RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 TBC1D3CQ6IPX1 549 aa12.78□□□□□ -0.36
SNED1-201ENST00000310397 FBXL22Q6P050 247 aa12.78□□□□□ -0.36
SNED1-201ENST00000310397 SHQ1Q6PI26 577 aaKnown RBP12.78□□□□□ -0.36
SNED1-201ENST00000310397 TBC1D3Q8IZP1 549 aaPredicted RBP12.78□□□□□ -0.36
SNED1-201ENST00000310397 THAP6Q8TBB0 222 aa12.78□□□□□ -0.36
SNED1-201ENST00000310397 PYCR2Q96C36 320 aa12.78□□□□□ -0.36
SNED1-201ENST00000310397 C5orf34Q96MH7 638 aa12.78□□□□□ -0.36
SNED1-201ENST00000310397 TAS2R10Q9NYW0 307 aa12.78□□□□□ -0.36
SNED1-201ENST00000310397 LOC730098B7Z3J9 87 aa12.78□□□□□ -0.36
SNED1-201ENST00000310397 CXCL14O95715 111 aa12.78□□□□□ -0.36
SNED1-201ENST00000310397 SLC9A3P48764 834 aa12.78□□□□□ -0.36
SNED1-201ENST00000310397 TMCO2Q7Z6W1 182 aaPredicted RBP12.78□□□□□ -0.36
SNED1-201ENST00000310397 C1orf52Q8N6N3 182 aaKnown RBP12.78□□□□□ -0.36
SNED1-201ENST00000310397 OR2L3Q8NG85 312 aa12.78□□□□□ -0.36
SNED1-201ENST00000310397 NFKBIDQ8NI38 313 aa12.78□□□□□ -0.36
SNED1-201ENST00000310397 SLC22A18Q96BI1 424 aa12.78□□□□□ -0.36
SNED1-201ENST00000310397 FUZQ9BT04 418 aa12.78□□□□□ -0.36
SNED1-201ENST00000310397 ACTR6Q9GZN1 396 aa12.78□□□□□ -0.36
SNED1-201ENST00000310397 GNB5O14775 395 aa12.78□□□□□ -0.36
SNED1-201ENST00000310397 CSNK2A2P19784 350 aaPredicted RBP12.78□□□□□ -0.36
SNED1-201ENST00000310397 SP140Q13342 867 aa12.78□□□□□ -0.36
SNED1-201ENST00000310397 PTGR1Q14914 329 aa12.78□□□□□ -0.36
SNED1-201ENST00000310397 FBXO22Q8NEZ5 403 aa12.78□□□□□ -0.36
SNED1-201ENST00000310397 FAM110BQ8TC76 370 aa12.78□□□□□ -0.36
SNED1-201ENST00000310397 BARD1Q99728 777 aaKnown RBP12.78□□□□□ -0.36
SNED1-201ENST00000310397 ANKRD60Q9BZ19 345 aa12.78□□□□□ -0.36
SNED1-201ENST00000310397 SUV39H2Q9H5I1 410 aa12.78□□□□□ -0.36
SNED1-201ENST00000310397 MRPS30Q9NP92 439 aaKnown RBP12.78□□□□□ -0.36
SNED1-201ENST00000310397 UBQLN2Q9UHD9 624 aa12.78□□□□□ -0.36
SNED1-201ENST00000310397 RFPL2O75678 378 aa12.77□□□□□ -0.36
SNED1-201ENST00000310397 TGFB1P01137 390 aa12.77□□□□□ -0.36
SNED1-201ENST00000310397 BMP8BP34820 402 aa12.77□□□□□ -0.36
SNED1-201ENST00000310397 STT3AP46977 705 aa12.77□□□□□ -0.36
SNED1-201ENST00000310397 SIX1Q15475 284 aaPredicted RBP12.77□□□□□ -0.36
SNED1-201ENST00000310397 BMP8AQ7Z5Y6 402 aa12.77□□□□□ -0.36
SNED1-201ENST00000310397 TSPYL5Q86VY4 417 aaPredicted RBP12.77□□□□□ -0.36
SNED1-201ENST00000310397 PM20D2Q8IYS1 436 aa12.77□□□□□ -0.36
SNED1-201ENST00000310397 HS3ST4Q9Y661 456 aa12.77□□□□□ -0.36
SNED1-201ENST00000310397 CAPN5O15484 640 aaPredicted RBP12.77□□□□□ -0.36
SNED1-201ENST00000310397 BCHEP06276 602 aa12.77□□□□□ -0.36
SNED1-201ENST00000310397 LAG3P18627 525 aa12.77□□□□□ -0.36
SNED1-201ENST00000310397 AP2S1P53680 142 aaPredicted RBP12.77□□□□□ -0.36
SNED1-201ENST00000310397 KIAA1324Q6UXG2 1013 aaKnown RBP12.77□□□□□ -0.36
SNED1-201ENST00000310397 LCN9Q8WX39 176 aa12.77□□□□□ -0.36
SNED1-201ENST00000310397 GATA6Q92908 595 aa12.77□□□□□ -0.36
SNED1-201ENST00000310397 SUSD3Q96L08 255 aa12.77□□□□□ -0.36
SNED1-201ENST00000310397 KCNA7Q96RP8 456 aa12.77□□□□□ -0.36
SNED1-201ENST00000310397 TRIB3Q96RU7 358 aa12.77□□□□□ -0.36
SNED1-201ENST00000310397 AIFM2Q9BRQ8 373 aa12.77□□□□□ -0.36
SNED1-201ENST00000310397 H7C2Y5 167 aa12.77□□□□□ -0.37
SNED1-201ENST00000310397 RP2O75695 350 aa12.77□□□□□ -0.37
SNED1-201ENST00000310397 ANXA3P12429 323 aa12.77□□□□□ -0.37
SNED1-201ENST00000310397 UBXN11Q5T124 520 aa12.77□□□□□ -0.37
SNED1-201ENST00000310397 ZNF527Q8NB42 609 aa12.77□□□□□ -0.37
SNED1-201ENST00000310397 M0R233 179 aa12.77□□□□□ -0.37
SNED1-201ENST00000310397 MT-ND5P03915 603 aa12.77□□□□□ -0.37
SNED1-201ENST00000310397 OR3A3P47888 321 aa12.77□□□□□ -0.37
SNED1-201ENST00000310397 OR3A2P47893 321 aa12.77□□□□□ -0.37
SNED1-201ENST00000310397 ZNF763Q0D2J5 394 aa12.77□□□□□ -0.37
SNED1-201ENST00000310397 PRAMEF14Q5SWL7 426 aa12.77□□□□□ -0.37
SNED1-201ENST00000310397 NOL9Q5SY16 702 aaKnown RBP12.77□□□□□ -0.37
SNED1-201ENST00000310397 PRAMEF13Q5VWM6 474 aa12.77□□□□□ -0.37
SNED1-201ENST00000310397 LYSMD3Q7Z3D4 306 aa12.77□□□□□ -0.37
SNED1-201ENST00000310397 GPR135Q8IZ08 494 aa12.77□□□□□ -0.37
SNED1-201ENST00000310397 ZNF676Q8N7Q3 588 aa12.77□□□□□ -0.37
SNED1-201ENST00000310397 TIAM2Q8IVF5 1701 aa12.77□□□□□ -0.37
SNED1-201ENST00000310397 SAP18O00422 153 aaKnown RBP12.77□□□□□ -0.37
SNED1-201ENST00000310397 IVDP26440 423 aa12.77□□□□□ -0.37
SNED1-201ENST00000310397 CD40LGP29965 261 aa12.77□□□□□ -0.37
SNED1-201ENST00000310397 FADDQ13158 208 aa12.77□□□□□ -0.37
SNED1-201ENST00000310397 CLCA4Q14CN2 919 aa12.77□□□□□ -0.37
SNED1-201ENST00000310397 GPR151Q8TDV0 419 aa12.77□□□□□ -0.37
SNED1-201ENST00000310397 RFT1Q96AA3 541 aa12.77□□□□□ -0.37
SNED1-201ENST00000310397 TRPV4Q9HBA0 871 aa12.77□□□□□ -0.37
SNED1-201ENST00000310397 TMEM248Q9NWD8 314 aa12.77□□□□□ -0.37
SNED1-201ENST00000310397 SMOXQ9NWM0 555 aa12.77□□□□□ -0.37
SNED1-201ENST00000310397 CYTH4Q9UIA0 394 aa12.77□□□□□ -0.37
SNED1-201ENST00000310397 WNT9AO14904 365 aa12.77□□□□□ -0.37
SNED1-201ENST00000310397 MRPS14O60783 128 aaKnown RBP12.77□□□□□ -0.37
SNED1-201ENST00000310397 ATP1B2P14415 290 aaPredicted RBP12.77□□□□□ -0.37
SNED1-201ENST00000310397 RYKP34925 604 aa12.77□□□□□ -0.37
SNED1-201ENST00000310397 CLCN7P51798 805 aa12.77□□□□□ -0.37
SNED1-201ENST00000310397 RPS3AP61247 264 aaKnown RBP12.77□□□□□ -0.37
SNED1-201ENST00000310397 NUP54Q7Z3B4 507 aa12.77□□□□□ -0.37
SNED1-201ENST00000310397 GID4Q8IVV7 300 aa12.77□□□□□ -0.37
SNED1-201ENST00000310397 NKD1Q969G9 470 aa12.77□□□□□ -0.37
SNED1-201ENST00000310397 C1orf74Q96LT6 269 aa12.77□□□□□ -0.37
SNED1-201ENST00000310397 NLE1Q9NVX2 485 aaPredicted RBP12.77□□□□□ -0.37
SNED1-201ENST00000310397 RGS17Q9UGC6 210 aaPredicted RBP12.77□□□□□ -0.37
SNED1-201ENST00000310397 PAQR7Q86WK9 346 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 SLC15A3Q8IY34 581 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 ZDHHC14Q8IZN3 488 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 CD93Q9NPY3 652 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 OSER1Q9NX31 292 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 MAGED1Q9Y5V3 778 aaPredicted RBP12.76□□□□□ -0.37
SNED1-201ENST00000310397 SOCS2O14508 198 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 TLX3O43711 291 aaPredicted RBP12.76□□□□□ -0.37
SNED1-201ENST00000310397 PCCBP05166 539 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 KLK1P06870 262 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 CTNNB1P35222 781 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms