RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 ADH1AP07327 375 aa12.86□□□□□ -0.35
DDX54-201ENST00000306014 ZNF865P0CJ78 1059 aaPredicted RBP12.86□□□□□ -0.35
DDX54-201ENST00000306014 CD97P48960 835 aa12.86□□□□□ -0.35
DDX54-201ENST00000306014 PPP5CP53041 499 aa12.86□□□□□ -0.35
DDX54-201ENST00000306014 RGS8P57771 180 aaPredicted RBP12.86□□□□□ -0.35
DDX54-201ENST00000306014 TAS2R50P59544 299 aa12.86□□□□□ -0.35
DDX54-201ENST00000306014 CARD16Q5EG05 197 aa12.86□□□□□ -0.35
DDX54-201ENST00000306014 CEACAM20Q6UY09 585 aa12.86□□□□□ -0.35
DDX54-201ENST00000306014 SPRED1Q7Z699 444 aa12.86□□□□□ -0.35
DDX54-201ENST00000306014 RNF130Q86XS8 419 aa12.86□□□□□ -0.35
DDX54-201ENST00000306014 BEND7Q8N7W2 519 aaPredicted RBP12.86□□□□□ -0.35
DDX54-201ENST00000306014 RAD51AP1Q96B01 352 aa12.86□□□□□ -0.35
DDX54-201ENST00000306014 SCLYQ96I15 445 aa12.86□□□□□ -0.35
DDX54-201ENST00000306014 CEP295NLQ96MC4 621 aa12.86□□□□□ -0.35
DDX54-201ENST00000306014 MGME1Q9BQP7 344 aa12.86□□□□□ -0.35
DDX54-201ENST00000306014 SLC22A4Q9H015 551 aa12.86□□□□□ -0.35
DDX54-201ENST00000306014 RIMKLBQ9ULI2 386 aa12.86□□□□□ -0.35
DDX54-201ENST00000306014 IRGMA1A4Y4 181 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 ISM1B1AKI9 464 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 M0QZQ0 153 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 CCL16O15467 120 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 OR1F1O43749 312 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 C1QAP02745 245 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 ITIH1P19827 911 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 CD72P21854 359 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 CCND3P30281 292 aaPredicted RBP12.85□□□□□ -0.35
DDX54-201ENST00000306014 ZNF45Q02386 682 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 PCBP2Q15366 365 aaKnown RBP eCLIP12.85□□□□□ -0.35
DDX54-201ENST00000306014 CLEC12AQ5QGZ9 265 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 C10orf62Q5T681 223 aaPredicted RBP12.85□□□□□ -0.35
DDX54-201ENST00000306014 BICRALQ6AI39 1079 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 TMEM207Q6UWW9 146 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 ZNF366Q8N895 744 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 MAL2Q969L2 176 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 TP53INP1Q96A56 240 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 MRPL48Q96GC5 212 aaKnown RBP12.85□□□□□ -0.35
DDX54-201ENST00000306014 CCDC3Q9BQI4 270 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 ANKHQ9HCJ1 492 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 INTS6Q9UL03 887 aaKnown RBP12.85□□□□□ -0.35
DDX54-201ENST00000306014 A0A1W2PRU2 124 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 H0YC42 278 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 SLC9A3R1O14745 358 aaPredicted RBP12.85□□□□□ -0.35
DDX54-201ENST00000306014 TLX2O43763 284 aaPredicted RBP12.85□□□□□ -0.35
DDX54-201ENST00000306014 CXCL14O95715 111 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 SBK3P0C264 359 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 CKMT1AP12532 417 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 MAPK9P45984 424 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 RGRP47804 291 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 ATP12AP54707 1039 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 ZXDBP98169 803 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 EMX1Q04741 257 aaPredicted RBP12.85□□□□□ -0.35
DDX54-201ENST00000306014 TBC1D25Q3MII6 688 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 CXXC5Q7LFL8 322 aaKnown RBP12.85□□□□□ -0.35
DDX54-201ENST00000306014 TSPYL5Q86VY4 417 aaPredicted RBP12.85□□□□□ -0.35
DDX54-201ENST00000306014 ADAMTS15Q8TE58 950 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 TEX37Q96LM6 180 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 FAM129BQ96TA1 746 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 YIPF4Q9BSR8 244 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 ARHGAP39Q9C0H5 1083 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 ZCCHC3Q9NUD5 404 aaKnown RBP12.85□□□□□ -0.35
DDX54-201ENST00000306014 GPRC5BQ9NZH0 403 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 B4GALT6Q9UBX8 382 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 PDPK1O15530 556 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 RETP07949 1114 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 ACRV1P26436 265 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 PNLIPRP1P54315 467 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 HTRA3P83110 453 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 SHQ1Q6PI26 577 aaKnown RBP12.85□□□□□ -0.35
DDX54-201ENST00000306014 Q6ZVL8 140 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 ZNF296Q8WUU4 475 aaPredicted RBP12.85□□□□□ -0.35
DDX54-201ENST00000306014 RASSF5Q8WWW0 418 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 SLCO4A1Q96BD0 722 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 MAPKAP1Q9BPZ7 522 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 DOHHQ9BU89 302 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 EFCAB11Q9BUY7 163 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 ASPNQ9BXN1 380 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 PRDM8Q9NQV8 689 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 GPR83Q9NYM4 423 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 COL5A3P25940 1745 aaPredicted RBP12.85□□□□□ -0.35
DDX54-201ENST00000306014 OR6C70A6NIJ9 312 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 H1F0P07305 194 aaKnown RBP12.85□□□□□ -0.35
DDX54-201ENST00000306014 TNFRSF1BP20333 461 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 TICAM1Q8IUC6 712 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 FAM20CQ8IXL6 584 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 TCEANCQ8N8B7 351 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 OR8H1Q8NGG4 311 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 UFD1Q92890 307 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 PHOX2BQ99453 314 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 MGLLQ99685 303 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 C3orf14Q9HBI5 128 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 DCAF13Q9NV06 445 aaKnown RBP12.85□□□□□ -0.35
DDX54-201ENST00000306014 SPATA7Q9P0W8 599 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 MAN2B2Q9Y2E5 1009 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 MRPS23Q9Y3D9 190 aaKnown RBP12.85□□□□□ -0.35
DDX54-201ENST00000306014 ZNF780BQ9Y6R6 833 aa12.85□□□□□ -0.35
DDX54-201ENST00000306014 MYO10Q9HD67 2058 aa12.84□□□□□ -0.35
DDX54-201ENST00000306014 MROH6A6NGR9 719 aa12.84□□□□□ -0.35
DDX54-201ENST00000306014 STC2O76061 302 aa12.84□□□□□ -0.35
DDX54-201ENST00000306014 OAZ2O95190 189 aa12.84□□□□□ -0.35
DDX54-201ENST00000306014 GADD45AP24522 165 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms