RNA–Protein interactions for RNA: ENST00000336294.9

TMEM39B-201, Transcript of transmembrane protein 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39B, Length 1,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-201ENST00000336294 RBM4BQ9BQ04 359 aaKnown RBP16.05■□□□□ 0.16
TMEM39B-201ENST00000336294 RBM4Q9BWF3 364 aaKnown RBP16.05■□□□□ 0.16
TMEM39B-201ENST00000336294 BHLHE41Q9C0J9 482 aaPredicted RBP16.05■□□□□ 0.16
TMEM39B-201ENST00000336294 USE1Q9NZ43 259 aa16.05■□□□□ 0.16
TMEM39B-201ENST00000336294 ATP6V1HQ9UI12 483 aa16.05■□□□□ 0.16
TMEM39B-201ENST00000336294 RPS6KA6Q9UK32 745 aa16.05■□□□□ 0.16
TMEM39B-201ENST00000336294 TSC22D4Q9Y3Q8 395 aa16.05■□□□□ 0.16
TMEM39B-201ENST00000336294 RANBP2P49792 3224 aaKnown RBP16.04■□□□□ 0.16
TMEM39B-201ENST00000336294 KLHL33A6NCF5 533 aa16.04■□□□□ 0.16
TMEM39B-201ENST00000336294 ADH1BP00325 375 aa16.04■□□□□ 0.16
TMEM39B-201ENST00000336294 TAS2R38P59533 333 aa16.04■□□□□ 0.16
TMEM39B-201ENST00000336294 WSCD2Q2TBF2 565 aa16.04■□□□□ 0.16
TMEM39B-201ENST00000336294 LRRC23Q53EV4 343 aaPredicted RBP16.04■□□□□ 0.16
TMEM39B-201ENST00000336294 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.04■□□□□ 0.16
TMEM39B-201ENST00000336294 COMMD6Q7Z4G1 85 aa16.04■□□□□ 0.16
TMEM39B-201ENST00000336294 CHPFQ8IZ52 775 aa16.04■□□□□ 0.16
TMEM39B-201ENST00000336294 OR5AR1Q8NGP9 310 aa16.04■□□□□ 0.16
TMEM39B-201ENST00000336294 TFGQ92734 400 aaPredicted RBP16.04■□□□□ 0.16
TMEM39B-201ENST00000336294 CHFRQ96EP1 664 aa16.04■□□□□ 0.16
TMEM39B-201ENST00000336294 KXD1Q9BQD3 176 aa16.04■□□□□ 0.16
TMEM39B-201ENST00000336294 OSBPL10Q9BXB5 764 aa16.04■□□□□ 0.16
TMEM39B-201ENST00000336294 REEP4Q9H6H4 257 aa16.04■□□□□ 0.16
TMEM39B-201ENST00000336294 SOX17Q9H6I2 414 aaPredicted RBP16.04■□□□□ 0.16
TMEM39B-201ENST00000336294 TPT1P8Q9HAU6 139 aa16.04■□□□□ 0.16
TMEM39B-201ENST00000336294 VPS4AQ9UN37 437 aa16.04■□□□□ 0.16
TMEM39B-201ENST00000336294 MAGED1Q9Y5V3 778 aaPredicted RBP16.04■□□□□ 0.16
TMEM39B-201ENST00000336294 GMEB1Q9Y692 573 aa16.04■□□□□ 0.16
TMEM39B-201ENST00000336294 RNASET2O00584 256 aaKnown RBP16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 E2F6O75461 281 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 ZNF682O95780 498 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 TGFB1P01137 390 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 C5AR1P21730 350 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 RPL3P39023 403 aaKnown RBP16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 WASP42768 502 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 MAGEA2P43356 314 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 CDH15P55291 814 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 CAMK2GQ13555 558 aaPredicted RBP16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 ENPP2Q13822 863 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 CYP2A13Q16696 494 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 ITPRIPL2Q3MIP1 535 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 ZIK1Q3SY52 487 aaPredicted RBP16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 DHRS4L2Q6PKH6 230 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 EP400NLQ6ZTU2 488 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 ARMCX6Q7L4S7 300 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 R3HCC1LQ7Z5L2 792 aaKnown RBP16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 CACUL1Q86Y37 369 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 KRT78Q8N1N4 520 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 ZNF420Q8TAQ5 688 aaPredicted RBP16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 IL17FQ96PD4 163 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 ATAD3AQ9NVI7 634 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 SH3BP4Q9P0V3 963 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 ZNF282Q9UDV7 671 aaPredicted RBP16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 SLC23A2Q9UGH3 650 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 PLAGL1Q9UM63 463 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 ERVK-11Q9UQG0 969 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 TDRKHQ9Y2W6 561 aaKnown RBP16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 C1orf226A1L170 272 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 KMOO15229 486 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 GDI1P31150 447 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 HSD17B2P37059 387 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 IST1P53990 364 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 PPP2R2BQ00005 443 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 MEF2AQ02078 507 aaPredicted RBP16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 BIRC2Q13490 618 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 ARHGAP19Q14CB8 494 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 AGERQ15109 404 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 METRNLQ641Q3 311 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 PPP2R2DQ66LE6 453 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 SPESP1Q6UW49 350 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 TMEM184AQ6ZMB5 413 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 PTOV1Q86YD1 416 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 HIPK1Q86Z02 1210 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 ZDHHC21Q8IVQ6 265 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 METTL4Q8N3J2 472 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 HDDC3Q8N4P3 179 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 OR4A15Q8NGL6 344 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 LZICQ8WZA0 190 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 ELSPBP1Q96BH3 223 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 MYADMQ96S97 322 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 LGR4Q9BXB1 951 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 PBX4Q9BYU1 374 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 SPNS1Q9H2V7 528 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 NKX2-4Q9H2Z4 354 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 OR51B5Q9H339 312 aa16.03■□□□□ 0.16
TMEM39B-201ENST00000336294 GPR89AB7ZAQ6 455 aa16.02■□□□□ 0.16
TMEM39B-201ENST00000336294 C1QCP02747 245 aa16.02■□□□□ 0.16
TMEM39B-201ENST00000336294 GPR89BP0CG08 455 aa16.02■□□□□ 0.16
TMEM39B-201ENST00000336294 ERGP11308 486 aa16.02■□□□□ 0.16
TMEM39B-201ENST00000336294 EFNA1P20827 205 aaPredicted RBP16.02■□□□□ 0.16
TMEM39B-201ENST00000336294 RPL10P27635 214 aaKnown RBP16.02■□□□□ 0.16
TMEM39B-201ENST00000336294 TEAD1P28347 426 aa16.02■□□□□ 0.16
TMEM39B-201ENST00000336294 KDELR2P33947 212 aa16.02■□□□□ 0.16
TMEM39B-201ENST00000336294 DCTP40126 519 aa16.02■□□□□ 0.16
TMEM39B-201ENST00000336294 NUP107P57740 925 aa16.02■□□□□ 0.16
TMEM39B-201ENST00000336294 VEZF1Q14119 521 aa16.02■□□□□ 0.16
TMEM39B-201ENST00000336294 CCNYL2Q5T2Q4 361 aa16.02■□□□□ 0.16
TMEM39B-201ENST00000336294 TTC23Q5W5X9 447 aa16.02■□□□□ 0.16
TMEM39B-201ENST00000336294 ANKRD54Q6NXT1 300 aa16.02■□□□□ 0.16
TMEM39B-201ENST00000336294 SYCE2Q6PIF2 218 aa16.02■□□□□ 0.16
TMEM39B-201ENST00000336294 TMIGD1Q6UXZ0 262 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms