RNA–Protein interactions for RNA: ENST00000334409.9

PDCD1-201, Transcript of programmed cell death 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD1, Length 2,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD1-201ENST00000334409 TUBB1Q9H4B7 451 aa16.4■□□□□ 0.22
PDCD1-201ENST00000334409 SLC52A3Q9NQ40 469 aa16.4■□□□□ 0.22
PDCD1-201ENST00000334409 POLG2Q9UHN1 485 aa16.4■□□□□ 0.22
PDCD1-201ENST00000334409 PEX16Q9Y5Y5 336 aa16.4■□□□□ 0.22
PDCD1-201ENST00000334409 STON1Q9Y6Q2 735 aa16.4■□□□□ 0.22
PDCD1-201ENST00000334409 ZFC3H1O60293 1989 aaKnown RBP16.4■□□□□ 0.22
PDCD1-201ENST00000334409 LOC100130705A0A1B0GUX0 176 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 HMX3A6NHT5 357 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 PTGES3LE9PB15 166 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 SIX3O95343 332 aaPredicted RBP16.39■□□□□ 0.21
PDCD1-201ENST00000334409 MSL3P1P0C860 447 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 HNF1BP35680 557 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 FOXA1P55317 472 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 LSM3P62310 102 aaKnown RBP16.39■□□□□ 0.21
PDCD1-201ENST00000334409 TAGLNQ01995 201 aaKnown RBP16.39■□□□□ 0.21
PDCD1-201ENST00000334409 PIGFQ07326 219 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 LCP2Q13094 533 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 TDGQ13569 410 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 TPRG1LQ5T0D9 272 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 FAM219BQ5XKK7 198 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.39■□□□□ 0.21
PDCD1-201ENST00000334409 TSPAN33Q86UF1 283 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 KIAA1191Q96A73 305 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 TMCO6Q96DC7 493 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 UGT2B28Q9BY64 529 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 AMBRA1Q9C0C7 1298 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 CATSPERZQ9NTU4 200 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 MUC22E2RYF6 1773 aaPredicted RBP16.39■□□□□ 0.21
PDCD1-201ENST00000334409 EDDM13A0A1B0GTR0 161 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 H3BMM5 538 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 ERVH48-1M5A8F1 160 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 KPNA3O00505 521 aaPredicted RBP16.39■□□□□ 0.21
PDCD1-201ENST00000334409 PPP6CO00743 305 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 SOCS5O75159 536 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 PRR35P0CG20 571 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 ITGAMP11215 1152 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 AGXTP21549 392 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 ALDH4A1P30038 563 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 KIR2DL1P43626 348 aaPredicted RBP16.39■□□□□ 0.21
PDCD1-201ENST00000334409 KCNAB2Q13303 367 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 SEMA3AQ14563 771 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 NUDT18Q6ZVK8 323 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 OR4L1Q8NH43 312 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 STAG3L4Q8TBR4 150 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 FCGR1BQ92637 280 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 TUBGCP3Q96CW5 907 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 EID2BQ96D98 161 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 FAM129BQ96TA1 746 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 ZNF717Q9BY31 904 aaPredicted RBP16.39■□□□□ 0.21
PDCD1-201ENST00000334409 DERL2Q9GZP9 239 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 PRSS16Q9NQE7 514 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 ACOXLQ9NUZ1 547 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 LEF1Q9UJU2 399 aaPredicted RBP16.39■□□□□ 0.21
PDCD1-201ENST00000334409 NUP50Q9UKX7 468 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 CA14Q9ULX7 337 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 NDRG2Q9UN36 371 aaKnown RBP16.39■□□□□ 0.21
PDCD1-201ENST00000334409 PCDHGA10Q9Y5H3 936 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 ORC6Q9Y5N6 252 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 GPR45Q9Y5Y3 372 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 PTGDR2Q9Y5Y4 395 aa16.39■□□□□ 0.21
PDCD1-201ENST00000334409 SHISA7A6NL88 538 aa16.38■□□□□ 0.21
PDCD1-201ENST00000334409 LOC730098B7Z3J9 87 aa16.38■□□□□ 0.21
PDCD1-201ENST00000334409 EEDO75530 441 aaKnown RBP16.38■□□□□ 0.21
PDCD1-201ENST00000334409 CLDN7O95471 211 aa16.38■□□□□ 0.21
PDCD1-201ENST00000334409 ANGPTL1O95841 491 aa16.38■□□□□ 0.21
PDCD1-201ENST00000334409 PCNAP12004 261 aa16.38■□□□□ 0.21
PDCD1-201ENST00000334409 HGFP14210 728 aa16.38■□□□□ 0.21
PDCD1-201ENST00000334409 NCK1P16333 377 aa16.38■□□□□ 0.21
PDCD1-201ENST00000334409 ALOX12P18054 663 aa16.38■□□□□ 0.21
PDCD1-201ENST00000334409 CHRM3P20309 590 aa16.38■□□□□ 0.21
PDCD1-201ENST00000334409 HRH2P25021 359 aa16.38■□□□□ 0.21
PDCD1-201ENST00000334409 PSMB9P28065 219 aa16.38■□□□□ 0.21
PDCD1-201ENST00000334409 RPS5P46782 204 aaKnown RBP16.38■□□□□ 0.21
PDCD1-201ENST00000334409 STC1P52823 247 aa16.38■□□□□ 0.21
PDCD1-201ENST00000334409 CDK5R2Q13319 367 aa16.38■□□□□ 0.21
PDCD1-201ENST00000334409 RPS6KA2Q15349 733 aa16.38■□□□□ 0.21
PDCD1-201ENST00000334409 PYCR3Q53H96 274 aa16.38■□□□□ 0.21
PDCD1-201ENST00000334409 TPRG1Q6ZUI0 275 aa16.38■□□□□ 0.21
PDCD1-201ENST00000334409 EFL1Q7Z2Z2 1120 aaKnown RBP16.38■□□□□ 0.21
PDCD1-201ENST00000334409 NOXA1Q86UR1 476 aa16.38■□□□□ 0.21
PDCD1-201ENST00000334409 IFNEQ86WN2 208 aa16.38■□□□□ 0.21
PDCD1-201ENST00000334409 PARP16Q8N5Y8 322 aa16.38■□□□□ 0.21
PDCD1-201ENST00000334409 CELF2-AS1Q8N7Q2 184 aa16.38■□□□□ 0.21
PDCD1-201ENST00000334409 FAM83FQ8NEG4 500 aaPredicted RBP16.38■□□□□ 0.21
PDCD1-201ENST00000334409 OR4K2Q8NGD2 314 aa16.38■□□□□ 0.21
PDCD1-201ENST00000334409 POP5Q969H6 163 aaKnown RBP16.38■□□□□ 0.21
PDCD1-201ENST00000334409 NSUN5Q96P11 429 aaKnown RBP16.38■□□□□ 0.21
PDCD1-201ENST00000334409 NUSAP1Q9BXS6 441 aaKnown RBP16.38■□□□□ 0.21
PDCD1-201ENST00000334409 PAQR5Q9NXK6 330 aaPredicted RBP16.38■□□□□ 0.21
PDCD1-201ENST00000334409 FBXL12Q9NXK8 326 aa16.38■□□□□ 0.21
PDCD1-201ENST00000334409 COL4A2P08572 1712 aa16.38■□□□□ 0.21
PDCD1-201ENST00000334409 NPIPB15A6NHN6 443 aaPredicted RBP16.37■□□□□ 0.21
PDCD1-201ENST00000334409 LRRC14BA6NHZ5 514 aa16.37■□□□□ 0.21
PDCD1-201ENST00000334409 AXIN1O15169 862 aa16.37■□□□□ 0.21
PDCD1-201ENST00000334409 TRBC1P01850 177 aa16.37■□□□□ 0.21
PDCD1-201ENST00000334409 ITGA2P17301 1181 aa16.37■□□□□ 0.21
PDCD1-201ENST00000334409 CLK1P49759 484 aaKnown RBP16.37■□□□□ 0.21
PDCD1-201ENST00000334409 VASPP50552 380 aaPredicted RBP16.37■□□□□ 0.21
PDCD1-201ENST00000334409 KCNK10P57789 538 aa16.37■□□□□ 0.21
PDCD1-201ENST00000334409 SLC35A2P78381 396 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms