RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 MASP2O00187 686 aa26.19■■□□□ 1.78
ATPAF1-201ENST00000329231 MAP2K7O14733 419 aa26.19■■□□□ 1.78
ATPAF1-201ENST00000329231 WDR47O94967 919 aa26.19■■□□□ 1.78
ATPAF1-201ENST00000329231 WISP1O95388 367 aa26.19■■□□□ 1.78
ATPAF1-201ENST00000329231 NCF1P14598 390 aaPredicted RBP26.19■■□□□ 1.78
ATPAF1-201ENST00000329231 ACPPP15309 386 aa26.19■■□□□ 1.78
ATPAF1-201ENST00000329231 PWP1Q13610 501 aa26.19■■□□□ 1.78
ATPAF1-201ENST00000329231 COLEC12Q5KU26 742 aa26.19■■□□□ 1.78
ATPAF1-201ENST00000329231 NXPE4Q6UWF7 544 aa26.19■■□□□ 1.78
ATPAF1-201ENST00000329231 TMPRSS11BQ86T26 416 aa26.19■■□□□ 1.78
ATPAF1-201ENST00000329231 KLHDC8AQ8IYD2 350 aa26.19■■□□□ 1.78
ATPAF1-201ENST00000329231 ZCCHC10Q8TBK6 192 aa26.19■■□□□ 1.78
ATPAF1-201ENST00000329231 CYTH2Q99418 400 aa26.19■■□□□ 1.78
ATPAF1-201ENST00000329231 L2HGDHQ9H9P8 463 aa26.19■■□□□ 1.78
ATPAF1-201ENST00000329231 SLC22A7Q9Y694 548 aa26.19■■□□□ 1.78
ATPAF1-201ENST00000329231 PCDH17O14917 1159 aa26.18■■□□□ 1.78
ATPAF1-201ENST00000329231 NDUFS4O43181 175 aa26.18■■□□□ 1.78
ATPAF1-201ENST00000329231 IPO13O94829 963 aaKnown RBP26.18■■□□□ 1.78
ATPAF1-201ENST00000329231 HEXBP07686 556 aa26.18■■□□□ 1.78
ATPAF1-201ENST00000329231 IL1RNP18510 177 aa26.18■■□□□ 1.78
ATPAF1-201ENST00000329231 ITGA3P26006 1051 aa26.18■■□□□ 1.78
ATPAF1-201ENST00000329231 AHRP35869 848 aa26.18■■□□□ 1.78
ATPAF1-201ENST00000329231 SCTRP47872 440 aa26.18■■□□□ 1.78
ATPAF1-201ENST00000329231 SLC6A12P48065 614 aa26.18■■□□□ 1.78
ATPAF1-201ENST00000329231 CSRP3P50461 194 aa26.18■■□□□ 1.78
ATPAF1-201ENST00000329231 SNRPNP63162 240 aaKnown RBP26.18■■□□□ 1.78
ATPAF1-201ENST00000329231 MAT1AQ00266 395 aaKnown RBP26.18■■□□□ 1.78
ATPAF1-201ENST00000329231 REEP5Q00765 189 aa26.18■■□□□ 1.78
ATPAF1-201ENST00000329231 SYT16Q17RD7 645 aa26.18■■□□□ 1.78
ATPAF1-201ENST00000329231 IRAK1BP1Q5VVH5 260 aa26.18■■□□□ 1.78
ATPAF1-201ENST00000329231 ATG9BQ674R7 924 aa26.18■■□□□ 1.78
ATPAF1-201ENST00000329231 CMC1Q7Z7K0 106 aa26.18■■□□□ 1.78
ATPAF1-201ENST00000329231 ZNF740Q8NDX6 193 aa26.18■■□□□ 1.78
ATPAF1-201ENST00000329231 KIAA1191Q96A73 305 aa26.18■■□□□ 1.78
ATPAF1-201ENST00000329231 FMO2Q99518 471 aa26.18■■□□□ 1.78
ATPAF1-201ENST00000329231 CNOT10Q9H9A5 744 aaKnown RBP26.18■■□□□ 1.78
ATPAF1-201ENST00000329231 WWOXQ9NZC7 414 aa26.18■■□□□ 1.78
ATPAF1-201ENST00000329231 NINJ2Q9NZG7 142 aa26.18■■□□□ 1.78
ATPAF1-201ENST00000329231 ZFP69BQ9UJL9 534 aa26.18■■□□□ 1.78
ATPAF1-201ENST00000329231 TNRC6AQ8NDV7 1962 aaKnown RBP26.17■■□□□ 1.78
ATPAF1-201ENST00000329231 SERPIND1P05546 499 aa26.17■■□□□ 1.78
ATPAF1-201ENST00000329231 SLC35E2BP0CK96 405 aa26.17■■□□□ 1.78
ATPAF1-201ENST00000329231 GNAZP19086 355 aa26.17■■□□□ 1.78
ATPAF1-201ENST00000329231 CXCR2P25025 360 aa26.17■■□□□ 1.78
ATPAF1-201ENST00000329231 GDF5P43026 501 aa26.17■■□□□ 1.78
ATPAF1-201ENST00000329231 RGS1Q08116 209 aa26.17■■□□□ 1.78
ATPAF1-201ENST00000329231 HERC3Q15034 1050 aa26.17■■□□□ 1.78
ATPAF1-201ENST00000329231 OR4D1Q15615 310 aa26.17■■□□□ 1.78
ATPAF1-201ENST00000329231 C18orf21Q32NC0 220 aaPredicted RBP26.17■■□□□ 1.78
ATPAF1-201ENST00000329231 SULT1C3Q6IMI6 304 aa26.17■■□□□ 1.78
ATPAF1-201ENST00000329231 PRSS41Q7RTY9 318 aa26.17■■□□□ 1.78
ATPAF1-201ENST00000329231 TBC1D1Q86TI0 1168 aaPredicted RBP26.17■■□□□ 1.78
ATPAF1-201ENST00000329231 ZC3H7AQ8IWR0 971 aaKnown RBP26.17■■□□□ 1.78
ATPAF1-201ENST00000329231 CAPS2Q9BXY5 557 aa26.17■■□□□ 1.78
ATPAF1-201ENST00000329231 SPNS1Q9H2V7 528 aa26.17■■□□□ 1.78
ATPAF1-201ENST00000329231 ZNF552Q9H707 407 aaPredicted RBP26.17■■□□□ 1.78
ATPAF1-201ENST00000329231 NMRAL1Q9HBL8 299 aa26.17■■□□□ 1.78
ATPAF1-201ENST00000329231 CD274Q9NZQ7 290 aa26.17■■□□□ 1.78
ATPAF1-201ENST00000329231 RNF112Q9ULX5 631 aa26.17■■□□□ 1.78
ATPAF1-201ENST00000329231 SGK494L7N484 410 aa26.16■■□□□ 1.78
ATPAF1-201ENST00000329231 BMP10O95393 424 aa26.16■■□□□ 1.78
ATPAF1-201ENST00000329231 HPP00738 406 aa26.16■■□□□ 1.78
ATPAF1-201ENST00000329231 GGT5P36269 586 aa26.16■■□□□ 1.78
ATPAF1-201ENST00000329231 KCNC4Q03721 635 aa26.16■■□□□ 1.78
ATPAF1-201ENST00000329231 NADK2Q4G0N4 442 aa26.16■■□□□ 1.78
ATPAF1-201ENST00000329231 CCDC91Q7Z6B0 441 aa26.16■■□□□ 1.78
ATPAF1-201ENST00000329231 OR51Q1Q8NH59 317 aa26.16■■□□□ 1.78
ATPAF1-201ENST00000329231 STAG3L4Q8TBR4 150 aa26.16■■□□□ 1.78
ATPAF1-201ENST00000329231 MRRFQ96E11 262 aaKnown RBP26.16■■□□□ 1.78
ATPAF1-201ENST00000329231 ACSS3Q9H6R3 686 aa26.16■■□□□ 1.78
ATPAF1-201ENST00000329231 MKL2Q9ULH7 1088 aa26.16■■□□□ 1.78
ATPAF1-201ENST00000329231 ZNF500O60304 480 aaPredicted RBP26.15■■□□□ 1.78
ATPAF1-201ENST00000329231 ALOX12BO75342 701 aa26.15■■□□□ 1.78
ATPAF1-201ENST00000329231 H2AFYO75367 372 aaKnown RBP26.15■■□□□ 1.78
ATPAF1-201ENST00000329231 S100BP04271 92 aaPredicted RBP26.15■■□□□ 1.78
ATPAF1-201ENST00000329231 ECHS1P30084 290 aa26.15■■□□□ 1.78
ATPAF1-201ENST00000329231 SKP1P63208 163 aa26.15■■□□□ 1.78
ATPAF1-201ENST00000329231 CDC16Q13042 620 aa26.15■■□□□ 1.78
ATPAF1-201ENST00000329231 RBBP5Q15291 538 aaKnown RBP26.15■■□□□ 1.78
ATPAF1-201ENST00000329231 NIPAL1Q6NVV3 410 aa26.15■■□□□ 1.78
ATPAF1-201ENST00000329231 IFT20Q8IY31 132 aa26.15■■□□□ 1.78
ATPAF1-201ENST00000329231 PDPRQ8NCN5 879 aa26.15■■□□□ 1.78
ATPAF1-201ENST00000329231 TRPV3Q8NET8 790 aa26.15■■□□□ 1.78
ATPAF1-201ENST00000329231 NT5CQ8TCD5 201 aa26.15■■□□□ 1.78
ATPAF1-201ENST00000329231 TM9SF4Q92544 642 aa26.15■■□□□ 1.78
ATPAF1-201ENST00000329231 C8orf44Q96CB5 159 aa26.15■■□□□ 1.78
ATPAF1-201ENST00000329231 MOCOSQ96EN8 888 aa26.15■■□□□ 1.78
ATPAF1-201ENST00000329231 GPRC5BQ9NZH0 403 aa26.15■■□□□ 1.78
ATPAF1-201ENST00000329231 HCN3Q9P1Z3 774 aa26.15■■□□□ 1.78
ATPAF1-201ENST00000329231 ACOT9Q9Y305 439 aa26.15■■□□□ 1.78
ATPAF1-201ENST00000329231 NAALAD2Q9Y3Q0 740 aa26.15■■□□□ 1.78
ATPAF1-201ENST00000329231 TAPBPO15533 448 aa26.14■■□□□ 1.78
ATPAF1-201ENST00000329231 KLHL18O94889 574 aa26.14■■□□□ 1.78
ATPAF1-201ENST00000329231 LTA4HP09960 611 aaKnown RBP26.14■■□□□ 1.78
ATPAF1-201ENST00000329231 C1GALT1C1LP0DN25 315 aa26.14■■□□□ 1.78
ATPAF1-201ENST00000329231 UAP1Q16222 522 aaPredicted RBP26.14■■□□□ 1.78
ATPAF1-201ENST00000329231 MROH9Q5TGP6 573 aa26.14■■□□□ 1.78
ATPAF1-201ENST00000329231 NDUFAF7Q7L592 441 aa26.14■■□□□ 1.78
ATPAF1-201ENST00000329231 PDSS2Q86YH6 399 aa26.14■■□□□ 1.78
ATPAF1-201ENST00000329231 PARP9Q8IXQ6 854 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms