RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 SYT11Q9BT88 431 aa14.52□□□□□ -0.09
C9orf47-201ENST00000334490 C11orf16Q9NQ32 467 aa14.52□□□□□ -0.09
C9orf47-201ENST00000334490 WASH4PA8MWX3 477 aa14.52□□□□□ -0.09
C9orf47-201ENST00000334490 HEXBP07686 556 aa14.52□□□□□ -0.09
C9orf47-201ENST00000334490 FGF3P11487 239 aaPredicted RBP14.52□□□□□ -0.09
C9orf47-201ENST00000334490 ITGB7P26010 798 aa14.52□□□□□ -0.09
C9orf47-201ENST00000334490 DIO3P55073 304 aa14.52□□□□□ -0.09
C9orf47-201ENST00000334490 FAM180AQ6UWF9 173 aa14.52□□□□□ -0.09
C9orf47-201ENST00000334490 ARHGAP12Q8IWW6 846 aa14.52□□□□□ -0.09
C9orf47-201ENST00000334490 SVOPLQ8N434 492 aa14.52□□□□□ -0.09
C9orf47-201ENST00000334490 OR4K17Q8NGC6 315 aa14.52□□□□□ -0.09
C9orf47-201ENST00000334490 ENKURQ8TC29 256 aa14.52□□□□□ -0.09
C9orf47-201ENST00000334490 GRHL3Q8TE85 626 aa14.52□□□□□ -0.09
C9orf47-201ENST00000334490 KCNS3Q9BQ31 491 aa14.52□□□□□ -0.09
C9orf47-201ENST00000334490 LYARQ9NX58 379 aaKnown RBP14.52□□□□□ -0.09
C9orf47-201ENST00000334490 CMTM6Q9NX76 183 aa14.52□□□□□ -0.09
C9orf47-201ENST00000334490 MS4A12Q9NXJ0 267 aa14.52□□□□□ -0.09
C9orf47-201ENST00000334490 DNAJB9Q9UBS3 223 aa14.52□□□□□ -0.09
C9orf47-201ENST00000334490 STRCP1A6NGW2 1772 aa14.51□□□□□ -0.09
C9orf47-201ENST00000334490 TYROBPO43914 113 aa14.51□□□□□ -0.09
C9orf47-201ENST00000334490 HLA-FP30511 346 aa14.51□□□□□ -0.09
C9orf47-201ENST00000334490 PTGES3Q15185 160 aaKnown RBP14.51□□□□□ -0.09
C9orf47-201ENST00000334490 PUS10Q3MIT2 529 aaKnown RBP14.51□□□□□ -0.09
C9orf47-201ENST00000334490 GPR107Q5VW38 600 aa14.51□□□□□ -0.09
C9orf47-201ENST00000334490 STEAP4Q687X5 459 aa14.51□□□□□ -0.09
C9orf47-201ENST00000334490 NOXRED1Q6NXP6 359 aa14.51□□□□□ -0.09
C9orf47-201ENST00000334490 TMEM174Q8WUU8 243 aa14.51□□□□□ -0.09
C9orf47-201ENST00000334490 LRCH3Q96II8 777 aa14.51□□□□□ -0.09
C9orf47-201ENST00000334490 TRIB3Q96RU7 358 aa14.51□□□□□ -0.09
C9orf47-201ENST00000334490 PRTFDC1Q9NRG1 225 aa14.51□□□□□ -0.09
C9orf47-201ENST00000334490 ANKRD36CQ5JPF3 1778 aa14.51□□□□□ -0.09
C9orf47-201ENST00000334490 SCN9AQ15858 1988 aa14.51□□□□□ -0.09
C9orf47-201ENST00000334490 H0YGN5 161 aa14.51□□□□□ -0.09
C9orf47-201ENST00000334490 MAGEB3O15480 346 aa14.51□□□□□ -0.09
C9orf47-201ENST00000334490 FADS2O95864 444 aaKnown RBP14.51□□□□□ -0.09
C9orf47-201ENST00000334490 SYPP08247 313 aa14.51□□□□□ -0.09
C9orf47-201ENST00000334490 FDXRP22570 491 aa14.51□□□□□ -0.09
C9orf47-201ENST00000334490 GSTM4Q03013 218 aa14.51□□□□□ -0.09
C9orf47-201ENST00000334490 DOC2AQ14183 400 aa14.51□□□□□ -0.09
C9orf47-201ENST00000334490 PKDCCQ504Y2 493 aa14.51□□□□□ -0.09
C9orf47-201ENST00000334490 UBAP2Q5T6F2 1119 aaKnown RBP14.51□□□□□ -0.09
C9orf47-201ENST00000334490 PNPLA1Q8N8W4 532 aa14.51□□□□□ -0.09
C9orf47-201ENST00000334490 RNASE11Q8TAA1 199 aaKnown RBP14.51□□□□□ -0.09
C9orf47-201ENST00000334490 RLN3Q8WXF3 142 aa14.51□□□□□ -0.09
C9orf47-201ENST00000334490 ISG20Q96AZ6 181 aaKnown RBP14.51□□□□□ -0.09
C9orf47-201ENST00000334490 NFS1Q9Y697 457 aa14.51□□□□□ -0.09
C9orf47-201ENST00000334490 NRAPQ86VF7 1730 aa14.51□□□□□ -0.09
C9orf47-201ENST00000334490 IVDP26440 423 aa14.51□□□□□ -0.09
C9orf47-201ENST00000334490 ACADLP28330 430 aa14.51□□□□□ -0.09
C9orf47-201ENST00000334490 C6orf52Q5T4I8 152 aa14.51□□□□□ -0.09
C9orf47-201ENST00000334490 CDHR3Q6ZTQ4 885 aa14.51□□□□□ -0.09
C9orf47-201ENST00000334490 ZZZ3Q8IYH5 903 aa14.51□□□□□ -0.09
C9orf47-201ENST00000334490 MYLIPQ8WY64 445 aa14.51□□□□□ -0.09
C9orf47-201ENST00000334490 TP53INP1Q96A56 240 aa14.51□□□□□ -0.09
C9orf47-201ENST00000334490 PKP4Q99569 1192 aa14.51□□□□□ -0.09
C9orf47-201ENST00000334490 TVP23BQ9NYZ1 205 aa14.51□□□□□ -0.09
C9orf47-201ENST00000334490 CRNNQ9UBG3 495 aaPredicted RBP14.51□□□□□ -0.09
C9orf47-201ENST00000334490 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.51□□□□□ -0.09
C9orf47-201ENST00000334490 TRBC2A0A5B9 178 aa14.5□□□□□ -0.09
C9orf47-201ENST00000334490 WWP2O00308 870 aa14.5□□□□□ -0.09
C9orf47-201ENST00000334490 KHNYNO15037 678 aaKnown RBP14.5□□□□□ -0.09
C9orf47-201ENST00000334490 KIAA0355O15063 1070 aa14.5□□□□□ -0.09
C9orf47-201ENST00000334490 OR2B3O76000 313 aa14.5□□□□□ -0.09
C9orf47-201ENST00000334490 PRKD3O94806 890 aa14.5□□□□□ -0.09
C9orf47-201ENST00000334490 GSK3BP49841 420 aa14.5□□□□□ -0.09
C9orf47-201ENST00000334490 OLR1P78380 273 aa14.5□□□□□ -0.09
C9orf47-201ENST00000334490 TMEM240Q5SV17 173 aa14.5□□□□□ -0.09
C9orf47-201ENST00000334490 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.5□□□□□ -0.09
C9orf47-201ENST00000334490 TANGO2Q6ICL3 276 aa14.5□□□□□ -0.09
C9orf47-201ENST00000334490 GAREM2Q75VX8 874 aa14.5□□□□□ -0.09
C9orf47-201ENST00000334490 CCDC116Q8IYX3 515 aa14.5□□□□□ -0.09
C9orf47-201ENST00000334490 SEC14L1Q92503 715 aa14.5□□□□□ -0.09
C9orf47-201ENST00000334490 MRPS26Q9BYN8 205 aaKnown RBP14.5□□□□□ -0.09
C9orf47-201ENST00000334490 MTMR10Q9NXD2 777 aa14.5□□□□□ -0.09
C9orf47-201ENST00000334490 FTSJ1Q9UET6 329 aa14.5□□□□□ -0.09
C9orf47-201ENST00000334490 COL22A1Q8NFW1 1626 aaPredicted RBP14.5□□□□□ -0.09
C9orf47-201ENST00000334490 AQP12BA6NM10 295 aa14.5□□□□□ -0.09
C9orf47-201ENST00000334490 IL4RP24394 825 aa14.5□□□□□ -0.09
C9orf47-201ENST00000334490 CDKN1CP49918 316 aaPredicted RBP14.5□□□□□ -0.09
C9orf47-201ENST00000334490 RAB28P51157 221 aa14.5□□□□□ -0.09
C9orf47-201ENST00000334490 RHAGQ02094 409 aa14.5□□□□□ -0.09
C9orf47-201ENST00000334490 GPR153Q6NV75 609 aa14.5□□□□□ -0.09
C9orf47-201ENST00000334490 NIPAL1Q6NVV3 410 aa14.5□□□□□ -0.09
C9orf47-201ENST00000334490 SLC36A4Q6YBV0 504 aa14.5□□□□□ -0.09
C9orf47-201ENST00000334490 AHSA2Q719I0 299 aa14.5□□□□□ -0.09
C9orf47-201ENST00000334490 ZNF761Q86XN6 746 aaPredicted RBP14.5□□□□□ -0.09
C9orf47-201ENST00000334490 AQP12AQ8IXF9 295 aa14.5□□□□□ -0.09
C9orf47-201ENST00000334490 LINC01465Q8N7H1 131 aa14.5□□□□□ -0.09
C9orf47-201ENST00000334490 PHOSPHO1Q8TCT1 267 aa14.5□□□□□ -0.09
C9orf47-201ENST00000334490 SLC22A12Q96S37 553 aa14.5□□□□□ -0.09
C9orf47-201ENST00000334490 REEP4Q9H6H4 257 aa14.5□□□□□ -0.09
C9orf47-201ENST00000334490 HMG20AQ9NP66 347 aa14.5□□□□□ -0.09
C9orf47-201ENST00000334490 SLC7A8Q9UHI5 535 aa14.5□□□□□ -0.09
C9orf47-201ENST00000334490 RGS10O43665 173 aa14.5□□□□□ -0.09
C9orf47-201ENST00000334490 PRAMEF12O95522 483 aa14.5□□□□□ -0.09
C9orf47-201ENST00000334490 PLGP00747 810 aaPredicted RBP14.5□□□□□ -0.09
C9orf47-201ENST00000334490 CRB2Q5IJ48 1285 aa14.5□□□□□ -0.09
C9orf47-201ENST00000334490 TRAF7Q6Q0C0 670 aa14.5□□□□□ -0.09
C9orf47-201ENST00000334490 KDELC1Q6UW63 502 aa14.5□□□□□ -0.09
C9orf47-201ENST00000334490 SYVN1Q86TM6 617 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms