RNA–Protein interactions for RNA: ENST00000317233.8

AFF3-201, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 8,135 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-201ENST00000317233 CTPS2Q9NRF8 586 aa12.83□□□□□ -0.36
AFF3-201ENST00000317233 MAN2C1Q9NTJ4 1040 aa12.83□□□□□ -0.36
AFF3-201ENST00000317233 PAK1IP1Q9NWT1 392 aaPredicted RBP12.83□□□□□ -0.36
AFF3-201ENST00000317233 GTF2IRD1Q9UHL9 959 aa12.83□□□□□ -0.36
AFF3-201ENST00000317233 SCN1AP35498 2009 aa12.83□□□□□ -0.36
AFF3-201ENST00000317233 ABLIM1O14639 778 aa12.83□□□□□ -0.36
AFF3-201ENST00000317233 TP53I11O14683 189 aa12.83□□□□□ -0.36
AFF3-201ENST00000317233 ACOX3O15254 700 aa12.83□□□□□ -0.36
AFF3-201ENST00000317233 F8A1P23610 371 aa12.83□□□□□ -0.36
AFF3-201ENST00000317233 SOX10P56693 466 aa12.83□□□□□ -0.36
AFF3-201ENST00000317233 AUHQ13825 339 aaKnown RBP12.83□□□□□ -0.36
AFF3-201ENST00000317233 NLGN2Q8NFZ4 835 aa12.83□□□□□ -0.36
AFF3-201ENST00000317233 RAB39BQ96DA2 213 aa12.83□□□□□ -0.36
AFF3-201ENST00000317233 SDSLQ96GA7 329 aa12.83□□□□□ -0.36
AFF3-201ENST00000317233 PPA2Q9H2U2 334 aa12.83□□□□□ -0.36
AFF3-201ENST00000317233 CDH10Q9Y6N8 788 aa12.83□□□□□ -0.36
AFF3-201ENST00000317233 SH2D7A6NKC9 451 aaPredicted RBP12.83□□□□□ -0.36
AFF3-201ENST00000317233 ADCYAP1R1P41586 468 aa12.83□□□□□ -0.36
AFF3-201ENST00000317233 GAD2Q05329 585 aa12.83□□□□□ -0.36
AFF3-201ENST00000317233 ANKRD52Q8NB46 1076 aa12.83□□□□□ -0.36
AFF3-201ENST00000317233 FBRSQ9HAH7 460 aa12.83□□□□□ -0.36
AFF3-201ENST00000317233 C1orf196B1AJZ1 125 aa12.83□□□□□ -0.36
AFF3-201ENST00000317233 TSTD3H0UI37 97 aa12.83□□□□□ -0.36
AFF3-201ENST00000317233 LDB2O43679 373 aa12.83□□□□□ -0.36
AFF3-201ENST00000317233 PKDCCQ504Y2 493 aa12.83□□□□□ -0.36
AFF3-201ENST00000317233 C2orf27AQ580R0 203 aa12.83□□□□□ -0.36
AFF3-201ENST00000317233 SMYD5Q6GMV2 418 aa12.83□□□□□ -0.36
AFF3-201ENST00000317233 LINC00471Q8N535 108 aa12.83□□□□□ -0.36
AFF3-201ENST00000317233 TAMM41Q96BW9 452 aa12.83□□□□□ -0.36
AFF3-201ENST00000317233 TCEAL4Q96EI5 215 aa12.83□□□□□ -0.36
AFF3-201ENST00000317233 YIPF4Q9BSR8 244 aa12.83□□□□□ -0.36
AFF3-201ENST00000317233 IFNA17P01571 189 aa12.83□□□□□ -0.36
AFF3-201ENST00000317233 GSTM3P21266 225 aa12.83□□□□□ -0.36
AFF3-201ENST00000317233 GK5Q6ZS86 529 aa12.83□□□□□ -0.36
AFF3-201ENST00000317233 TRIM46Q7Z4K8 759 aa12.83□□□□□ -0.36
AFF3-201ENST00000317233 ACTR6Q9GZN1 396 aa12.83□□□□□ -0.36
AFF3-201ENST00000317233 TLL2Q9Y6L7 1015 aa12.83□□□□□ -0.36
AFF3-201ENST00000317233 SLC1A7O00341 560 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 EML1O00423 815 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 TFPTP0C1Z6 253 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 NSG1P42857 185 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 RSU1Q15404 277 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 BBS12Q6ZW61 710 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 ZNF514Q96K75 400 aaPredicted RBP12.82□□□□□ -0.36
AFF3-201ENST00000317233 NLGN3Q9NZ94 848 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 EPHA6Q9UF33 1036 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 ITSN1Q15811 1721 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 A0A1B0GV50 99 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 TAS2R43P59537 309 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 OTOP2Q7RTS6 562 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 WDR53Q7Z5U6 358 aaPredicted RBP12.82□□□□□ -0.36
AFF3-201ENST00000317233 OR7G2Q8NG99 324 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 NSMAFQ92636 917 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 PTPRTO14522 1441 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 SPTBP11277 2137 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 GLI1P08151 1106 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 PRPS2P11908 318 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 C6P13671 934 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 RBMS1P29558 406 aaKnown RBP12.82□□□□□ -0.36
AFF3-201ENST00000317233 NATD1Q8N6N6 113 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 SLC25A44Q96H78 314 aaPredicted RBP12.82□□□□□ -0.36
AFF3-201ENST00000317233 TGM7Q96PF1 710 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.82□□□□□ -0.36
AFF3-201ENST00000317233 H2BFMP0C1H6 154 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 SLC9A3P48764 834 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 PPATQ06203 517 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 EMID1Q96A84 441 aaPredicted RBP12.82□□□□□ -0.36
AFF3-201ENST00000317233 A0A0G2JN53 185 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 CLDN5O00501 218 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 PLATP00750 562 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 ALDOBP05062 364 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 RIPPLY1Q0D2K3 151 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 CDNFQ49AH0 187 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 GPR153Q6NV75 609 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 RAB2BQ8WUD1 216 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 TMEM203Q969S6 136 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 WACQ9BTA9 647 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 CARS2Q9HA77 564 aaKnown RBP12.82□□□□□ -0.36
AFF3-201ENST00000317233 OR2S2Q9NQN1 319 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 FAM86C1Q9NVL1 165 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 FAM230AA0A1W2PPH8 454 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 M0R233 179 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 ZNF780AO75290 641 aaPredicted RBP12.82□□□□□ -0.36
AFF3-201ENST00000317233 ZNF254O75437 659 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 RPL7P18124 248 aaKnown RBP12.82□□□□□ -0.36
AFF3-201ENST00000317233 VEGFCP49767 419 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 WNT3AP56704 352 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 GLT8D1Q68CQ7 371 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 SH3RF1Q7Z6J0 888 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 ZFYVE16Q7Z3T8 1539 aa12.82□□□□□ -0.36
AFF3-201ENST00000317233 SHANK2Q9UPX8 1470 aa12.81□□□□□ -0.36
AFF3-201ENST00000317233 OR8U9P0C7N5 309 aa12.81□□□□□ -0.36
AFF3-201ENST00000317233 PAX6P26367 422 aa12.81□□□□□ -0.36
AFF3-201ENST00000317233 CAMLGP49069 296 aa12.81□□□□□ -0.36
AFF3-201ENST00000317233 ZNF267Q14586 743 aaPredicted RBP12.81□□□□□ -0.36
AFF3-201ENST00000317233 DEFB115Q30KQ5 88 aa12.81□□□□□ -0.36
AFF3-201ENST00000317233 NCEH1Q6PIU2 408 aa12.81□□□□□ -0.36
AFF3-201ENST00000317233 GEMIN6Q8WXD5 167 aaKnown RBP12.81□□□□□ -0.36
AFF3-201ENST00000317233 SAMD9Q5K651 1589 aa12.81□□□□□ -0.36
AFF3-201ENST00000317233 SEC14L6B5MCN3 397 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms