RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 DYRK3O43781 588 aa12.25□□□□□ -0.45
RETREG3-201ENST00000309428 PTGER3P43115 390 aa12.25□□□□□ -0.45
RETREG3-201ENST00000309428 RFX3P48380 749 aa12.25□□□□□ -0.45
RETREG3-201ENST00000309428 ST3GAL4Q11206 333 aa12.25□□□□□ -0.45
RETREG3-201ENST00000309428 TIMM50Q3ZCQ8 353 aa12.25□□□□□ -0.45
RETREG3-201ENST00000309428 ELMOD2Q8IZ81 293 aa12.25□□□□□ -0.45
RETREG3-201ENST00000309428 PYURFQ96I23 114 aa12.25□□□□□ -0.45
RETREG3-201ENST00000309428 HSH2DQ96JZ2 352 aa12.25□□□□□ -0.45
RETREG3-201ENST00000309428 CSF3RQ99062 836 aa12.25□□□□□ -0.45
RETREG3-201ENST00000309428 TMEM121BQ9BXQ6 578 aaPredicted RBP12.25□□□□□ -0.45
RETREG3-201ENST00000309428 MRPL9Q9BYD2 267 aaKnown RBP12.25□□□□□ -0.45
RETREG3-201ENST00000309428 BEX1Q9HBH7 125 aa12.25□□□□□ -0.45
RETREG3-201ENST00000309428 ELOVL2Q9NXB9 296 aa12.25□□□□□ -0.45
RETREG3-201ENST00000309428 CRNNQ9UBG3 495 aaPredicted RBP12.25□□□□□ -0.45
RETREG3-201ENST00000309428 INSL5Q9Y5Q6 135 aa12.25□□□□□ -0.45
RETREG3-201ENST00000309428 ZNF701M0R085 212 aaPredicted RBP12.25□□□□□ -0.45
RETREG3-201ENST00000309428 ACOX3O15254 700 aa12.25□□□□□ -0.45
RETREG3-201ENST00000309428 SPTBP11277 2137 aa12.25□□□□□ -0.45
RETREG3-201ENST00000309428 TRIM71Q2Q1W2 868 aaKnown RBP12.25□□□□□ -0.45
RETREG3-201ENST00000309428 CLECL1Q8IZS7 167 aa12.25□□□□□ -0.45
RETREG3-201ENST00000309428 DOK4Q8TEW6 326 aa12.25□□□□□ -0.45
RETREG3-201ENST00000309428 ZNF599Q96NL3 588 aa12.25□□□□□ -0.45
RETREG3-201ENST00000309428 AMBRA1Q9C0C7 1298 aa12.25□□□□□ -0.45
RETREG3-201ENST00000309428 TAS2R9Q9NYW1 312 aa12.25□□□□□ -0.45
RETREG3-201ENST00000309428 IL17CQ9P0M4 197 aa12.25□□□□□ -0.45
RETREG3-201ENST00000309428 FABP12A6NFH5 140 aa12.25□□□□□ -0.45
RETREG3-201ENST00000309428 H3BM21 787 aa12.25□□□□□ -0.45
RETREG3-201ENST00000309428 TLL1O43897 1013 aa12.25□□□□□ -0.45
RETREG3-201ENST00000309428 PAPSS2O95340 614 aaPredicted RBP12.25□□□□□ -0.45
RETREG3-201ENST00000309428 TRBC1P01850 177 aa12.25□□□□□ -0.45
RETREG3-201ENST00000309428 ESR1P03372 595 aa12.25□□□□□ -0.45
RETREG3-201ENST00000309428 EIF2S1P05198 315 aaKnown RBP12.25□□□□□ -0.45
RETREG3-201ENST00000309428 ATF4P18848 351 aaPredicted RBP12.25□□□□□ -0.45
RETREG3-201ENST00000309428 HRH2P25021 359 aa12.25□□□□□ -0.45
RETREG3-201ENST00000309428 HOXC13P31276 330 aa12.25□□□□□ -0.45
RETREG3-201ENST00000309428 ABATP80404 500 aa12.25□□□□□ -0.45
RETREG3-201ENST00000309428 EMX2Q04743 252 aa12.25□□□□□ -0.45
RETREG3-201ENST00000309428 HIST2H2ACQ16777 129 aaPredicted RBP12.25□□□□□ -0.45
RETREG3-201ENST00000309428 HKDC1Q2TB90 917 aa12.25□□□□□ -0.45
RETREG3-201ENST00000309428 C16orf62Q7Z3J2 963 aa12.25□□□□□ -0.45
RETREG3-201ENST00000309428 NELL1Q92832 810 aa12.25□□□□□ -0.45
RETREG3-201ENST00000309428 ZIM2Q9NZV7 527 aa12.25□□□□□ -0.45
RETREG3-201ENST00000309428 PEX16Q9Y5Y5 336 aa12.25□□□□□ -0.45
RETREG3-201ENST00000309428 LYVE1Q9Y5Y7 322 aa12.25□□□□□ -0.45
RETREG3-201ENST00000309428 E2F3O00716 465 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 WBP4O75554 376 aaKnown RBP12.24□□□□□ -0.45
RETREG3-201ENST00000309428 ALDH1A1P00352 501 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 IL6P05231 212 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 HOXB8P17481 243 aaPredicted RBP12.24□□□□□ -0.45
RETREG3-201ENST00000309428 EPHA2P29317 976 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 RCAN2Q14206 197 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 CCSMST1Q4G0I0 132 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 KANK2Q63ZY3 851 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 KAT2AQ92830 837 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 RNF31Q96EP0 1072 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 RNFT2Q96EX2 444 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 RIOK2Q9BVS4 552 aaKnown RBP12.24□□□□□ -0.45
RETREG3-201ENST00000309428 POLR2J2Q9GZM3 115 aaKnown RBP12.24□□□□□ -0.45
RETREG3-201ENST00000309428 IGFLR1Q9H665 355 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 RAD18Q9NS91 495 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 CLN6Q9NWW5 311 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 GPRC5BQ9NZH0 403 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 DNAJC27Q9NZQ0 273 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 TMEM202A6NGA9 273 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 ANKDD1BA6NHY2 528 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 PRR23D1E9PI22 279 aaPredicted RBP12.24□□□□□ -0.45
RETREG3-201ENST00000309428 PDYNP01213 254 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 PRR23D2P0DMB1 279 aaPredicted RBP12.24□□□□□ -0.45
RETREG3-201ENST00000309428 HMGA1P17096 107 aaKnown RBP12.24□□□□□ -0.45
RETREG3-201ENST00000309428 SPAM1P38567 509 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 ZNF33AQ06730 810 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 IL18Q14116 193 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 OXA1LQ15070 435 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 PCBP2Q15366 365 aaKnown RBP eCLIP12.24□□□□□ -0.45
RETREG3-201ENST00000309428 LY6G5CQ5SRR4 150 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 ASB18Q6ZVZ8 466 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 USP43Q70EL4 1123 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 RD3Q7Z3Z2 195 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 ZSWIM9Q86XI8 627 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 KRT73Q86Y46 540 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 TMEM159Q96B96 161 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 ITPKCQ96DU7 683 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 MAELQ96JY0 434 aaKnown RBP12.24□□□□□ -0.45
RETREG3-201ENST00000309428 CEP295NLQ96MC4 621 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 IL17FQ96PD4 163 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 PKP4Q99569 1192 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 MROQ9BYG7 248 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 SPRTNQ9H040 489 aaPredicted RBP12.24□□□□□ -0.45
RETREG3-201ENST00000309428 MIEF1Q9NQG6 463 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 GPSM3Q9Y4H4 160 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 NOX1Q9Y5S8 564 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 HCFC2Q9Y5Z7 792 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 TRIOO75962 3097 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 SBF1O95248 1867 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 DRGXA6NNA5 263 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 CASKO14936 926 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 KIAA0513O60268 411 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 EEDO75530 441 aaKnown RBP12.24□□□□□ -0.45
RETREG3-201ENST00000309428 PDE9AO76083 593 aa12.24□□□□□ -0.45
RETREG3-201ENST00000309428 TGFB1P01137 390 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms