RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 SLC45A3Q96JT2 553 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 C10orf90Q96M02 699 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 SMC6Q96SB8 1091 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 GPR87Q9BY21 358 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 FAM117AQ9C073 453 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 SPNS1Q9H2V7 528 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 ACTL8Q9H568 366 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 ACTR8Q9H981 624 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 ANKHQ9HCJ1 492 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 ZNF304Q9HCX3 659 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 ENAMQ9NRM1 1142 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 ARGLU1Q9NWB6 273 aaPredicted RBP10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 TMEM216Q9P0N5 145 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 LGALS13Q9UHV8 139 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 ZFP69BQ9UJL9 534 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 GRID1Q9ULK0 1009 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 FARSAQ9Y285 508 aaKnown RBP10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 ASB1Q9Y576 335 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 PCDHGA6Q9Y5G7 932 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 MRPS18BQ9Y676 258 aaKnown RBP10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 CEP295Q9C0D2 2601 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 CHD8Q9HCK8 2581 aa10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 A8MT66 165 aa10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 E2F3O00716 465 aa10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 LCMT2O60294 686 aaKnown RBP10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 SIX3O95343 332 aaPredicted RBP10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 MYZAPP0CAP1 466 aa10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 PRKAR1AP10644 381 aa10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 MYL2P10916 166 aa10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 ATP5F1P24539 256 aaPredicted RBP10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 FOLR3P41439 243 aa10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 GCGRP47871 477 aa10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 CCNG1P51959 295 aa10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 STXBP1P61764 594 aaKnown RBP10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 NFKB2Q00653 900 aa10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 PWP1Q13610 501 aa10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 FAM53BQ14153 422 aa10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 DOC2AQ14183 400 aa10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 TBCCQ15814 346 aa10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 RBBP7Q16576 425 aa10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 CEP85LQ5SZL2 805 aa10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 NIPAL1Q6NVV3 410 aa10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 MED27Q6P2C8 311 aa10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 C16orf46Q6P387 395 aa10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 ZNF517Q6ZMY9 492 aaPredicted RBP10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 ABHD13Q7L211 337 aa10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 GPR155Q7Z3F1 870 aa10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 GOLGA7Q7Z5G4 137 aa10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 VN1R4Q7Z5H5 301 aa10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 SYVN1Q86TM6 617 aa10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 TRABD2AQ86V40 505 aa10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 ZNF740Q8NDX6 193 aa10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 NT5CQ8TCD5 201 aa10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 CCDC126Q96EE4 140 aa10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 WDR34Q96EX3 536 aa10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 MMABQ96EY8 250 aaPredicted RBP10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 APOPT1Q96IL0 206 aa10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 SEC16BQ96JE7 1060 aa10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 TMEM109Q9BVC6 243 aa10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 YIPF2Q9BWQ6 316 aa10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 CENPHQ9H3R5 247 aa10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 NT5DC2Q9H857 520 aa10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 GEMIN8Q9NWZ8 242 aaKnown RBP10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 SENP1Q9P0U3 644 aa10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 IL17BQ9UHF5 180 aa10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 SSUH2Q9Y2M2 353 aa10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 MAU2Q9Y6X3 613 aa10.47□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 A0A0A6YYC8 382 aaPredicted RBP10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 LRRC14BA6NHZ5 514 aa10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 GOLGA6L10A6NI86 522 aa10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 FOXO6A8MYZ6 492 aa10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 I3L1I5 382 aaPredicted RBP10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 UGDHO60701 494 aa10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 CREG1O75629 220 aa10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 ALBP02768 609 aa10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 RPS17P08708 135 aaKnown RBP10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 PCNAP12004 261 aa10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 IL1RNP18510 177 aa10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 F8A1P23610 371 aa10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 SERPINB1P30740 379 aa10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 CRHR1P34998 444 aa10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 HNF4AP41235 474 aa10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 OR1D4P47884 311 aa10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 RPS18P62269 152 aaKnown RBP10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 OCA2Q04671 838 aa10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 ZNF844Q08AG5 666 aa10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 CDC20Q12834 499 aa10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 HERC3Q15034 1050 aa10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 LIPJQ5W064 366 aa10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 GRHL2Q6ISB3 625 aa10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 LCN10Q6JVE6 187 aa10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 TMEM214Q6NUQ4 689 aaKnown RBP10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 LRIG3Q6UXM1 1119 aa10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 ANKRD53Q8N9V6 530 aa10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 RDH11Q8TC12 318 aa10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 REPS1Q96D71 796 aa10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 TM4SF19Q96DZ7 209 aa10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 CATSPER2Q96P56 530 aa10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 ZIM3Q96PE6 472 aa10.46□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 MACROD1Q9BQ69 325 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms