RNA–Protein interactions for RNA: ENST00000335387.9

RC3H2-201, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 1 (best) BASIC

Gene RC3H2, Length 3,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-201ENST00000335387 RIBC2Q9H4K1 309 aa12.9□□□□□ -0.34
RC3H2-201ENST00000335387 DKK3Q9UBP4 350 aa12.9□□□□□ -0.34
RC3H2-201ENST00000335387 B4GALT6Q9UBX8 382 aa12.9□□□□□ -0.34
RC3H2-201ENST00000335387 BTBD3Q9Y2F9 522 aa12.9□□□□□ -0.34
RC3H2-201ENST00000335387 SAMHD1Q9Y3Z3 626 aaKnown RBP12.9□□□□□ -0.34
RC3H2-201ENST00000335387 PCDHGA2Q9Y5H1 932 aa12.9□□□□□ -0.34
RC3H2-201ENST00000335387 LYVE1Q9Y5Y7 322 aa12.9□□□□□ -0.34
RC3H2-201ENST00000335387 PCM1Q15154 2024 aa12.9□□□□□ -0.34
RC3H2-201ENST00000335387 LRRK1Q38SD2 2015 aa12.9□□□□□ -0.34
RC3H2-201ENST00000335387 GABRR3A8MPY1 467 aa12.9□□□□□ -0.35
RC3H2-201ENST00000335387 ARHGEF33A8MVX0 844 aa12.9□□□□□ -0.35
RC3H2-201ENST00000335387 CACNB4O00305 520 aaPredicted RBP12.9□□□□□ -0.35
RC3H2-201ENST00000335387 ADAM23O75077 832 aa12.9□□□□□ -0.35
RC3H2-201ENST00000335387 FSHRP23945 695 aa12.9□□□□□ -0.35
RC3H2-201ENST00000335387 MAP2K4P45985 399 aa12.9□□□□□ -0.35
RC3H2-201ENST00000335387 PRLHRP49683 370 aa12.9□□□□□ -0.35
RC3H2-201ENST00000335387 CCR3P51677 355 aa12.9□□□□□ -0.35
RC3H2-201ENST00000335387 DOC2AQ14183 400 aa12.9□□□□□ -0.35
RC3H2-201ENST00000335387 TAF12Q16514 161 aa12.9□□□□□ -0.35
RC3H2-201ENST00000335387 CRB2Q5IJ48 1285 aa12.9□□□□□ -0.35
RC3H2-201ENST00000335387 TECPR1Q7Z6L1 1165 aa12.9□□□□□ -0.35
RC3H2-201ENST00000335387 VTCN1Q7Z7D3 282 aa12.9□□□□□ -0.35
RC3H2-201ENST00000335387 NPAS3Q8IXF0 933 aa12.9□□□□□ -0.35
RC3H2-201ENST00000335387 TMCO5AQ8N6Q1 288 aa12.9□□□□□ -0.35
RC3H2-201ENST00000335387 ALOXE3Q9BYJ1 711 aa12.9□□□□□ -0.35
RC3H2-201ENST00000335387 MMP27Q9H306 513 aa12.9□□□□□ -0.35
RC3H2-201ENST00000335387 NDUFAF4Q9P032 175 aa12.9□□□□□ -0.35
RC3H2-201ENST00000335387 PCDH10Q9P2E7 1040 aa12.9□□□□□ -0.35
RC3H2-201ENST00000335387 STOX2Q9P2F5 926 aaPredicted RBP12.9□□□□□ -0.35
RC3H2-201ENST00000335387 RNF6Q9Y252 685 aa12.9□□□□□ -0.35
RC3H2-201ENST00000335387 U3KQV3 271 aa12.9□□□□□ -0.35
RC3H2-201ENST00000335387 PTGES3LE9PB15 166 aa12.89□□□□□ -0.35
RC3H2-201ENST00000335387 ADAMDEC1O15204 470 aa12.89□□□□□ -0.35
RC3H2-201ENST00000335387 ZNF682O95780 498 aa12.89□□□□□ -0.35
RC3H2-201ENST00000335387 LAMP1P11279 417 aa12.89□□□□□ -0.35
RC3H2-201ENST00000335387 CYP2A6P11509 494 aaPredicted RBP12.89□□□□□ -0.35
RC3H2-201ENST00000335387 COX7A2P14406 83 aa12.89□□□□□ -0.35
RC3H2-201ENST00000335387 ITGADQ13349 1161 aa12.89□□□□□ -0.35
RC3H2-201ENST00000335387 RFLNAQ6ZTI6 216 aa12.89□□□□□ -0.35
RC3H2-201ENST00000335387 SLC30A8Q8IWU4 369 aa12.89□□□□□ -0.35
RC3H2-201ENST00000335387 DNAJC22Q8N4W6 341 aa12.89□□□□□ -0.35
RC3H2-201ENST00000335387 DENND6BQ8NEG7 585 aa12.89□□□□□ -0.35
RC3H2-201ENST00000335387 MTERF3Q96E29 417 aa12.89□□□□□ -0.35
RC3H2-201ENST00000335387 ZSCAN5AQ9BUG6 496 aa12.89□□□□□ -0.35
RC3H2-201ENST00000335387 ATAD3AQ9NVI7 634 aa12.89□□□□□ -0.35
RC3H2-201ENST00000335387 GPATCH2Q9NW75 528 aa12.89□□□□□ -0.35
RC3H2-201ENST00000335387 ADPRHL2Q9NX46 363 aa12.89□□□□□ -0.35
RC3H2-201ENST00000335387 CFAP97Q9P2B7 532 aa12.89□□□□□ -0.35
RC3H2-201ENST00000335387 PABPN1LA6NDY0 278 aaKnown RBP12.89□□□□□ -0.35
RC3H2-201ENST00000335387 M0R082 166 aa12.89□□□□□ -0.35
RC3H2-201ENST00000335387 KLHL18O94889 574 aa12.89□□□□□ -0.35
RC3H2-201ENST00000335387 CDK1P06493 297 aa12.89□□□□□ -0.35
RC3H2-201ENST00000335387 TIA1P31483 386 aaKnown RBP eCLIP12.89□□□□□ -0.35
RC3H2-201ENST00000335387 EIF2DP41214 584 aaKnown RBP12.89□□□□□ -0.35
RC3H2-201ENST00000335387 PPP5CP53041 499 aa12.89□□□□□ -0.35
RC3H2-201ENST00000335387 PCBP3P57721 371 aaKnown RBP12.89□□□□□ -0.35
RC3H2-201ENST00000335387 GDPD4Q6W3E5 623 aa12.89□□□□□ -0.35
RC3H2-201ENST00000335387 GALNT5Q7Z7M9 940 aa12.89□□□□□ -0.35
RC3H2-201ENST00000335387 SNRNP27Q8WVK2 155 aaKnown RBP12.89□□□□□ -0.35
RC3H2-201ENST00000335387 LGALS12Q96DT0 336 aa12.89□□□□□ -0.35
RC3H2-201ENST00000335387 ASIC4Q96FT7 647 aa12.89□□□□□ -0.35
RC3H2-201ENST00000335387 ZNF558Q96NG5 402 aa12.89□□□□□ -0.35
RC3H2-201ENST00000335387 NDOR1Q9UHB4 597 aa12.89□□□□□ -0.35
RC3H2-201ENST00000335387 ITGB1BP2Q9UKP3 347 aa12.89□□□□□ -0.35
RC3H2-201ENST00000335387 FZD4Q9ULV1 537 aa12.89□□□□□ -0.35
RC3H2-201ENST00000335387 METTL15A6NJ78 407 aa12.88□□□□□ -0.35
RC3H2-201ENST00000335387 E7EQ34 232 aa12.88□□□□□ -0.35
RC3H2-201ENST00000335387 PRRG1O14668 218 aa12.88□□□□□ -0.35
RC3H2-201ENST00000335387 EPHA2P29317 976 aa12.88□□□□□ -0.35
RC3H2-201ENST00000335387 MAPK10P53779 464 aa12.88□□□□□ -0.35
RC3H2-201ENST00000335387 ELP6Q0PNE2 266 aa12.88□□□□□ -0.35
RC3H2-201ENST00000335387 PPP1R8Q12972 351 aaKnown RBP12.88□□□□□ -0.35
RC3H2-201ENST00000335387 GAB1Q13480 694 aa12.88□□□□□ -0.35
RC3H2-201ENST00000335387 CYP2A13Q16696 494 aa12.88□□□□□ -0.35
RC3H2-201ENST00000335387 LILRA6Q6PI73 481 aa12.88□□□□□ -0.35
RC3H2-201ENST00000335387 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.88□□□□□ -0.35
RC3H2-201ENST00000335387 PLEKHG7Q6ZR37 379 aa12.88□□□□□ -0.35
RC3H2-201ENST00000335387 DPPA4Q7L190 304 aa12.88□□□□□ -0.35
RC3H2-201ENST00000335387 TRIM74Q86UV6 250 aa12.88□□□□□ -0.35
RC3H2-201ENST00000335387 TRIM73Q86UV7 250 aa12.88□□□□□ -0.35
RC3H2-201ENST00000335387 NRSN1Q8IZ57 195 aa12.88□□□□□ -0.35
RC3H2-201ENST00000335387 CLECL1Q8IZS7 167 aa12.88□□□□□ -0.35
RC3H2-201ENST00000335387 DNASE1L2Q92874 299 aa12.88□□□□□ -0.35
RC3H2-201ENST00000335387 EXD2Q9NVH0 621 aa12.88□□□□□ -0.35
RC3H2-201ENST00000335387 VPS4AQ9UN37 437 aa12.88□□□□□ -0.35
RC3H2-201ENST00000335387 PCDHGA3Q9Y5H0 932 aa12.88□□□□□ -0.35
RC3H2-201ENST00000335387 CEP350Q5VT06 3117 aa12.88□□□□□ -0.35
RC3H2-201ENST00000335387 LEFTY2O00292 366 aa12.88□□□□□ -0.35
RC3H2-201ENST00000335387 TBX19O60806 448 aa12.88□□□□□ -0.35
RC3H2-201ENST00000335387 SLC34A2O95436 690 aa12.88□□□□□ -0.35
RC3H2-201ENST00000335387 ETHE1O95571 254 aa12.88□□□□□ -0.35
RC3H2-201ENST00000335387 ANXA8P13928 327 aa12.88□□□□□ -0.35
RC3H2-201ENST00000335387 RPL3P39023 403 aaKnown RBP12.88□□□□□ -0.35
RC3H2-201ENST00000335387 PSMD7P51665 324 aa12.88□□□□□ -0.35
RC3H2-201ENST00000335387 EPHA5P54756 1037 aa12.88□□□□□ -0.35
RC3H2-201ENST00000335387 IRF8Q02556 426 aa12.88□□□□□ -0.35
RC3H2-201ENST00000335387 SIM2Q14190 667 aaPredicted RBP12.88□□□□□ -0.35
RC3H2-201ENST00000335387 BCL7AQ4VC05 210 aa12.88□□□□□ -0.35
RC3H2-201ENST00000335387 ASTLQ6HA08 431 aaPredicted RBP12.88□□□□□ -0.35
RC3H2-201ENST00000335387 CNKSR3Q6P9H4 555 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms