RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 EID3Q8N140 333 aa7.52□□□□□ -1.21
CNOT4-201ENST00000315544 OR4M1Q8NGD0 313 aa7.52□□□□□ -1.21
CNOT4-201ENST00000315544 DNAJB14Q8TBM8 379 aa7.52□□□□□ -1.21
CNOT4-201ENST00000315544 GGHQ92820 318 aa7.52□□□□□ -1.21
CNOT4-201ENST00000315544 EME1Q96AY2 570 aa7.52□□□□□ -1.21
CNOT4-201ENST00000315544 ZC3HAV1LQ96H79 300 aaKnown RBP7.52□□□□□ -1.21
CNOT4-201ENST00000315544 COX4I2Q96KJ9 171 aa7.52□□□□□ -1.21
CNOT4-201ENST00000315544 DCLRE1CQ96SD1 692 aaKnown RBP7.52□□□□□ -1.21
CNOT4-201ENST00000315544 NIPSNAP1Q9BPW8 284 aa7.52□□□□□ -1.21
CNOT4-201ENST00000315544 FKBP9O95302 570 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 CDK1P06493 297 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 PIRTP0C851 137 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 RPS4Y1P22090 263 aaKnown RBP7.51□□□□□ -1.21
CNOT4-201ENST00000315544 IMPA1P29218 277 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 CD40LGP29965 261 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 NUP107P57740 925 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 ABHD18Q0P651 414 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 ELAVL2Q12926 359 aaKnown RBP7.51□□□□□ -1.21
CNOT4-201ENST00000315544 CFAP157Q5JU67 520 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 GRHL2Q6ISB3 625 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 CERS6Q6ZMG9 384 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 DEFB128Q7Z7B8 93 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 FBXO39Q8N4B4 442 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 TERB1Q8NA31 727 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 OR2A12Q8NGT7 310 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 KLHL6Q8WZ60 621 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 PBXIP1Q96AQ6 731 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 DDOQ99489 341 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 VCX3AQ9NNX9 186 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 NTNG1Q9Y2I2 539 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 PCDHGC4Q9Y5F7 938 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 HEPACAM2A8MVW5 462 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 PRR33A8MZF0 331 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 CXCR6O00574 342 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 TLR5O60602 858 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 FZD7O75084 574 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 ANXA6P08133 673 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 ALPIP09923 528 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 MTHFRP42898 656 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 GDF5P43026 501 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 SNRPGP62308 76 aaKnown RBP7.51□□□□□ -1.21
CNOT4-201ENST00000315544 GRAMD1BQ3KR37 738 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 TIGD2Q4W5G0 525 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 EOGTQ5NDL2 527 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 LRRC66Q68CR7 880 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 LAMTOR1Q6IAA8 161 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 TWF2Q6IBS0 349 aaKnown RBP7.51□□□□□ -1.21
CNOT4-201ENST00000315544 ZCCHC8Q6NZY4 707 aaKnown RBP7.51□□□□□ -1.21
CNOT4-201ENST00000315544 RALGPS2Q86X27 583 aaPredicted RBP7.51□□□□□ -1.21
CNOT4-201ENST00000315544 ABI1Q8IZP0 508 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 EDAQ92838 391 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 PHF7Q9BWX1 381 aaPredicted RBP7.51□□□□□ -1.21
CNOT4-201ENST00000315544 PPP1R3EQ9H7J1 279 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 KLF15Q9UIH9 416 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 ENTPD4Q9Y227 616 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 PCDHB5Q9Y5E4 795 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 SCN2AQ99250 2005 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 TNFRSF10AO00220 468 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 LZTS3O60299 673 aaPredicted RBP7.51□□□□□ -1.21
CNOT4-201ENST00000315544 FURINP09958 794 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 FMO4P31512 558 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 ZXDAP98168 799 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 CDK5Q00535 292 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 PRKG2Q13237 762 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 ZIC1Q15915 447 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 CCDC6Q16204 474 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 ATP13A5Q4VNC0 1218 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 KISS1RQ969F8 398 aaPredicted RBP7.51□□□□□ -1.21
CNOT4-201ENST00000315544 POP5Q969H6 163 aaKnown RBP7.51□□□□□ -1.21
CNOT4-201ENST00000315544 SYTL2Q9HCH5 934 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 ANKHQ9HCJ1 492 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 CD207Q9UJ71 328 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 TDRKHQ9Y2W6 561 aaKnown RBP7.51□□□□□ -1.21
CNOT4-201ENST00000315544 SH3BP1Q9Y3L3 701 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 HCN4Q9Y3Q4 1203 aa7.51□□□□□ -1.21
CNOT4-201ENST00000315544 A0A075B6Q4 140 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 CCDC154A6NI56 674 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.5□□□□□ -1.21
CNOT4-201ENST00000315544 PER2O15055 1255 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 SCAMP2O15127 329 aaKnown RBP7.5□□□□□ -1.21
CNOT4-201ENST00000315544 TGM5O43548 720 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 CCNDBP1O95273 360 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 OR12D1P0DN82 309 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 NPPBP16860 134 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 CTPS1P17812 591 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 CD70P32970 193 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 TRPC1P48995 793 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 PRLHRP49683 370 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 SH3BGRP55822 239 aaPredicted RBP7.5□□□□□ -1.21
CNOT4-201ENST00000315544 ZNF77Q15935 545 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 CSRP2Q16527 193 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 PLEKHG7Q6ZR37 379 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 FRA10AC1Q70Z53 315 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 TRIM69Q86WT6 500 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 SNX29P2Q8IUI4 249 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 MIPOL1Q8TD10 442 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 HLA-CQ95604 372 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 RBM4BQ9BQ04 359 aaKnown RBP7.5□□□□□ -1.21
CNOT4-201ENST00000315544 RBM4Q9BWF3 364 aaKnown RBP7.5□□□□□ -1.21
CNOT4-201ENST00000315544 CEP44Q9C0F1 390 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms