RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 K7EPI3 171 aa17.79■□□□□ 0.44
CIRBP-201ENST00000320936 RFPL1O75677 317 aa17.79■□□□□ 0.44
CIRBP-201ENST00000320936 KRT15P19012 456 aa17.79■□□□□ 0.44
CIRBP-201ENST00000320936 CCR10P46092 362 aa17.79■□□□□ 0.44
CIRBP-201ENST00000320936 ALDH18A1P54886 795 aaKnown RBP17.79■□□□□ 0.44
CIRBP-201ENST00000320936 FOXL2P58012 376 aa17.79■□□□□ 0.44
CIRBP-201ENST00000320936 IRF8Q02556 426 aa17.79■□□□□ 0.44
CIRBP-201ENST00000320936 OCA2Q04671 838 aa17.79■□□□□ 0.44
CIRBP-201ENST00000320936 IFFO1Q0D2I5 559 aa17.79■□□□□ 0.44
CIRBP-201ENST00000320936 SETDB1Q15047 1291 aa17.79■□□□□ 0.44
CIRBP-201ENST00000320936 SHISA6Q6ZSJ9 500 aa17.79■□□□□ 0.44
CIRBP-201ENST00000320936 COX15Q7KZN9 410 aa17.79■□□□□ 0.44
CIRBP-201ENST00000320936 OVCH1Q7RTY7 1134 aa17.79■□□□□ 0.44
CIRBP-201ENST00000320936 PRSS58Q8IYP2 241 aa17.79■□□□□ 0.44
CIRBP-201ENST00000320936 CNPY4Q8N129 248 aa17.79■□□□□ 0.44
CIRBP-201ENST00000320936 KCT2Q8NC54 265 aa17.79■□□□□ 0.44
CIRBP-201ENST00000320936 EPS8L3Q8TE67 593 aaKnown RBP17.79■□□□□ 0.44
CIRBP-201ENST00000320936 AENQ8WTP8 325 aaKnown RBP17.79■□□□□ 0.44
CIRBP-201ENST00000320936 CCT6BQ92526 530 aa17.79■□□□□ 0.44
CIRBP-201ENST00000320936 MVB12AQ96EY5 273 aa17.79■□□□□ 0.44
CIRBP-201ENST00000320936 PPCSQ9HAB8 311 aa17.79■□□□□ 0.44
CIRBP-201ENST00000320936 ANKHQ9HCJ1 492 aa17.79■□□□□ 0.44
CIRBP-201ENST00000320936 SLC22A11Q9NSA0 550 aa17.79■□□□□ 0.44
CIRBP-201ENST00000320936 GEMIN8Q9NWZ8 242 aaKnown RBP17.79■□□□□ 0.44
CIRBP-201ENST00000320936 TRPC4Q9UBN4 977 aa17.79■□□□□ 0.44
CIRBP-201ENST00000320936 ZFP69BQ9UJL9 534 aa17.79■□□□□ 0.44
CIRBP-201ENST00000320936 MRPS2Q9Y399 296 aaKnown RBP17.79■□□□□ 0.44
CIRBP-201ENST00000320936 EIF4E1BA6NMX2 242 aaKnown RBP17.78■□□□□ 0.44
CIRBP-201ENST00000320936 TK2O00142 265 aa17.78■□□□□ 0.44
CIRBP-201ENST00000320936 MAP2K7O14733 419 aa17.78■□□□□ 0.44
CIRBP-201ENST00000320936 FFAR3O14843 346 aa17.78■□□□□ 0.44
CIRBP-201ENST00000320936 GPR42O15529 346 aa17.78■□□□□ 0.44
CIRBP-201ENST00000320936 MTHFD2P13995 350 aa17.78■□□□□ 0.44
CIRBP-201ENST00000320936 EPB42P16452 691 aa17.78■□□□□ 0.44
CIRBP-201ENST00000320936 IL1RNP18510 177 aa17.78■□□□□ 0.44
CIRBP-201ENST00000320936 AHRP35869 848 aa17.78■□□□□ 0.44
CIRBP-201ENST00000320936 ARL1P40616 181 aaPredicted RBP17.78■□□□□ 0.44
CIRBP-201ENST00000320936 SCTRP47872 440 aa17.78■□□□□ 0.44
CIRBP-201ENST00000320936 DSG2Q14126 1118 aa17.78■□□□□ 0.44
CIRBP-201ENST00000320936 MRPL14Q6P1L8 145 aaKnown RBP17.78■□□□□ 0.44
CIRBP-201ENST00000320936 TMIGD1Q6UXZ0 262 aa17.78■□□□□ 0.44
CIRBP-201ENST00000320936 TIFABQ6ZNK6 161 aa17.78■□□□□ 0.44
CIRBP-201ENST00000320936 MYLK4Q86YV6 388 aaPredicted RBP17.78■□□□□ 0.44
CIRBP-201ENST00000320936 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.78■□□□□ 0.444e-6■■□□□ 12.7
CIRBP-201ENST00000320936 TEX9Q8N6V9 391 aa17.78■□□□□ 0.44
CIRBP-201ENST00000320936 PTGR2Q8N8N7 351 aaPredicted RBP17.78■□□□□ 0.44
CIRBP-201ENST00000320936 OR9A4Q8NGU2 314 aa17.78■□□□□ 0.44
CIRBP-201ENST00000320936 OR2Y1Q8NGV0 311 aa17.78■□□□□ 0.44
CIRBP-201ENST00000320936 TTC9Q92623 222 aa17.78■□□□□ 0.44
CIRBP-201ENST00000320936 TM4SF19Q96DZ7 209 aa17.78■□□□□ 0.44
CIRBP-201ENST00000320936 MOCOSQ96EN8 888 aa17.78■□□□□ 0.44
CIRBP-201ENST00000320936 MRPL57Q9BQC6 102 aaKnown RBP17.78■□□□□ 0.44
CIRBP-201ENST00000320936 PARD6BQ9BYG5 372 aa17.78■□□□□ 0.44
CIRBP-201ENST00000320936 MRPL46Q9H2W6 279 aaKnown RBP17.78■□□□□ 0.44
CIRBP-201ENST00000320936 SOX17Q9H6I2 414 aaPredicted RBP17.78■□□□□ 0.44
CIRBP-201ENST00000320936 WDR54Q9H977 334 aa17.78■□□□□ 0.44
CIRBP-201ENST00000320936 ZNF282Q9UDV7 671 aaPredicted RBP17.78■□□□□ 0.44
CIRBP-201ENST00000320936 NXT1Q9UKK6 140 aaKnown RBP17.78■□□□□ 0.44
CIRBP-201ENST00000320936 TMCO1Q9UM00 188 aa17.78■□□□□ 0.44
CIRBP-201ENST00000320936 CNOT3O75175 753 aaKnown RBP17.77■□□□□ 0.44
CIRBP-201ENST00000320936 KLF7O75840 302 aaPredicted RBP17.77■□□□□ 0.44
CIRBP-201ENST00000320936 RECKO95980 971 aa17.77■□□□□ 0.44
CIRBP-201ENST00000320936 ALBP02768 609 aa17.77■□□□□ 0.44
CIRBP-201ENST00000320936 FAM87AP0C7U9 286 aa17.77■□□□□ 0.44
CIRBP-201ENST00000320936 PYGBP11216 843 aa17.77■□□□□ 0.44
CIRBP-201ENST00000320936 HNF4AP41235 474 aa17.77■□□□□ 0.44
CIRBP-201ENST00000320936 CHIT1Q13231 466 aa17.77■□□□□ 0.44
CIRBP-201ENST00000320936 PWP1Q13610 501 aa17.77■□□□□ 0.44
CIRBP-201ENST00000320936 FAM53BQ14153 422 aa17.77■□□□□ 0.44
CIRBP-201ENST00000320936 DOC2AQ14183 400 aa17.77■□□□□ 0.44
CIRBP-201ENST00000320936 NKG7Q16617 165 aa17.77■□□□□ 0.44
CIRBP-201ENST00000320936 PAGE2BQ5JRK9 111 aa17.77■□□□□ 0.44
CIRBP-201ENST00000320936 TMEM214Q6NUQ4 689 aaKnown RBP17.77■□□□□ 0.44
CIRBP-201ENST00000320936 ANKRD53Q8N9V6 530 aa17.77■□□□□ 0.44
CIRBP-201ENST00000320936 TRPV3Q8NET8 790 aa17.77■□□□□ 0.44
CIRBP-201ENST00000320936 OR2W6PQ8NHA6 318 aa17.77■□□□□ 0.44
CIRBP-201ENST00000320936 APOBEC4Q8WW27 367 aaKnown RBP17.77■□□□□ 0.44
CIRBP-201ENST00000320936 THAP4Q8WY91 577 aa17.77■□□□□ 0.44
CIRBP-201ENST00000320936 MIEF2Q96C03 454 aa17.77■□□□□ 0.44
CIRBP-201ENST00000320936 PHF21BQ96EK2 531 aa17.77■□□□□ 0.44
CIRBP-201ENST00000320936 PTCD3Q96EY7 689 aaKnown RBP17.77■□□□□ 0.44
CIRBP-201ENST00000320936 EFCAB11Q9BUY7 163 aa17.77■□□□□ 0.44
CIRBP-201ENST00000320936 SARGQ9BW04 601 aa17.77■□□□□ 0.44
CIRBP-201ENST00000320936 EHD1Q9H4M9 534 aa17.77■□□□□ 0.44
CIRBP-201ENST00000320936 TNPO3Q9Y5L0 923 aaKnown RBP17.77■□□□□ 0.44
CIRBP-201ENST00000320936 CACNA1GO43497 2377 aa17.77■□□□□ 0.43
CIRBP-201ENST00000320936 TLDC2A0PJX2 215 aa17.76■□□□□ 0.43
CIRBP-201ENST00000320936 LRRC14BA6NHZ5 514 aa17.76■□□□□ 0.43
CIRBP-201ENST00000320936 ATXN7O15265 892 aaPredicted RBP17.76■□□□□ 0.43
CIRBP-201ENST00000320936 ZNF888P0CJ79 500 aaPredicted RBP17.76■□□□□ 0.43
CIRBP-201ENST00000320936 EEF1DP29692 281 aaKnown RBP17.76■□□□□ 0.43
CIRBP-201ENST00000320936 POLE2P56282 527 aa17.76■□□□□ 0.43
CIRBP-201ENST00000320936 LY6DQ14210 128 aa17.76■□□□□ 0.43
CIRBP-201ENST00000320936 HIST2H2ACQ16777 129 aaPredicted RBP17.76■□□□□ 0.43
CIRBP-201ENST00000320936 TOR1AIP1Q5JTV8 583 aa17.76■□□□□ 0.43
CIRBP-201ENST00000320936 HIST2H2AA3Q6FI13 130 aa17.76■□□□□ 0.43
CIRBP-201ENST00000320936 ABHD13Q7L211 337 aa17.76■□□□□ 0.43
CIRBP-201ENST00000320936 PRSS41Q7RTY9 318 aa17.76■□□□□ 0.43
CIRBP-201ENST00000320936 ARHGEF39Q8N4T4 335 aa17.76■□□□□ 0.43
CIRBP-201ENST00000320936 TTLQ8NG68 377 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms