RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 KRT20P35900 424 aa16.78■□□□□ 0.28
COL9A1-201ENST00000320755 CRYBA2P53672 197 aa16.78■□□□□ 0.28
COL9A1-201ENST00000320755 NTHL1P78549 312 aa16.78■□□□□ 0.28
COL9A1-201ENST00000320755 NPRL3Q12980 569 aa16.78■□□□□ 0.28
COL9A1-201ENST00000320755 CLCA4Q14CN2 919 aa16.78■□□□□ 0.28
COL9A1-201ENST00000320755 RGNQ15493 299 aa16.78■□□□□ 0.28
COL9A1-201ENST00000320755 CYP2A13Q16696 494 aa16.78■□□□□ 0.28
COL9A1-201ENST00000320755 RGS21Q2M5E4 152 aa16.78■□□□□ 0.28
COL9A1-201ENST00000320755 KIAA1614Q5VZ46 1190 aa16.78■□□□□ 0.28
COL9A1-201ENST00000320755 ZFP90Q8TF47 636 aa16.78■□□□□ 0.28
COL9A1-201ENST00000320755 BTN2A2Q8WVV5 523 aa16.78■□□□□ 0.28
COL9A1-201ENST00000320755 HHIPQ96QV1 700 aa16.78■□□□□ 0.28
COL9A1-201ENST00000320755 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.78■□□□□ 0.28
COL9A1-201ENST00000320755 SPASTQ9UBP0 616 aa16.78■□□□□ 0.28
COL9A1-201ENST00000320755 SH2B3Q9UQQ2 575 aa16.78■□□□□ 0.28
COL9A1-201ENST00000320755 FKTNO75072 461 aa16.78■□□□□ 0.28
COL9A1-201ENST00000320755 ATG13O75143 517 aa16.78■□□□□ 0.28
COL9A1-201ENST00000320755 ELFN1P0C7U0 828 aa16.78■□□□□ 0.28
COL9A1-201ENST00000320755 ZNF12P17014 697 aa16.78■□□□□ 0.28
COL9A1-201ENST00000320755 NNMTP40261 264 aa16.78■□□□□ 0.28
COL9A1-201ENST00000320755 METAP1P53582 386 aa16.78■□□□□ 0.28
COL9A1-201ENST00000320755 MAD2L1BPQ15013 274 aaPredicted RBP16.78■□□□□ 0.28
COL9A1-201ENST00000320755 ZNF697Q5TEC3 545 aa16.78■□□□□ 0.28
COL9A1-201ENST00000320755 P2RY8Q86VZ1 359 aa16.78■□□□□ 0.28
COL9A1-201ENST00000320755 NPAS3Q8IXF0 933 aa16.78■□□□□ 0.28
COL9A1-201ENST00000320755 SPHK2Q9NRA0 654 aa16.78■□□□□ 0.28
COL9A1-201ENST00000320755 CHD7Q9P2D1 2997 aa16.77■□□□□ 0.28
COL9A1-201ENST00000320755 OBSL1O75147 1896 aa16.77■□□□□ 0.28
COL9A1-201ENST00000320755 LILRB3O75022 631 aa16.77■□□□□ 0.28
COL9A1-201ENST00000320755 POU2F1P14859 743 aa16.77■□□□□ 0.28
COL9A1-201ENST00000320755 CAMK2GQ13555 558 aaPredicted RBP16.77■□□□□ 0.28
COL9A1-201ENST00000320755 ZNF385BQ569K4 471 aa16.77■□□□□ 0.28
COL9A1-201ENST00000320755 CAPN13Q6MZZ7 669 aaPredicted RBP16.77■□□□□ 0.28
COL9A1-201ENST00000320755 ADCK1Q86TW2 530 aa16.77■□□□□ 0.28
COL9A1-201ENST00000320755 CIDECQ96AQ7 238 aaPredicted RBP16.77■□□□□ 0.28
COL9A1-201ENST00000320755 FOPNLQ96NB1 174 aa16.77■□□□□ 0.28
COL9A1-201ENST00000320755 DUSP21Q9H596 190 aa16.77■□□□□ 0.28
COL9A1-201ENST00000320755 GPBP1L1Q9HC44 474 aaPredicted RBP16.77■□□□□ 0.28
COL9A1-201ENST00000320755 TDP1Q9NUW8 608 aa16.77■□□□□ 0.28
COL9A1-201ENST00000320755 ADPRHL2Q9NX46 363 aa16.77■□□□□ 0.28
COL9A1-201ENST00000320755 KCNE2Q9Y6J6 123 aa16.77■□□□□ 0.28
COL9A1-201ENST00000320755 PSIP1O75475 530 aaKnown RBP16.77■□□□□ 0.27
COL9A1-201ENST00000320755 ZNF30P17039 623 aa16.77■□□□□ 0.27
COL9A1-201ENST00000320755 IDSP22304 550 aa16.77■□□□□ 0.27
COL9A1-201ENST00000320755 ITGB8P26012 769 aa16.77■□□□□ 0.27
COL9A1-201ENST00000320755 HNF4AP41235 474 aa16.77■□□□□ 0.27
COL9A1-201ENST00000320755 IDH2P48735 452 aaKnown RBP16.77■□□□□ 0.27
COL9A1-201ENST00000320755 ST13P50502 369 aaKnown RBP16.77■□□□□ 0.27
COL9A1-201ENST00000320755 HENMT1Q5T8I9 393 aaKnown RBP16.77■□□□□ 0.27
COL9A1-201ENST00000320755 ANKRD33Q7Z3H0 272 aa16.77■□□□□ 0.27
COL9A1-201ENST00000320755 TRAPPC5Q8IUR0 188 aa16.77■□□□□ 0.27
COL9A1-201ENST00000320755 SYNPOQ8N3V7 929 aa16.77■□□□□ 0.27
COL9A1-201ENST00000320755 ING5Q8WYH8 240 aa16.77■□□□□ 0.27
COL9A1-201ENST00000320755 GLYATL1Q969I3 302 aa16.77■□□□□ 0.27
COL9A1-201ENST00000320755 CEP44Q9C0F1 390 aa16.77■□□□□ 0.27
COL9A1-201ENST00000320755 NDRG4Q9ULP0 352 aaKnown RBP16.77■□□□□ 0.27
COL9A1-201ENST00000320755 ZNF106Q9H2Y7 1883 aaKnown RBP16.76■□□□□ 0.27
COL9A1-201ENST00000320755 CLDN25C9JDP6 229 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 H3BM21 787 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 PLK4O00444 970 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 CBFA2T3O75081 653 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 JRKO75564 520 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 DGKEP52429 567 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 NUDT6P53370 316 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 HBA1P69905 142 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 GRHL2Q6ISB3 625 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 MSANTD1Q6ZTZ1 278 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 CCDC149Q6ZUS6 474 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 P3H2Q8IVL5 708 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 KLHL23Q8NBE8 558 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 ATL1Q8WXF7 558 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 FEVQ99581 238 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 ZSCAN5AQ9BUG6 496 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 ACAT2Q9BWD1 397 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 NAALAD2Q9Y3Q0 740 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 MAP4K5Q9Y4K4 846 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 UNC80Q8N2C7 3258 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 HIDE1A8MVS5 230 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 M0R129 80 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 PRMT3O60678 531 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 C6orf47O95873 294 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 C21orf33P30042 268 aaPredicted RBP16.76■□□□□ 0.27
COL9A1-201ENST00000320755 HPCAL1P37235 193 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 KCNJ10P78508 379 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 KEAP1Q14145 624 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 TRIM16LQ309B1 348 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 C7orf34Q96L11 122 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 CCM2Q9BSQ5 444 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 ZBP1Q9H171 429 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 DAPK2Q9UIK4 370 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 ERGIC3Q9Y282 383 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 FUOMA2VDF0 154 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 H0YIV9 168 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 M0QX08 132 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 C9P02748 559 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 CTSAP10619 480 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 PRIM2P49643 509 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 WDR5P61964 334 aaKnown RBP16.76■□□□□ 0.27
COL9A1-201ENST00000320755 PLPP4Q5VZY2 271 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 TSPYL5Q86VY4 417 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms