RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 KCNMB2Q9Y691 235 aa13.33□□□□□ -0.28
LIMS1-201ENST00000332345 SCN3AQ9NY46 2000 aa13.33□□□□□ -0.28
LIMS1-201ENST00000332345 IGSF10Q6WRI0 2623 aa13.32□□□□□ -0.28
LIMS1-201ENST00000332345 A0A0A6YYC8 382 aaPredicted RBP13.32□□□□□ -0.28
LIMS1-201ENST00000332345 URADA6NGE7 173 aa13.32□□□□□ -0.28
LIMS1-201ENST00000332345 H0YIG0 161 aa13.32□□□□□ -0.28
LIMS1-201ENST00000332345 I3L1I5 382 aaPredicted RBP13.32□□□□□ -0.28
LIMS1-201ENST00000332345 K7EPI3 171 aa13.32□□□□□ -0.28
LIMS1-201ENST00000332345 PEX12O00623 359 aa13.32□□□□□ -0.28
LIMS1-201ENST00000332345 P2RX6O15547 441 aa13.32□□□□□ -0.28
LIMS1-201ENST00000332345 NDUFS4O43181 175 aa13.32□□□□□ -0.28
LIMS1-201ENST00000332345 SERPIND1P05546 499 aa13.32□□□□□ -0.28
LIMS1-201ENST00000332345 MTHFD2P13995 350 aa13.32□□□□□ -0.28
LIMS1-201ENST00000332345 ALDH18A1P54886 795 aaKnown RBP13.32□□□□□ -0.28
LIMS1-201ENST00000332345 REEP5Q00765 189 aa13.32□□□□□ -0.28
LIMS1-201ENST00000332345 LAPTM5Q13571 262 aa13.32□□□□□ -0.28
LIMS1-201ENST00000332345 IL10RAQ13651 578 aa13.32□□□□□ -0.28
LIMS1-201ENST00000332345 DSG2Q14126 1118 aa13.32□□□□□ -0.28
LIMS1-201ENST00000332345 NKG7Q16617 165 aa13.32□□□□□ -0.28
LIMS1-201ENST00000332345 HIST2H2ACQ16777 129 aaPredicted RBP13.32□□□□□ -0.28
LIMS1-201ENST00000332345 PFKFB4Q16877 469 aa13.32□□□□□ -0.28
LIMS1-201ENST00000332345 FBXO48Q5FWF7 155 aa13.32□□□□□ -0.28
LIMS1-201ENST00000332345 FAM69BQ5VUD6 431 aa13.32□□□□□ -0.28
LIMS1-201ENST00000332345 HIST2H2AA3Q6FI13 130 aa13.32□□□□□ -0.28
LIMS1-201ENST00000332345 TMEM214Q6NUQ4 689 aaKnown RBP13.32□□□□□ -0.28
LIMS1-201ENST00000332345 NIPAL1Q6NVV3 410 aa13.32□□□□□ -0.28
LIMS1-201ENST00000332345 WDR93Q6P2C0 686 aa13.32□□□□□ -0.28
LIMS1-201ENST00000332345 PCSK4Q6UW60 755 aa13.32□□□□□ -0.28
LIMS1-201ENST00000332345 LRRC70Q7Z2Q7 622 aa13.32□□□□□ -0.28
LIMS1-201ENST00000332345 PLD6Q8N2A8 252 aaKnown RBP13.32□□□□□ -0.28
LIMS1-201ENST00000332345 ARHGEF39Q8N4T4 335 aa13.32□□□□□ -0.28
LIMS1-201ENST00000332345 ESAMQ96AP7 390 aa13.32□□□□□ -0.28
LIMS1-201ENST00000332345 PHF12Q96QT6 1004 aa13.32□□□□□ -0.28
LIMS1-201ENST00000332345 MACROD1Q9BQ69 325 aa13.32□□□□□ -0.28
LIMS1-201ENST00000332345 ADNPQ9H2P0 1102 aa13.32□□□□□ -0.28
LIMS1-201ENST00000332345 NT5DC2Q9H857 520 aa13.32□□□□□ -0.28
LIMS1-201ENST00000332345 ANKHQ9HCJ1 492 aa13.32□□□□□ -0.28
LIMS1-201ENST00000332345 OPTCQ9UBM4 332 aa13.32□□□□□ -0.28
LIMS1-201ENST00000332345 TMCO1Q9UM00 188 aa13.32□□□□□ -0.28
LIMS1-201ENST00000332345 TNPO3Q9Y5L0 923 aaKnown RBP13.32□□□□□ -0.28
LIMS1-201ENST00000332345 SLC22A7Q9Y694 548 aa13.32□□□□□ -0.28
LIMS1-201ENST00000332345 CACNA1GO43497 2377 aa13.31□□□□□ -0.28
LIMS1-201ENST00000332345 VSTM2BA6NLU5 285 aa13.31□□□□□ -0.28
LIMS1-201ENST00000332345 FOXS1O43638 330 aa13.31□□□□□ -0.28
LIMS1-201ENST00000332345 CNOT3O75175 753 aaKnown RBP13.31□□□□□ -0.28
LIMS1-201ENST00000332345 RFPL1O75677 317 aa13.31□□□□□ -0.28
LIMS1-201ENST00000332345 NSA2O95478 260 aaKnown RBP13.31□□□□□ -0.28
LIMS1-201ENST00000332345 IGHEP01854 428 aa13.31□□□□□ -0.28
LIMS1-201ENST00000332345 STATHP02808 62 aa13.31□□□□□ -0.28
LIMS1-201ENST00000332345 EPB42P16452 691 aa13.31□□□□□ -0.28
LIMS1-201ENST00000332345 VARSP26640 1264 aaKnown RBP13.31□□□□□ -0.28
LIMS1-201ENST00000332345 GSTM2P28161 218 aa13.31□□□□□ -0.28
LIMS1-201ENST00000332345 OTX2P32243 289 aa13.31□□□□□ -0.28
LIMS1-201ENST00000332345 RRADP55042 308 aa13.31□□□□□ -0.28
LIMS1-201ENST00000332345 POLE2P56282 527 aa13.31□□□□□ -0.28
LIMS1-201ENST00000332345 VSNL1P62760 191 aa13.31□□□□□ -0.28
LIMS1-201ENST00000332345 SKP1P63208 163 aa13.31□□□□□ -0.28
LIMS1-201ENST00000332345 LY6DQ14210 128 aa13.31□□□□□ -0.28
LIMS1-201ENST00000332345 HERC3Q15034 1050 aa13.31□□□□□ -0.28
LIMS1-201ENST00000332345 XKR6Q5GH73 641 aa13.31□□□□□ -0.28
LIMS1-201ENST00000332345 PAGE2BQ5JRK9 111 aa13.31□□□□□ -0.28
LIMS1-201ENST00000332345 METTL2BQ6P1Q9 378 aaKnown RBP13.31□□□□□ -0.28
LIMS1-201ENST00000332345 TMIGD1Q6UXZ0 262 aa13.31□□□□□ -0.28
LIMS1-201ENST00000332345 MED25Q71SY5 747 aa13.31□□□□□ -0.28
LIMS1-201ENST00000332345 COX15Q7KZN9 410 aa13.31□□□□□ -0.28
LIMS1-201ENST00000332345 LCA5Q86VQ0 697 aa13.31□□□□□ -0.28
LIMS1-201ENST00000332345 APLFQ8IW19 511 aaPredicted RBP13.31□□□□□ -0.28
LIMS1-201ENST00000332345 DTWD1Q8N5C7 304 aa13.31□□□□□ -0.28
LIMS1-201ENST00000332345 EXD3Q8N9H8 876 aa13.31□□□□□ -0.28
LIMS1-201ENST00000332345 TMEM102Q8N9M5 508 aaPredicted RBP13.31□□□□□ -0.28
LIMS1-201ENST00000332345 KCT2Q8NC54 265 aa13.31□□□□□ -0.28
LIMS1-201ENST00000332345 NT5CQ8TCD5 201 aa13.31□□□□□ -0.28
LIMS1-201ENST00000332345 STT3BQ8TCJ2 826 aa13.31□□□□□ -0.28
LIMS1-201ENST00000332345 ACMSDQ8TDX5 336 aa13.31□□□□□ -0.28
LIMS1-201ENST00000332345 ADAMTS17Q8TE56 1095 aa13.31□□□□□ -0.28
LIMS1-201ENST00000332345 UBTD2Q8WUN7 234 aa13.31□□□□□ -0.28
LIMS1-201ENST00000332345 MIEF2Q96C03 454 aa13.31□□□□□ -0.28
LIMS1-201ENST00000332345 PTCD3Q96EY7 689 aaKnown RBP13.31□□□□□ -0.28
LIMS1-201ENST00000332345 SEC16BQ96JE7 1060 aa13.31□□□□□ -0.28
LIMS1-201ENST00000332345 VPS50Q96JG6 964 aa13.31□□□□□ -0.28
LIMS1-201ENST00000332345 BBC3Q96PG8 261 aaPredicted RBP13.31□□□□□ -0.28
LIMS1-201ENST00000332345 MRPL57Q9BQC6 102 aaKnown RBP13.31□□□□□ -0.28
LIMS1-201ENST00000332345 EFCAB11Q9BUY7 163 aa13.31□□□□□ -0.28
LIMS1-201ENST00000332345 MKKSQ9NPJ1 570 aaPredicted RBP13.31□□□□□ -0.28
LIMS1-201ENST00000332345 ZNF358Q9NW07 568 aa13.31□□□□□ -0.28
LIMS1-201ENST00000332345 GEMIN8Q9NWZ8 242 aaKnown RBP13.31□□□□□ -0.28
LIMS1-201ENST00000332345 TRPC4Q9UBN4 977 aa13.31□□□□□ -0.28
LIMS1-201ENST00000332345 TBK1Q9UHD2 729 aa13.31□□□□□ -0.28
LIMS1-201ENST00000332345 TUBD1Q9UJT1 453 aa13.31□□□□□ -0.28
LIMS1-201ENST00000332345 MAP4K5Q9Y4K4 846 aa13.31□□□□□ -0.28
LIMS1-201ENST00000332345 ANGPTL3Q9Y5C1 460 aa13.31□□□□□ -0.28
LIMS1-201ENST00000332345 IGLV3-12A0A075B6K2 115 aa13.3□□□□□ -0.28
LIMS1-201ENST00000332345 ANKDD1BA6NHY2 528 aa13.3□□□□□ -0.28
LIMS1-201ENST00000332345 KLK8O60259 260 aa13.3□□□□□ -0.28
LIMS1-201ENST00000332345 SMIM24O75264 130 aa13.3□□□□□ -0.28
LIMS1-201ENST00000332345 UMODP07911 640 aa13.3□□□□□ -0.28
LIMS1-201ENST00000332345 SERPINA6P08185 405 aa13.3□□□□□ -0.28
LIMS1-201ENST00000332345 ZGLP1P0C6A0 271 aa13.3□□□□□ -0.28
LIMS1-201ENST00000332345 FAM87AP0C7U9 286 aa13.3□□□□□ -0.28
LIMS1-201ENST00000332345 MMP11P24347 488 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms