RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 FAM46DQ8NEK8 389 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 ABHD11Q8NFV4 315 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 OR2A1Q8NGT9 310 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 ZNF420Q8TAQ5 688 aaPredicted RBP12.27□□□□□ -0.45
DDX39A-202ENST00000324340 WDR20Q8TBZ3 569 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 ADAMTS16Q8TE57 1224 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 SLC37A2Q8TED4 501 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 ZDHHC1Q8WTX9 485 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 RTKNQ9BST9 563 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 EFCAB11Q9BUY7 163 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 XKR8Q9H6D3 395 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 AKTIPQ9H8T0 292 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 PELI2Q9HAT8 420 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 DDX18Q9NVP1 670 aaKnown RBP12.27□□□□□ -0.45
DDX39A-202ENST00000324340 ARMCX1Q9P291 453 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 TSC22D4Q9Y3Q8 395 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 CCL27Q9Y4X3 112 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 PCDHB11Q9Y5F2 797 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 PTGDR2Q9Y5Y4 395 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 CSNK1G3Q9Y6M4 447 aa12.27□□□□□ -0.45
DDX39A-202ENST00000324340 hCG_2014768A0A024R1R8 64 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 ATP6AP2A0A1C7CYW4 349 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 FAM221BA6H8Z2 402 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 SLC28A1O00337 649 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 FFAR3O14843 346 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 YY2O15391 372 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 GPR42O15529 346 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 KLHL41O60662 606 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 ATP6AP2O75787 350 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 PIAS2O75928 621 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 VIPP01282 170 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 ADSLP30566 484 aaPredicted RBP12.26□□□□□ -0.45
DDX39A-202ENST00000324340 FASLGP48023 281 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 MYBPC1Q00872 1141 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 PRDX1Q06830 199 aaKnown RBP12.26□□□□□ -0.45
DDX39A-202ENST00000324340 LAPTM5Q13571 262 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 GPR18Q14330 331 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 ANGPT1Q15389 498 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 KIF19Q2TAC6 998 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 SMU1Q2TAY7 513 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 CATSPEREQ5SY80 951 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 TMEM53Q6P2H8 277 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 OGFOD3Q6PK18 319 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 IL27RAQ6UWB1 636 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 SLC9B2Q86UD5 537 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 FAM129CQ86XR2 697 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 LAS2Q8IYD9 372 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 MINDY2Q8NBR6 621 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 OR4K1Q8NGD4 311 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 OR2T11Q8NH01 316 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 LMX1AQ8TE12 382 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 CHPT1Q8WUD6 406 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 LCN9Q8WX39 176 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 PATE1Q8WXA2 126 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 PYDC1Q8WXC3 89 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 SH3KBP1Q96B97 665 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 CNDP2Q96KP4 475 aaKnown RBP12.26□□□□□ -0.45
DDX39A-202ENST00000324340 GRIP2Q9C0E4 1043 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 MRGBPQ9NV56 204 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 RIC8BQ9NVN3 520 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 TAC3Q9UHF0 121 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 ZNF490Q9ULM2 529 aaPredicted RBP12.26□□□□□ -0.45
DDX39A-202ENST00000324340 FAM32AQ9Y421 112 aaKnown RBP12.26□□□□□ -0.45
DDX39A-202ENST00000324340 PCDHGA2Q9Y5H1 932 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 PCDHGA11Q9Y5H2 935 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 SNX11Q9Y5W9 270 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 AP4B1Q9Y6B7 739 aa12.26□□□□□ -0.45
DDX39A-202ENST00000324340 TRBV23OR9-2A0A075B6M9 112 aa12.25□□□□□ -0.45
DDX39A-202ENST00000324340 TNFRSF10AO00220 468 aa12.25□□□□□ -0.45
DDX39A-202ENST00000324340 LSM1O15116 133 aaKnown RBP12.25□□□□□ -0.45
DDX39A-202ENST00000324340 PDYNP01213 254 aa12.25□□□□□ -0.45
DDX39A-202ENST00000324340 CHRM5P08912 532 aaPredicted RBP12.25□□□□□ -0.45
DDX39A-202ENST00000324340 HSD3B1P14060 373 aa12.25□□□□□ -0.45
DDX39A-202ENST00000324340 LBPP18428 481 aa12.25□□□□□ -0.45
DDX39A-202ENST00000324340 PRPH2P23942 346 aa12.25□□□□□ -0.45
DDX39A-202ENST00000324340 HSD3B2P26439 372 aa12.25□□□□□ -0.45
DDX39A-202ENST00000324340 PEBP1P30086 187 aaKnown RBP12.25□□□□□ -0.45
DDX39A-202ENST00000324340 CPA2P48052 419 aa12.25□□□□□ -0.45
DDX39A-202ENST00000324340 MRPL19P49406 292 aaKnown RBP12.25□□□□□ -0.45
DDX39A-202ENST00000324340 BCAP31P51572 246 aa12.25□□□□□ -0.45
DDX39A-202ENST00000324340 ABATP80404 500 aa12.25□□□□□ -0.45
DDX39A-202ENST00000324340 TSTA3Q13630 321 aaPredicted RBP12.25□□□□□ -0.45
DDX39A-202ENST00000324340 PAGE2BQ5JRK9 111 aa12.25□□□□□ -0.45
DDX39A-202ENST00000324340 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.25□□□□□ -0.45
DDX39A-202ENST00000324340 FRG2Q64ET8 278 aa12.25□□□□□ -0.45
DDX39A-202ENST00000324340 NXNQ6DKJ4 435 aa12.25□□□□□ -0.45
DDX39A-202ENST00000324340 RABEPKQ7Z6M1 372 aa12.25□□□□□ -0.45
DDX39A-202ENST00000324340 TMPRSS11BQ86T26 416 aa12.25□□□□□ -0.45
DDX39A-202ENST00000324340 C17orf64Q86WR6 236 aa12.25□□□□□ -0.45
DDX39A-202ENST00000324340 SFTPA2Q8IWL1 248 aa12.25□□□□□ -0.45
DDX39A-202ENST00000324340 TRIM48Q8IWZ4 208 aa12.25□□□□□ -0.45
DDX39A-202ENST00000324340 ADGRF3Q8IZF5 1079 aa12.25□□□□□ -0.45
DDX39A-202ENST00000324340 C2orf73Q8N5S3 287 aaPredicted RBP12.25□□□□□ -0.45
DDX39A-202ENST00000324340 OR4E2Q8NGC2 313 aa12.25□□□□□ -0.45
DDX39A-202ENST00000324340 GIPC3Q8TF64 312 aa12.25□□□□□ -0.45
DDX39A-202ENST00000324340 EME1Q96AY2 570 aa12.25□□□□□ -0.45
DDX39A-202ENST00000324340 TUBGCP3Q96CW5 907 aa12.25□□□□□ -0.45
DDX39A-202ENST00000324340 CLPTM1LQ96KA5 538 aa12.25□□□□□ -0.45
DDX39A-202ENST00000324340 FRG2BQ96QU4 278 aa12.25□□□□□ -0.45
DDX39A-202ENST00000324340 ELF4Q99607 663 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms