RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 REPS1Q96D71 796 aa14.02□□□□□ -0.16
TPM3-206ENST00000330188 DYRK1BQ9Y463 629 aa14.02□□□□□ -0.16
TPM3-206ENST00000330188 MYO1GB0I1T2 1018 aa14.02□□□□□ -0.17
TPM3-206ENST00000330188 PAPLNO95428 1278 aa14.02□□□□□ -0.17
TPM3-206ENST00000330188 C1GALT1C1LP0DN25 315 aa14.02□□□□□ -0.17
TPM3-206ENST00000330188 ZNF8P17098 575 aaPredicted RBP14.02□□□□□ -0.17
TPM3-206ENST00000330188 PPIBP23284 216 aaKnown RBP14.02□□□□□ -0.17
TPM3-206ENST00000330188 VIPR2P41587 438 aa14.02□□□□□ -0.17
TPM3-206ENST00000330188 CRYBA2P53672 197 aa14.02□□□□□ -0.17
TPM3-206ENST00000330188 TMBIM6P55061 237 aa14.02□□□□□ -0.17
TPM3-206ENST00000330188 UBE3AQ05086 875 aa14.02□□□□□ -0.17
TPM3-206ENST00000330188 ELP6Q0PNE2 266 aa14.02□□□□□ -0.17
TPM3-206ENST00000330188 TSTA3Q13630 321 aaPredicted RBP14.02□□□□□ -0.17
TPM3-206ENST00000330188 RGNQ15493 299 aa14.02□□□□□ -0.17
TPM3-206ENST00000330188 ZNF547Q8IVP9 402 aa14.02□□□□□ -0.17
TPM3-206ENST00000330188 LAS2Q8IYD9 372 aa14.02□□□□□ -0.17
TPM3-206ENST00000330188 LRRC56Q8IYG6 542 aaPredicted RBP14.02□□□□□ -0.17
TPM3-206ENST00000330188 BADQ92934 168 aa14.02□□□□□ -0.17
TPM3-206ENST00000330188 TRIT1Q9H3H1 467 aaKnown RBP14.02□□□□□ -0.17
TPM3-206ENST00000330188 PAK1IP1Q9NWT1 392 aaPredicted RBP14.02□□□□□ -0.17
TPM3-206ENST00000330188 SIRT5Q9NXA8 310 aa14.02□□□□□ -0.17
TPM3-206ENST00000330188 ETAA1Q9NY74 926 aa14.02□□□□□ -0.17
TPM3-206ENST00000330188 SH3BP4Q9P0V3 963 aa14.02□□□□□ -0.17
TPM3-206ENST00000330188 ATP6V1HQ9UI12 483 aa14.02□□□□□ -0.17
TPM3-206ENST00000330188 CORO2BQ9UQ03 480 aa14.02□□□□□ -0.17
TPM3-206ENST00000330188 DENND4AQ7Z401 1863 aa14.01□□□□□ -0.17
TPM3-206ENST00000330188 FOXE1O00358 373 aaPredicted RBP14.01□□□□□ -0.17
TPM3-206ENST00000330188 RNASET2O00584 256 aaKnown RBP14.01□□□□□ -0.17
TPM3-206ENST00000330188 MMP20O60882 483 aa14.01□□□□□ -0.17
TPM3-206ENST00000330188 NOL3O60936 208 aaKnown RBP14.01□□□□□ -0.17
TPM3-206ENST00000330188 UGT2B11O75310 529 aa14.01□□□□□ -0.17
TPM3-206ENST00000330188 FKBP9O95302 570 aa14.01□□□□□ -0.17
TPM3-206ENST00000330188 ARHGDIAP52565 204 aa14.01□□□□□ -0.17
TPM3-206ENST00000330188 ITGA1P56199 1179 aa14.01□□□□□ -0.17
TPM3-206ENST00000330188 PIGFQ07326 219 aa14.01□□□□□ -0.17
TPM3-206ENST00000330188 ZNF763Q0D2J5 394 aa14.01□□□□□ -0.17
TPM3-206ENST00000330188 CDK5R2Q13319 367 aa14.01□□□□□ -0.17
TPM3-206ENST00000330188 GAB4Q2WGN9 574 aa14.01□□□□□ -0.17
TPM3-206ENST00000330188 HNRNPA1L2Q32P51 320 aaKnown RBP14.01□□□□□ -0.17
TPM3-206ENST00000330188 IQCCQ4KMZ1 466 aa14.01□□□□□ -0.17
TPM3-206ENST00000330188 PDE12Q6L8Q7 609 aaKnown RBP14.01□□□□□ -0.17
TPM3-206ENST00000330188 ARMCX6Q7L4S7 300 aa14.01□□□□□ -0.17
TPM3-206ENST00000330188 PIWIL3Q7Z3Z3 882 aaKnown RBP14.01□□□□□ -0.17
TPM3-206ENST00000330188 HORMAD1Q86X24 394 aa14.01□□□□□ -0.17
TPM3-206ENST00000330188 OR4A15Q8NGL6 344 aa14.01□□□□□ -0.17
TPM3-206ENST00000330188 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.01□□□□□ -0.172e-8■■■■□ 26.5
TPM3-206ENST00000330188 OR8D1Q8WZ84 308 aa14.01□□□□□ -0.17
TPM3-206ENST00000330188 ZNF566Q969W8 418 aa14.01□□□□□ -0.17
TPM3-206ENST00000330188 CXorf40BQ96DE9 158 aa14.01□□□□□ -0.17
TPM3-206ENST00000330188 NRBF2Q96F24 287 aa14.01□□□□□ -0.17
TPM3-206ENST00000330188 MAGED4Q96JG8 741 aa14.01□□□□□ -0.17
TPM3-206ENST00000330188 ZFYVE19Q96K21 471 aa14.01□□□□□ -0.17
TPM3-206ENST00000330188 LINC00615Q96LM1 132 aaPredicted RBP14.01□□□□□ -0.17
TPM3-206ENST00000330188 EFCAB11Q9BUY7 163 aa14.01□□□□□ -0.17
TPM3-206ENST00000330188 ASPSCR1Q9BZE9 553 aa14.01□□□□□ -0.17
TPM3-206ENST00000330188 BHLHE41Q9C0J9 482 aaPredicted RBP14.01□□□□□ -0.17
TPM3-206ENST00000330188 RIBC2Q9H4K1 309 aa14.01□□□□□ -0.17
TPM3-206ENST00000330188 DMRT3Q9NQL9 472 aa14.01□□□□□ -0.17
TPM3-206ENST00000330188 ZNF282Q9UDV7 671 aaPredicted RBP14.01□□□□□ -0.17
TPM3-206ENST00000330188 NAALAD2Q9Y3Q0 740 aa14.01□□□□□ -0.17
TPM3-206ENST00000330188 EDDM13A0A1B0GTR0 161 aa14□□□□□ -0.17
TPM3-206ENST00000330188 PIPSLA2A3N6 862 aa14□□□□□ -0.17
TPM3-206ENST00000330188 LINC01553A4QN01 128 aa14□□□□□ -0.17
TPM3-206ENST00000330188 ANKRD33BA6NCL7 494 aa14□□□□□ -0.17
TPM3-206ENST00000330188 ABCB1P08183 1280 aaPredicted RBP14□□□□□ -0.17
TPM3-206ENST00000330188 CCDC159P0C7I6 412 aa14□□□□□ -0.17
TPM3-206ENST00000330188 ADRB3P13945 408 aa14□□□□□ -0.17
TPM3-206ENST00000330188 CD247P20963 164 aa14□□□□□ -0.17
TPM3-206ENST00000330188 CLK3P49761 638 aaKnown RBP14□□□□□ -0.17
TPM3-206ENST00000330188 CCR3P51677 355 aa14□□□□□ -0.17
TPM3-206ENST00000330188 MAPK10P53779 464 aa14□□□□□ -0.17
TPM3-206ENST00000330188 IL5RAQ01344 420 aa14□□□□□ -0.17
TPM3-206ENST00000330188 TAP2Q03519 686 aa14□□□□□ -0.17
TPM3-206ENST00000330188 DDX59Q5T1V6 619 aaKnown RBP eCLIP14□□□□□ -0.17
TPM3-206ENST00000330188 COMMD6Q7Z4G1 85 aa14□□□□□ -0.17
TPM3-206ENST00000330188 TRMT11Q7Z4G4 463 aaKnown RBP14□□□□□ -0.17
TPM3-206ENST00000330188 CNIH3Q8TBE1 160 aa14□□□□□ -0.17
TPM3-206ENST00000330188 FAM129BQ96TA1 746 aa14□□□□□ -0.17
TPM3-206ENST00000330188 SPNS1Q9H2V7 528 aa14□□□□□ -0.17
TPM3-206ENST00000330188 EHD1Q9H4M9 534 aa14□□□□□ -0.17
TPM3-206ENST00000330188 REEP4Q9H6H4 257 aa14□□□□□ -0.17
TPM3-206ENST00000330188 TRIM39Q9HCM9 518 aa14□□□□□ -0.17
TPM3-206ENST00000330188 PDP1Q9P0J1 537 aaPredicted RBP14□□□□□ -0.17
TPM3-206ENST00000330188 BAG5Q9UL15 447 aa14□□□□□ -0.17
TPM3-206ENST00000330188 VPS4AQ9UN37 437 aa14□□□□□ -0.17
TPM3-206ENST00000330188 SAMHD1Q9Y3Z3 626 aaKnown RBP14□□□□□ -0.17
TPM3-206ENST00000330188 C17orf113A0A1B0GUU1 675 aa14□□□□□ -0.17
TPM3-206ENST00000330188 OTOL1A6NHN0 477 aaPredicted RBP14□□□□□ -0.17
TPM3-206ENST00000330188 TMEM229AB2RXF0 380 aa14□□□□□ -0.17
TPM3-206ENST00000330188 LZTS3O60299 673 aaPredicted RBP14□□□□□ -0.17
TPM3-206ENST00000330188 CYP4B1P13584 511 aa14□□□□□ -0.17
TPM3-206ENST00000330188 PCMT1P22061 227 aa14□□□□□ -0.17
TPM3-206ENST00000330188 ACADLP28330 430 aa14□□□□□ -0.17
TPM3-206ENST00000330188 PCGF2P35227 344 aa14□□□□□ -0.17
TPM3-206ENST00000330188 ENTPD1P49961 510 aa14□□□□□ -0.17
TPM3-206ENST00000330188 RPS6KA3P51812 740 aa14□□□□□ -0.17
TPM3-206ENST00000330188 PLA2G16P53816 162 aa14□□□□□ -0.17
TPM3-206ENST00000330188 KCNJ10P78508 379 aa14□□□□□ -0.17
TPM3-206ENST00000330188 FPGSQ05932 587 aa14□□□□□ -0.17
TPM3-206ENST00000330188 DPTQ07507 201 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms