RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 OR4F3Q6IEY1 312 aa10.36□□□□□ -0.75
SYNPO2-201ENST00000307142 CEACAM20Q6UY09 585 aa10.36□□□□□ -0.75
SYNPO2-201ENST00000307142 TMEM139Q8IV31 216 aa10.36□□□□□ -0.75
SYNPO2-201ENST00000307142 CCDC116Q8IYX3 515 aa10.36□□□□□ -0.75
SYNPO2-201ENST00000307142 ASB15Q8WXK1 588 aa10.36□□□□□ -0.75
SYNPO2-201ENST00000307142 TIGARQ9NQ88 270 aa10.36□□□□□ -0.75
SYNPO2-201ENST00000307142 A8MT66 165 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 IDH3BO43837 385 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 DNAJA2O60884 412 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 P04436 131 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 ALOX12P18054 663 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 TRIM16LQ309B1 348 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 DEFB134Q4QY38 66 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 KIAA0319Q5VV43 1072 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 ZNF433Q8N7K0 673 aaPredicted RBP10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 LPGAT1Q92604 370 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 ZNF689Q96CS4 500 aaPredicted RBP10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 NMD3Q96D46 503 aaKnown RBP10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 TRMT2BQ96GJ1 504 aaKnown RBP10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 CRELD1Q96HD1 420 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 MAP3K3Q99759 626 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 GORASP1Q9BQQ3 440 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 KIFC1Q9BW19 673 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 FAM192AQ9GZU8 254 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 RMI1Q9H9A7 625 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 NKIRAS2Q9NYR9 191 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 DHRS7Q9Y394 339 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 H3BNC9 293 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 EGFP01133 1207 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 HRH2P25021 359 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 DGUOKQ16854 277 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 RAET1LQ5VY80 246 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 GATSQ8NAP1 163 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 OR56A1Q8NGH5 318 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 TRIM43Q96BQ3 446 aaPredicted RBP10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 RNF38Q9H0F5 515 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 SLC35C2Q9NQQ7 365 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 PRODH2Q9UF12 536 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 TMED5Q9Y3A6 229 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 OARD1Q9Y530 152 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 LOXHD1Q8IVV2 1947 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 ABCA3Q99758 1704 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 ADAMDEC1O15204 470 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 SCO2O43819 266 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 PRAMEF12O95522 483 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 BPIP17213 487 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 HOXB6P17509 224 aaKnown RBP10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 EIF1AXP47813 144 aaKnown RBP10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 CLRN1P58418 232 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 SELENOVP59797 346 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 RBBP4Q09028 425 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 DPYSQ14117 519 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 ABHD17BQ5VST6 288 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 DCP2Q8IU60 420 aaKnown RBP10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 ZDHHC14Q8IZN3 488 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 EDAQ92838 391 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 WDR77Q9BQA1 342 aaPredicted RBP10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 PPP4R1LQ9P1A2 415 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 SHOX2O60902 331 aaPredicted RBP10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 AGTR2P50052 363 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 RNF144AP50876 292 aaPredicted RBP10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 MYBPC3Q14896 1274 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 HNRNPA1L2Q32P51 320 aaKnown RBP10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 SPANXN2Q5MJ10 180 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 PROKR2Q8NFJ6 384 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 BORCS6Q96GS4 357 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 TBC1D10AQ9BXI6 508 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 PISDQ9UG56 409 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 KLHL33A6NCF5 533 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 TRIM3O75382 744 aaPredicted RBP10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 MT-ND1P03886 318 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 HNRNPCP07910 306 aaKnown RBP eCLIP10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 ANPEPP15144 967 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 ATF6P18850 670 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 GABRA3P34903 492 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 WNT7BP56706 349 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 SLC7A9P82251 487 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 ACY1Q03154 408 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 FLYWCH1Q4VC44 716 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 CLVS1Q8IUQ0 354 aaPredicted RBP10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 SLC39A1Q9NY26 324 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 RRP8O43159 456 aaKnown RBP10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 C4BPBP20851 252 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 CCT3P49368 545 aaKnown RBP10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 TMED10P49755 219 aaKnown RBP10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 CAPZA1P52907 286 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 CTBP2P56545 445 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 CHAF1BQ13112 559 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 IRF4Q15306 451 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 HORMAD2Q8N7B1 307 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 RFKQ969G6 155 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 RBM4BQ9BQ04 359 aaKnown RBP10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 RBM4Q9BWF3 364 aaKnown RBP10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 PLGRKTQ9HBL7 147 aa10.35□□□□□ -0.75
SYNPO2-201ENST00000307142 UNC5CO95185 931 aa10.34□□□□□ -0.75
SYNPO2-201ENST00000307142 ZNF3P17036 446 aa10.34□□□□□ -0.75
SYNPO2-201ENST00000307142 XKP51811 444 aa10.34□□□□□ -0.75
SYNPO2-201ENST00000307142 MC1RQ01726 317 aa10.34□□□□□ -0.75
SYNPO2-201ENST00000307142 LASP1Q14847 261 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms