RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 IL1RNP18510 177 aa16.8■□□□□ 0.28
TPM1-203ENST00000317516 XCR1P46094 333 aa16.8■□□□□ 0.28
TPM1-203ENST00000317516 PWP1Q13610 501 aa16.8■□□□□ 0.28
TPM1-203ENST00000317516 ESPL1Q14674 2120 aa16.8■□□□□ 0.28
TPM1-203ENST00000317516 HERC3Q15034 1050 aa16.8■□□□□ 0.28
TPM1-203ENST00000317516 RPUSD3Q6P087 351 aaKnown RBP16.8■□□□□ 0.28
TPM1-203ENST00000317516 MAATS1Q7Z4T9 603 aa16.8■□□□□ 0.28
TPM1-203ENST00000317516 ZC3HC1Q86WB0 502 aaKnown RBP16.8■□□□□ 0.28
TPM1-203ENST00000317516 KCT2Q8NC54 265 aa16.8■□□□□ 0.28
TPM1-203ENST00000317516 OR1N1Q8NGS0 311 aa16.8■□□□□ 0.28
TPM1-203ENST00000317516 BRIX1Q8TDN6 353 aaKnown RBP16.8■□□□□ 0.28
TPM1-203ENST00000317516 PSMF1Q92530 271 aa16.8■□□□□ 0.28
TPM1-203ENST00000317516 HAS2Q92819 552 aa16.8■□□□□ 0.28
TPM1-203ENST00000317516 MACROD1Q9BQ69 325 aa16.8■□□□□ 0.28
TPM1-203ENST00000317516 WDR83Q9BRX9 315 aaKnown RBP16.8■□□□□ 0.28
TPM1-203ENST00000317516 SARGQ9BW04 601 aa16.8■□□□□ 0.28
TPM1-203ENST00000317516 VN1R1Q9GZP7 353 aa16.8■□□□□ 0.28
TPM1-203ENST00000317516 TEKT2Q9UIF3 430 aa16.8■□□□□ 0.28
TPM1-203ENST00000317516 SH2B3Q9UQQ2 575 aa16.8■□□□□ 0.28
TPM1-203ENST00000317516 SNX24Q9Y343 169 aa16.8■□□□□ 0.28
TPM1-203ENST00000317516 USP9XQ93008 2570 aaPredicted RBP16.79■□□□□ 0.28
TPM1-203ENST00000317516 TRAV17A0A0B4J275 112 aa16.79■□□□□ 0.28
TPM1-203ENST00000317516 TRBC2A0A5B9 178 aa16.79■□□□□ 0.28
TPM1-203ENST00000317516 FAM187AA6NFU0 413 aa16.79■□□□□ 0.28
TPM1-203ENST00000317516 E7ESA3 106 aa16.79■□□□□ 0.28
TPM1-203ENST00000317516 SGK494L7N484 410 aa16.79■□□□□ 0.28
TPM1-203ENST00000317516 ZNF37AP17032 561 aaPredicted RBP16.79■□□□□ 0.28
TPM1-203ENST00000317516 AGTR2P50052 363 aa16.79■□□□□ 0.28
TPM1-203ENST00000317516 SLC12A2P55011 1212 aa16.79■□□□□ 0.28
TPM1-203ENST00000317516 CALCOCO2Q13137 446 aa16.79■□□□□ 0.28
TPM1-203ENST00000317516 CBLBQ13191 982 aa16.79■□□□□ 0.28
TPM1-203ENST00000317516 PCOLCEQ15113 449 aa16.79■□□□□ 0.28
TPM1-203ENST00000317516 PRSS41Q7RTY9 318 aa16.79■□□□□ 0.28
TPM1-203ENST00000317516 CPEB2Q7Z5Q1 589 aaKnown RBP16.79■□□□□ 0.28
TPM1-203ENST00000317516 ZBED8Q8IZ13 594 aa16.79■□□□□ 0.28
TPM1-203ENST00000317516 SIRT6Q8N6T7 355 aa16.79■□□□□ 0.28
TPM1-203ENST00000317516 ST6GALNAC3Q8NDV1 305 aa16.79■□□□□ 0.28
TPM1-203ENST00000317516 CATSPER1Q8NEC5 780 aa16.79■□□□□ 0.28
TPM1-203ENST00000317516 ZCCHC10Q8TBK6 192 aa16.79■□□□□ 0.28
TPM1-203ENST00000317516 PYROXD1Q8WU10 500 aa16.79■□□□□ 0.28
TPM1-203ENST00000317516 FAR1Q8WVX9 515 aa16.79■□□□□ 0.28
TPM1-203ENST00000317516 HCN3Q9P1Z3 774 aa16.79■□□□□ 0.28
TPM1-203ENST00000317516 DYRK1BQ9Y463 629 aa16.79■□□□□ 0.28
TPM1-203ENST00000317516 KCNE2Q9Y6J6 123 aa16.79■□□□□ 0.28
TPM1-203ENST00000317516 PRRC2CQ9Y520 2896 aaKnown RBP16.79■□□□□ 0.28
TPM1-203ENST00000317516 USP9YO00507 2555 aaPredicted RBP16.79■□□□□ 0.28
TPM1-203ENST00000317516 FAM95CA0A1B0GW59 222 aa16.78■□□□□ 0.28
TPM1-203ENST00000317516 URADA6NGE7 173 aa16.78■□□□□ 0.28
TPM1-203ENST00000317516 CYSRT1A8MQ03 144 aa16.78■□□□□ 0.28
TPM1-203ENST00000317516 NDUFS4O43181 175 aa16.78■□□□□ 0.28
TPM1-203ENST00000317516 JRKO75564 520 aa16.78■□□□□ 0.28
TPM1-203ENST00000317516 SOX11P35716 441 aa16.78■□□□□ 0.28
TPM1-203ENST00000317516 RPL21P46778 160 aaKnown RBP16.78■□□□□ 0.28
TPM1-203ENST00000317516 HNMTP50135 292 aa16.78■□□□□ 0.28
TPM1-203ENST00000317516 PGGT1BP53609 377 aa16.78■□□□□ 0.28
TPM1-203ENST00000317516 RGS1Q08116 209 aa16.78■□□□□ 0.28
TPM1-203ENST00000317516 ZXDCQ2QGD7 858 aaPredicted RBP16.78■□□□□ 0.28
TPM1-203ENST00000317516 ABHD17BQ5VST6 288 aa16.78■□□□□ 0.28
TPM1-203ENST00000317516 FAM180AQ6UWF9 173 aa16.78■□□□□ 0.28
TPM1-203ENST00000317516 SBSNQ6UWP8 590 aa16.78■□□□□ 0.28
TPM1-203ENST00000317516 SUN3Q8TAQ9 357 aa16.78■□□□□ 0.28
TPM1-203ENST00000317516 GRHL3Q8TE85 626 aa16.78■□□□□ 0.28
TPM1-203ENST00000317516 SLC5A11Q8WWX8 675 aa16.78■□□□□ 0.28
TPM1-203ENST00000317516 CDKL2Q92772 493 aa16.78■□□□□ 0.28
TPM1-203ENST00000317516 IMMP1LQ96LU5 166 aa16.78■□□□□ 0.28
TPM1-203ENST00000317516 OR4K3Q96R72 315 aa16.78■□□□□ 0.28
TPM1-203ENST00000317516 OR1F2PQ96R84 312 aa16.78■□□□□ 0.28
TPM1-203ENST00000317516 STMN3Q9NZ72 180 aa16.78■□□□□ 0.28
TPM1-203ENST00000317516 TXNDC16Q9P2K2 825 aa16.78■□□□□ 0.28
TPM1-203ENST00000317516 ZFP69BQ9UJL9 534 aa16.78■□□□□ 0.28
TPM1-203ENST00000317516 PYCARDQ9ULZ3 195 aa16.78■□□□□ 0.28
TPM1-203ENST00000317516 SLC5A6Q9Y289 635 aa16.78■□□□□ 0.28
TPM1-203ENST00000317516 NTNG1Q9Y2I2 539 aa16.78■□□□□ 0.28
TPM1-203ENST00000317516 NAALAD2Q9Y3Q0 740 aa16.78■□□□□ 0.28
TPM1-203ENST00000317516 PSAT1Q9Y617 370 aa16.78■□□□□ 0.28
TPM1-203ENST00000317516 CNTRLQ7Z7A1 2325 aa16.78■□□□□ 0.28
TPM1-203ENST00000317516 TP73O15350 636 aa16.77■□□□□ 0.28
TPM1-203ENST00000317516 SERPIND1P05546 499 aa16.77■□□□□ 0.28
TPM1-203ENST00000317516 AHRP35869 848 aa16.77■□□□□ 0.28
TPM1-203ENST00000317516 CDKL1Q00532 357 aa16.77■□□□□ 0.28
TPM1-203ENST00000317516 MEF2AQ02078 507 aaPredicted RBP16.77■□□□□ 0.28
TPM1-203ENST00000317516 CATSPEREQ5SY80 951 aa16.77■□□□□ 0.28
TPM1-203ENST00000317516 PLAG1Q6DJT9 500 aa16.77■□□□□ 0.28
TPM1-203ENST00000317516 TMEM207Q6UWW9 146 aa16.77■□□□□ 0.28
TPM1-203ENST00000317516 ABHD13Q7L211 337 aa16.77■□□□□ 0.28
TPM1-203ENST00000317516 THOC6Q86W42 341 aaKnown RBP16.77■□□□□ 0.28
TPM1-203ENST00000317516 BCORP1Q8N888 145 aa16.77■□□□□ 0.28
TPM1-203ENST00000317516 TRPV3Q8NET8 790 aa16.77■□□□□ 0.28
TPM1-203ENST00000317516 NEIL2Q969S2 332 aa16.77■□□□□ 0.28
TPM1-203ENST00000317516 C5orf34Q96MH7 638 aa16.77■□□□□ 0.28
TPM1-203ENST00000317516 EGFL8Q99944 293 aa16.77■□□□□ 0.28
TPM1-203ENST00000317516 AIF1LQ9BQI0 150 aa16.77■□□□□ 0.28
TPM1-203ENST00000317516 ERP44Q9BS26 406 aa16.77■□□□□ 0.28
TPM1-203ENST00000317516 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.77■□□□□ 0.28
TPM1-203ENST00000317516 RHOJQ9H4E5 214 aa16.77■□□□□ 0.28
TPM1-203ENST00000317516 CLK4Q9HAZ1 481 aaKnown RBP16.77■□□□□ 0.28
TPM1-203ENST00000317516 POPDC3Q9HBV1 291 aa16.77■□□□□ 0.28
TPM1-203ENST00000317516 GPAMQ9HCL2 828 aa16.77■□□□□ 0.28
TPM1-203ENST00000317516 PLA2G3Q9NZ20 509 aa16.77■□□□□ 0.28
TPM1-203ENST00000317516 WHRNQ9P202 907 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms