RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 RHPN2P1A8MT19 583 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 PDLIM1O00151 329 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 GNGT2O14610 69 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 NME6O75414 186 aaPredicted RBP15.29■□□□□ 0.04
PDGFB-201ENST00000331163 APBB3O95704 486 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 TACR1P25103 407 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 DNAJB13P59910 316 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 PSME3P61289 254 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 C2orf80Q0P641 193 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 PPP1R8Q12972 351 aaKnown RBP15.29■□□□□ 0.04
PDGFB-201ENST00000331163 CCINQ13939 588 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 MAPRE2Q15555 327 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 TMEM52BQ4KMG9 183 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 CCNYL2Q5T2Q4 361 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 OR2T11Q8NH01 316 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 CYGBQ8WWM9 190 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 PANX1Q96RD7 426 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 RMI1Q9H9A7 625 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 TRPC4Q9UBN4 977 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 CDC14AQ9UNH5 594 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 SH2B3Q9UQQ2 575 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 CEPT1Q9Y6K0 416 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 MUC6Q6W4X9 2439 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 ANHXE9PGG2 379 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 ARNTLO00327 626 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 PPM1DO15297 605 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 ERI3O43414 337 aaKnown RBP15.29■□□□□ 0.04
PDGFB-201ENST00000331163 TIPRLO75663 272 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 NEDD8Q15843 81 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 OR4F3Q6IEY1 312 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 GPR141Q7Z602 305 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 PLPP6Q8IY26 295 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 KRT78Q8N1N4 520 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 ZBTB8BQ8NAP8 495 aaPredicted RBP15.29■□□□□ 0.04
PDGFB-201ENST00000331163 SLAMF8Q9P0V8 285 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 RNF103-CHMP3A0A140T963 221 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 PIPSLA2A3N6 862 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 PLOD2O00469 737 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 SOD1P00441 154 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 ALDOCP09972 364 aaKnown RBP15.29■□□□□ 0.04
PDGFB-201ENST00000331163 EEF1B2P24534 225 aaKnown RBP15.29■□□□□ 0.04
PDGFB-201ENST00000331163 EMP3P54852 163 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 DMWDQ09019 674 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 CYP51A1Q16850 503 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 C11orf74Q86VG3 221 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 TMEM132CQ8N3T6 1108 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 SLC5A11Q8WWX8 675 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 GLMNQ92990 594 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 BMFQ96LC9 184 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 PPP3R2Q96LZ3 170 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 CAMK1GQ96NX5 476 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 TGM7Q96PF1 710 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 AIF1LQ9BQI0 150 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 C1orf109Q9NX04 203 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 SPHK1Q9NYA1 384 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 SCHIP1Q9P0W5 487 aaPredicted RBP15.29■□□□□ 0.04
PDGFB-201ENST00000331163 RAB26Q9ULW5 256 aa15.29■□□□□ 0.04
PDGFB-201ENST00000331163 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.29■□□□□ 0.04
PDGFB-201ENST00000331163 FAM86C2PA6NEL3 165 aa15.28■□□□□ 0.04
PDGFB-201ENST00000331163 E7ENX8 843 aa15.28■□□□□ 0.04
PDGFB-201ENST00000331163 STX16O14662 325 aa15.28■□□□□ 0.04
PDGFB-201ENST00000331163 COQ9O75208 318 aa15.28■□□□□ 0.04
PDGFB-201ENST00000331163 ANXA6P08133 673 aa15.28■□□□□ 0.04
PDGFB-201ENST00000331163 TCF3P15923 654 aa15.28■□□□□ 0.04
PDGFB-201ENST00000331163 POLR2JP52435 117 aaKnown RBP15.28■□□□□ 0.04
PDGFB-201ENST00000331163 MC1RQ01726 317 aa15.28■□□□□ 0.04
PDGFB-201ENST00000331163 HHEXQ03014 270 aa15.28■□□□□ 0.04
PDGFB-201ENST00000331163 TAP2Q03519 686 aa15.28■□□□□ 0.04
PDGFB-201ENST00000331163 NKAIN2Q5VXU1 208 aa15.28■□□□□ 0.04
PDGFB-201ENST00000331163 TTC33Q6PID6 262 aaPredicted RBP15.28■□□□□ 0.04
PDGFB-201ENST00000331163 ZBTB49Q6ZSB9 765 aa15.28■□□□□ 0.04
PDGFB-201ENST00000331163 FNDC8Q8TC99 324 aa15.28■□□□□ 0.04
PDGFB-201ENST00000331163 TEX37Q96LM6 180 aa15.28■□□□□ 0.04
PDGFB-201ENST00000331163 C1QTNF2Q9BXJ5 285 aa15.28■□□□□ 0.04
PDGFB-201ENST00000331163 VPS29Q9UBQ0 182 aa15.28■□□□□ 0.04
PDGFB-201ENST00000331163 ZNF225Q9UK10 706 aa15.28■□□□□ 0.04
PDGFB-201ENST00000331163 PTBP2Q9UKA9 531 aaKnown RBP15.28■□□□□ 0.04
PDGFB-201ENST00000331163 MYRFQ9Y2G1 1151 aa15.28■□□□□ 0.04
PDGFB-201ENST00000331163 RP1P56715 2156 aa15.28■□□□□ 0.04
PDGFB-201ENST00000331163 C7orf72A4D263 438 aa15.28■□□□□ 0.04
PDGFB-201ENST00000331163 ZNF839A8K0R7 811 aa15.28■□□□□ 0.04
PDGFB-201ENST00000331163 PLRG1O43660 514 aaKnown RBP15.28■□□□□ 0.04
PDGFB-201ENST00000331163 FKBP9O95302 570 aa15.28■□□□□ 0.04
PDGFB-201ENST00000331163 RPS17P08708 135 aaKnown RBP15.28■□□□□ 0.04
PDGFB-201ENST00000331163 GSTM1P09488 218 aa15.28■□□□□ 0.04
PDGFB-201ENST00000331163 CBSLP0DN79 551 aa15.28■□□□□ 0.04
PDGFB-201ENST00000331163 CD38P28907 300 aa15.28■□□□□ 0.04
PDGFB-201ENST00000331163 CBSP35520 551 aa15.28■□□□□ 0.04
PDGFB-201ENST00000331163 HK2P52789 917 aa15.28■□□□□ 0.04
PDGFB-201ENST00000331163 DAB2P98082 770 aa15.28■□□□□ 0.04
PDGFB-201ENST00000331163 GSTM4Q03013 218 aa15.28■□□□□ 0.04
PDGFB-201ENST00000331163 SQLEQ14534 574 aa15.28■□□□□ 0.04
PDGFB-201ENST00000331163 FKBP9P1Q75LS8 142 aa15.28■□□□□ 0.04
PDGFB-201ENST00000331163 ZNF438Q7Z4V0 828 aa15.28■□□□□ 0.04
PDGFB-201ENST00000331163 ZNF614Q8N883 585 aa15.28■□□□□ 0.04
PDGFB-201ENST00000331163 OR7A2PQ8NGA2 310 aa15.28■□□□□ 0.04
PDGFB-201ENST00000331163 ISL2Q96A47 359 aa15.28■□□□□ 0.04
PDGFB-201ENST00000331163 YIPF4Q9BSR8 244 aa15.28■□□□□ 0.04
PDGFB-201ENST00000331163 RTKNQ9BST9 563 aa15.28■□□□□ 0.04
PDGFB-201ENST00000331163 SLC25A23Q9BV35 468 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms