RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 TIGD7Q6NT04 549 aaPredicted RBP4.76□□□□□ -1.65
CKS1B-201ENST00000308987 CES3Q6UWW8 571 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 KANSL1Q7Z3B3 1105 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 DHFR2Q86XF0 187 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 GATAD2AQ86YP4 633 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 CAMK1DQ8IU85 385 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 DENND1CQ8IV53 801 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 METTL25Q8N6Q8 603 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 TRIML2Q8N7C3 387 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 OR2T34Q8NGX1 318 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 OR2T3Q8NH03 318 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 ZNF420Q8TAQ5 688 aaPredicted RBP4.76□□□□□ -1.65
CKS1B-201ENST00000308987 PNPT1Q8TCS8 783 aaKnown RBP4.76□□□□□ -1.65
CKS1B-201ENST00000308987 KCTD4Q8WVF5 259 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 SNX19Q92543 992 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 LPGAT1Q92604 370 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 PEX13Q92968 403 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 EME1Q96AY2 570 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 NMD3Q96D46 503 aaKnown RBP4.76□□□□□ -1.65
CKS1B-201ENST00000308987 L3HYPDHQ96EM0 354 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 RMND5BQ96G75 393 aaPredicted RBP4.76□□□□□ -1.65
CKS1B-201ENST00000308987 FEM1CQ96JP0 617 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 UBXN10Q96LJ8 280 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 CNBD2Q96M20 576 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 PRPF18Q99633 342 aaKnown RBP4.76□□□□□ -1.65
CKS1B-201ENST00000308987 CDC6Q99741 560 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 DPYSL5Q9BPU6 564 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 ULBP1Q9BZM6 244 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 SHCBP1LQ9BZQ2 653 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 SEMA4CQ9C0C4 833 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 NACA2Q9H009 215 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 FBXO44Q9H4M3 255 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 WDCPQ9H6R7 721 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 CAB39LQ9H9S4 337 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 POPDC3Q9HBV1 291 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 PRSS16Q9NQE7 514 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 TREX1Q9NSU2 369 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 CCM2LQ9NUG4 571 aaPredicted RBP4.76□□□□□ -1.65
CKS1B-201ENST00000308987 TMEM9Q9P0T7 183 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 XPR1Q9UBH6 696 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 ABCD2Q9UBJ2 740 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 LSM7Q9UK45 103 aaKnown RBP4.76□□□□□ -1.65
CKS1B-201ENST00000308987 INTS6Q9UL03 887 aaKnown RBP4.76□□□□□ -1.65
CKS1B-201ENST00000308987 RIMKLBQ9ULI2 386 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 NDUFAF1Q9Y375 327 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 RNF11Q9Y3C5 154 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 CEPT1Q9Y6K0 416 aa4.76□□□□□ -1.65
CKS1B-201ENST00000308987 A0A1B0GTQ1 180 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 A0A1B0GVG6 124 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 A0A1W2PR77 199 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 E7ENX8 843 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 FAM72CH0Y354 149 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 PYCARD-AS1I3L0S3 204 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 NEMP1O14524 444 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 MRASO14807 208 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 PHGDHO43175 533 aaKnown RBP4.75□□□□□ -1.65
CKS1B-201ENST00000308987 SLC7A4O43246 635 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 HTRA2O43464 458 aaPredicted RBP4.75□□□□□ -1.65
CKS1B-201ENST00000308987 WISP3O95389 354 aaPredicted RBP4.75□□□□□ -1.65
CKS1B-201ENST00000308987 MATN4O95460 622 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 SEMA4FO95754 770 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 IGLV3-25P01717 112 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 GPIP06744 558 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 LTA4HP09960 611 aaKnown RBP4.75□□□□□ -1.65
CKS1B-201ENST00000308987 ETS2P15036 469 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 FAHP16930 419 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 HOXB6P17509 224 aaKnown RBP4.75□□□□□ -1.65
CKS1B-201ENST00000308987 IL10P22301 178 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 MYF6P23409 242 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 SLC5A2P31639 672 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 CD70P32970 193 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 GRK3P35626 688 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 GRK6P43250 576 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 ABCG1P45844 678 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 METAP1P53582 386 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 ADARP55265 1226 aaKnown RBP4.75□□□□□ -1.65
CKS1B-201ENST00000308987 PKNOX1P55347 436 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 TAS2R39P59534 338 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 STX1BP61266 288 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 ATP6V0D1P61421 351 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 PITX1P78337 314 aaPredicted RBP4.75□□□□□ -1.65
CKS1B-201ENST00000308987 CDKL1Q00532 357 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 SEMG2Q02383 582 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 TARDBPQ13148 414 aaKnown RBP eCLIP4.75□□□□□ -1.65
CKS1B-201ENST00000308987 NME3Q13232 169 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 EIF4EBP2Q13542 120 aaPredicted RBP4.75□□□□□ -1.65
CKS1B-201ENST00000308987 PEX6Q13608 980 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 SPIDRQ14159 915 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 FASTKQ14296 549 aaKnown RBP4.75□□□□□ -1.65
CKS1B-201ENST00000308987 STARD3Q14849 445 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 AGKQ53H12 422 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 NHSL2Q5HYW2 709 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 C6orf52Q5T4I8 152 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 TSTD2Q5T7W7 516 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 FAM72AQ5TYM5 149 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 MANEALQ5VSG8 457 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 IL23RQ5VWK5 629 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 AFMIDQ63HM1 303 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 TMEM198Q66K66 360 aa4.75□□□□□ -1.65
CKS1B-201ENST00000308987 REP15Q6BDI9 236 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms