 273 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 CARS2Q9HA77 564 aaKnown RBP13.31□□□□□ -0.28
RTN4-202ENST00000337526 ANKHQ9HCJ1 492 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 HEBP2Q9Y5Z4 205 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 FKBP7Q9Y680 259 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 A0A096LPI6 279 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 G3V2L1 256 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 PDCD5O14737 125 aa13.31□□□□□ -0.28
RTN4-202ENST00000337526 GSTT2BP0CG30 244 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms