RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 POP4O95707 220 aaKnown RBP12.87□□□□□ -0.35
CASC4-201ENST00000299957 FHP07954 510 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 ATP1B2P14415 290 aaPredicted RBP12.87□□□□□ -0.35
CASC4-201ENST00000299957 SSTR4P31391 388 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 TAS2R41P59536 307 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 LMAN2Q12907 356 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 NFE2L1Q14494 772 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 QPRTQ15274 297 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 EXOC3L2Q2M3D2 409 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 IQCCQ4KMZ1 466 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 ERICH5Q6P6B1 374 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 MFSD2AQ8NA29 543 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 SLC43A3Q8NBI5 491 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 REPS1Q96D71 796 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 TRIM45Q9H8W5 580 aaPredicted RBP12.87□□□□□ -0.35
CASC4-201ENST00000299957 ARNT2Q9HBZ2 717 aa12.87□□□□□ -0.35
CASC4-201ENST00000299957 LAMB2P55268 1798 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 AOC2O75106 756 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 DNAJB1P25685 340 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 SLC15A1P46059 708 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 PCDH1Q08174 1060 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 APOFQ13790 326 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 PLEKHG6Q3KR16 790 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 NIPAL1Q6NVV3 410 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 CCBE1Q6UXH8 406 aaPredicted RBP12.86□□□□□ -0.35
CASC4-201ENST00000299957 CEP68Q76N32 757 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 RAB43Q86YS6 212 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 OR10G6Q8NH81 332 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 FCRL4Q96PJ5 515 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 FERD3LQ96RJ6 166 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 ZIC5Q96T25 663 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 TTYH2Q9BSA4 534 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 OR51V1Q9H2C8 321 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 GSTK1Q9Y2Q3 226 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 NRAPQ86VF7 1730 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 FABP12A6NFH5 140 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 MROH6A6NGR9 719 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 CDRT1O95170 752 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 RPLP2P05387 115 aaKnown RBP12.86□□□□□ -0.35
CASC4-201ENST00000299957 MMP2P08253 660 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 CLTBP09497 229 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 PSKH1P11801 424 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 ZNF140P52738 457 aaPredicted RBP12.86□□□□□ -0.35
CASC4-201ENST00000299957 COX10Q12887 443 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.86□□□□□ -0.35
CASC4-201ENST00000299957 IQCHQ86VS3 1027 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 FAM129CQ86XR2 697 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 CHPFQ8IZ52 775 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 OR8J3Q8NGG0 315 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 ZNF671Q8TAW3 534 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 ISL2Q96A47 359 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 RNF31Q96EP0 1072 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 SH3YL1Q96HL8 342 aaPredicted RBP12.86□□□□□ -0.35
CASC4-201ENST00000299957 FAM129BQ96TA1 746 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 ENTPD4Q9Y227 616 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 CLCA3PQ9Y6N3 262 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 E7EQ34 232 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 FAM227AF5H4B4 570 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 TLL1O43897 1013 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 SLC16A8O95907 504 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 PCCBP05166 539 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 PORP16435 677 aaPredicted RBP12.86□□□□□ -0.35
CASC4-201ENST00000299957 SDC1P18827 310 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 GALNT1Q10472 559 aaPredicted RBP12.86□□□□□ -0.35
CASC4-201ENST00000299957 NPAS3Q8IXF0 933 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 IQCF1Q8N6M8 205 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 ZNF675Q8TD23 568 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 SUSD6Q92537 303 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 YTHDF1Q9BYJ9 559 aaKnown RBP12.86□□□□□ -0.35
CASC4-201ENST00000299957 ZCCHC2Q9C0B9 1178 aaKnown RBP12.86□□□□□ -0.35
CASC4-201ENST00000299957 EHD1Q9H4M9 534 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 RNF167Q9H6Y7 350 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 MAT2BQ9NZL9 334 aa12.86□□□□□ -0.35
CASC4-201ENST00000299957 RREB1Q92766 1687 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 NHSL1Q5SYE7 1610 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 M0QZQ0 153 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 FKBP1BP68106 108 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 VLDLRP98155 873 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 CRB2Q5IJ48 1285 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 ATAD3BQ5T9A4 648 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 UBE2UQ5VVX9 321 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 ZNF730Q6ZMV8 503 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 TPRG1Q6ZUI0 275 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 RNF44Q7L0R7 432 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 KRT78Q8N1N4 520 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 LILRA3Q8N6C8 439 aaPredicted RBP12.85□□□□□ -0.35
CASC4-201ENST00000299957 CELF5Q8N6W0 485 aaKnown RBP12.85□□□□□ -0.35
CASC4-201ENST00000299957 ZNF461Q8TAF7 563 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 TRUB1Q8WWH5 349 aaKnown RBP12.85□□□□□ -0.35
CASC4-201ENST00000299957 PIGKQ92643 395 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 RHBDF1Q96CC6 855 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 ZFP3Q96NJ6 502 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 HTATIP2Q9BUP3 242 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 TAC3Q9UHF0 121 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 BOLA1Q9Y3E2 137 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 HAT1O14929 419 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 ZW10O43264 779 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 ALDH3B2P48448 385 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 ATP12AP54707 1039 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 LYPLAL1Q5VWZ2 237 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms