RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 GPX2P18283 190 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 PIK3CBP42338 1070 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 ASMTP46597 345 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 ABHD18Q0P651 414 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 GAB1Q13480 694 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 LAPTM5Q13571 262 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 HIST2H2ACQ16777 129 aaPredicted RBP6.28□□□□□ -1.4
USP47-201ENST00000305481 FAM98BQ52LJ0 330 aaKnown RBP6.28□□□□□ -1.4
USP47-201ENST00000305481 TMTC4Q5T4D3 741 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 C10orf62Q5T681 223 aaPredicted RBP6.28□□□□□ -1.4
USP47-201ENST00000305481 CPTPQ5TA50 214 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 HIST2H2AA3Q6FI13 130 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 KIAA1161Q6NSJ0 714 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 IYDQ6PHW0 289 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 ZNF621Q6ZSS3 439 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 SERPINA11Q86U17 422 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 HORMAD1Q86X24 394 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 PTOV1Q86YD1 416 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 METTL4Q8N3J2 472 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 TNIP2Q8NFZ5 429 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 OR10Q1Q8NGQ4 319 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 PHF12Q96QT6 1004 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 HAUS8Q9BT25 410 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 TRIT1Q9H3H1 467 aaKnown RBP6.28□□□□□ -1.4
USP47-201ENST00000305481 ZNF576Q9H609 170 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 ACSL5Q9ULC5 683 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 AP3M1Q9Y2T2 418 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 TBC1D3DA0A087WVF3 549 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 TBC1D3IA0A087WXS9 549 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 TBC1D3EA0A087X179 549 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 TBC1D3KA0A087X1G2 549 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 TBC1D3FA6NER0 549 aaPredicted RBP6.28□□□□□ -1.4
USP47-201ENST00000305481 POM121BA6NF01 834 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 SHISA7A6NL88 538 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 TBC1D3LB9A6J9 549 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 SLC31A1O15431 190 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 SERPINA1P01009 418 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 KLK1P06870 262 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 TBC1D3HP0C7X1 549 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 NELFEP18615 380 aaKnown RBP6.28□□□□□ -1.4
USP47-201ENST00000305481 IST1P53990 364 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 ZNF763Q0D2J5 394 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 COL19A1Q14993 1142 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 TBC1D3GQ6DHY5 549 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 TBC1D3CQ6IPX1 549 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 TMEM214Q6NUQ4 689 aaKnown RBP6.28□□□□□ -1.4
USP47-201ENST00000305481 FAM124AQ86V42 546 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 ZZZ3Q8IYH5 903 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 TBC1D3Q8IZP1 549 aaPredicted RBP6.28□□□□□ -1.4
USP47-201ENST00000305481 MMP21Q8N119 569 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 ABHD11Q8NFV4 315 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 PNPT1Q8TCS8 783 aaKnown RBP6.28□□□□□ -1.4
USP47-201ENST00000305481 FAM162AQ96A26 154 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 SCARF2Q96GP6 870 aaPredicted RBP6.28□□□□□ -1.4
USP47-201ENST00000305481 VPS50Q96JG6 964 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 APOOQ9BUR5 198 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 C9orf16Q9BUW7 83 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 ZNF717Q9BY31 904 aaPredicted RBP6.28□□□□□ -1.4
USP47-201ENST00000305481 ANKRD60Q9BZ19 345 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 CHST8Q9H2A9 424 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 OSGEPL1Q9H4B0 414 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 ZNF696Q9H7X3 374 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 FGF22Q9HCT0 170 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 WASH6PQ9NQA3 447 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 AASDHPPTQ9NRN7 309 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 OLAHQ9NV23 265 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 ATP6V1HQ9UI12 483 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 BTNL2Q9UIR0 455 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 IGKV1-8A0A0C4DH67 115 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 RNF103-CHMP3A0A140T963 221 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 FEZF1A0PJY2 475 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 OR52A4PA6NMU1 304 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 H7BY64 318 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 FURINP09958 794 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 FAM58BPP0C7Q3 252 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 C7P10643 843 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 CLDN2P57739 230 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 TFF2Q03403 129 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 CHRNB3Q05901 458 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 PDE7AQ13946 482 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 RBBP5Q15291 538 aaKnown RBP6.28□□□□□ -1.4
USP47-201ENST00000305481 TPRG1LQ5T0D9 272 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 FAM71E1Q6IPT2 247 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 SDE2Q6IQ49 451 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 ZCCHC8Q6NZY4 707 aaKnown RBP6.28□□□□□ -1.4
USP47-201ENST00000305481 TMEM92Q6UXU6 159 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 OR4K1Q8NGD4 311 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 C16orf78Q8WTQ4 265 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 TMBIM1Q969X1 311 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 MRGPRX1Q96LB2 322 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 C12orf66Q96MD2 445 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 PRAP1Q96NZ9 151 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 FERD3LQ96RJ6 166 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 DPH2Q9BQC3 489 aaPredicted RBP6.28□□□□□ -1.4
USP47-201ENST00000305481 TIMM29Q9BSF4 260 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 UGT2B28Q9BY64 529 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 RHBGQ9H310 441 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 XKR8Q9H6D3 395 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 REEP4Q9H6H4 257 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 SCHIP1Q9P0W5 487 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms