RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 USP36Q9P275 1121 aaKnown RBP14.34□□□□□ -0.11
TPM3-205ENST00000328159 CNOT11Q9UKZ1 510 aaKnown RBP14.34□□□□□ -0.11
TPM3-205ENST00000328159 HEBP2Q9Y5Z4 205 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 HEATR5BQ9P2D3 2071 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 ELOVL7A1L3X0 281 aa14.33□□□□□ -0.12
TPM3-205ENST00000328159 ANKDD1BA6NHY2 528 aa14.33□□□□□ -0.12
TPM3-205ENST00000328159 H7BY64 318 aa14.33□□□□□ -0.12
TPM3-205ENST00000328159 YY2O15391 372 aa14.33□□□□□ -0.12
TPM3-205ENST00000328159 CPSF4O95639 269 aaKnown RBP14.33□□□□□ -0.12
TPM3-205ENST00000328159 BMP2P12643 396 aa14.33□□□□□ -0.12
TPM3-205ENST00000328159 SERPINB1P30740 379 aa14.33□□□□□ -0.12
TPM3-205ENST00000328159 GZMMP51124 257 aa14.33□□□□□ -0.12
TPM3-205ENST00000328159 KLC1Q07866 573 aa14.33□□□□□ -0.12
TPM3-205ENST00000328159 TDGQ13569 410 aa14.33□□□□□ -0.12
TPM3-205ENST00000328159 MAP7Q14244 749 aa14.33□□□□□ -0.12
TPM3-205ENST00000328159 SKIV2LQ15477 1246 aaKnown RBP14.33□□□□□ -0.12
TPM3-205ENST00000328159 RD3Q7Z3Z2 195 aa14.33□□□□□ -0.12
TPM3-205ENST00000328159 MICU2Q8IYU8 434 aa14.33□□□□□ -0.12
TPM3-205ENST00000328159 ANKFN1Q8N957 763 aa14.33□□□□□ -0.12
TPM3-205ENST00000328159 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.33□□□□□ -0.122e-8■■■■□ 26.5
TPM3-205ENST00000328159 C16orf78Q8WTQ4 265 aa14.33□□□□□ -0.12
TPM3-205ENST00000328159 N4BP2L2Q92802 583 aaPredicted RBP14.33□□□□□ -0.12
TPM3-205ENST00000328159 TSACCQ96A04 125 aaPredicted RBP14.33□□□□□ -0.12
TPM3-205ENST00000328159 COQ8BQ96D53 544 aa14.33□□□□□ -0.12
TPM3-205ENST00000328159 CXorf40BQ96DE9 158 aa14.33□□□□□ -0.12
TPM3-205ENST00000328159 PRAP1Q96NZ9 151 aa14.33□□□□□ -0.12
TPM3-205ENST00000328159 PANX1Q96RD7 426 aa14.33□□□□□ -0.12
TPM3-205ENST00000328159 VCXQ9H320 206 aa14.33□□□□□ -0.12
TPM3-205ENST00000328159 GORASP2Q9H8Y8 452 aa14.33□□□□□ -0.12
TPM3-205ENST00000328159 MYNNQ9NPC7 610 aa14.33□□□□□ -0.12
TPM3-205ENST00000328159 ATP6V1HQ9UI12 483 aa14.33□□□□□ -0.12
TPM3-205ENST00000328159 ICKQ9UPZ9 632 aa14.33□□□□□ -0.12
TPM3-205ENST00000328159 EXO1Q9UQ84 846 aaKnown RBP14.33□□□□□ -0.12
TPM3-205ENST00000328159 XIRP2A4UGR9 3374 aa14.33□□□□□ -0.12
TPM3-205ENST00000328159 NUP214P35658 2090 aaPredicted RBP14.33□□□□□ -0.12
TPM3-205ENST00000328159 PRAMEF33A0A0G2JMD5 474 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 C10orf142B7Z368 130 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 MAN2B1O00754 1011 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 SCELO95171 688 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 GBAP04062 536 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 FCGR1AP12314 374 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 FASP25445 335 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 YPEL5P62699 121 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 CSNK1G2P78368 415 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 PRDX1Q06830 199 aaKnown RBP14.32□□□□□ -0.12
TPM3-205ENST00000328159 ANXA8L1Q5VT79 327 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 ABRAXAS1Q6UWZ7 409 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 SLC9B2Q86UD5 537 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 CLECL1Q8IZS7 167 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 GALNT4Q8N4A0 578 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 ANKRD53Q8N9V6 530 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 SNX19Q92543 992 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 FIG4Q92562 907 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 NR1H4Q96RI1 486 aaPredicted RBP14.32□□□□□ -0.12
TPM3-205ENST00000328159 REEP4Q9H6H4 257 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 COQ10BQ9H8M1 238 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 AGPAT4Q9NRZ5 378 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 TBC1D29Q9UFV1 150 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 BTNL2Q9UIR0 455 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 PCDHB11Q9Y5F2 797 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 TRIOBPQ9H2D6 2365 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 UNC80Q8N2C7 3258 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 FEZF1A0PJY2 475 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 EVPLLA8MZ36 301 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 CXCR6O00574 342 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 TNFRSF10CO14798 259 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 KDM1AO60341 852 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 TPST1O60507 370 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 KLHL18O94889 574 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 TBX6O95947 436 aaPredicted RBP14.32□□□□□ -0.12
TPM3-205ENST00000328159 IGLV3-19P01714 112 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 KLK1P06870 262 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 ZNF26P17031 533 aaPredicted RBP14.32□□□□□ -0.12
TPM3-205ENST00000328159 AK4P27144 223 aaPredicted RBP14.32□□□□□ -0.12
TPM3-205ENST00000328159 DGKEP52429 567 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 CYP4F2P78329 520 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 FOLH1Q04609 750 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 ABHD18Q0P651 414 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 BLMHQ13867 455 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 SMAD2Q15796 467 aaKnown RBP14.32□□□□□ -0.12
TPM3-205ENST00000328159 DEPDC1Q5TB30 811 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 KHDRBS2Q5VWX1 349 aaKnown RBP14.32□□□□□ -0.12
TPM3-205ENST00000328159 WASH2PQ6VEQ5 465 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 ZNF621Q6ZSS3 439 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 C10orf111Q8N326 155 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 VPS37AQ8NEZ2 397 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 OR2A1Q8NGT9 310 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 MS4A8Q9BY19 250 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 BHLHE41Q9C0J9 482 aaPredicted RBP14.32□□□□□ -0.12
TPM3-205ENST00000328159 KIR3DX1Q9H7L2 352 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 AHSPQ9NZD4 102 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 SH3BP4Q9P0V3 963 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 HS3ST3A1Q9Y663 406 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 COLEC10Q9Y6Z7 277 aa14.32□□□□□ -0.12
TPM3-205ENST00000328159 LRP4O75096 1905 aa14.31□□□□□ -0.12
TPM3-205ENST00000328159 H0YJX3 145 aa14.31□□□□□ -0.12
TPM3-205ENST00000328159 CLIC1O00299 241 aa14.31□□□□□ -0.12
TPM3-205ENST00000328159 SEMA3DO95025 777 aa14.31□□□□□ -0.12
TPM3-205ENST00000328159 EPN2O95208 641 aa14.31□□□□□ -0.12
TPM3-205ENST00000328159 EML2O95834 649 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms