RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 MCFD2Q8NI22 146 aa23.52■■□□□ 1.36
SPTSSA-201ENST00000298130 WDR20Q8TBZ3 569 aa23.52■■□□□ 1.36
SPTSSA-201ENST00000298130 ROGDIQ9GZN7 287 aa23.52■■□□□ 1.36
SPTSSA-201ENST00000298130 EFEMP2O95967 443 aa23.52■■□□□ 1.35
SPTSSA-201ENST00000298130 GADD45AP24522 165 aa23.52■■□□□ 1.35
SPTSSA-201ENST00000298130 HNMTP50135 292 aa23.52■■□□□ 1.35
SPTSSA-201ENST00000298130 ITGA1P56199 1179 aa23.52■■□□□ 1.35
SPTSSA-201ENST00000298130 ZNF385BQ569K4 471 aa23.52■■□□□ 1.35
SPTSSA-201ENST00000298130 METTL2BQ6P1Q9 378 aaKnown RBP23.52■■□□□ 1.35
SPTSSA-201ENST00000298130 SYNPOQ8N3V7 929 aa23.52■■□□□ 1.35
SPTSSA-201ENST00000298130 DACH2Q96NX9 599 aa23.52■■□□□ 1.35
SPTSSA-201ENST00000298130 ZNF229Q9UJW7 825 aa23.52■■□□□ 1.35
SPTSSA-201ENST00000298130 TMEM221A6NGB7 291 aa23.51■■□□□ 1.35
SPTSSA-201ENST00000298130 SGTAO43765 313 aa23.51■■□□□ 1.35
SPTSSA-201ENST00000298130 HSMCR30P0CW71 290 aa23.51■■□□□ 1.35
SPTSSA-201ENST00000298130 TGM1P22735 817 aa23.51■■□□□ 1.35
SPTSSA-201ENST00000298130 MAPK8P45983 427 aa23.51■■□□□ 1.35
SPTSSA-201ENST00000298130 MEF2AQ02078 507 aaPredicted RBP23.51■■□□□ 1.35
SPTSSA-201ENST00000298130 PRSS48Q7RTY5 328 aa23.51■■□□□ 1.35
SPTSSA-201ENST00000298130 TMEM25Q86YD3 366 aa23.51■■□□□ 1.35
SPTSSA-201ENST00000298130 LYSMD1Q96S90 227 aa23.51■■□□□ 1.35
SPTSSA-201ENST00000298130 NIPSNAP1Q9BPW8 284 aa23.51■■□□□ 1.35
SPTSSA-201ENST00000298130 DSN1Q9H410 356 aa23.51■■□□□ 1.35
SPTSSA-201ENST00000298130 MYO7AQ13402 2215 aa23.51■■□□□ 1.35
SPTSSA-201ENST00000298130 M0R082 166 aa23.51■■□□□ 1.35
SPTSSA-201ENST00000298130 TSPAN6O43657 245 aa23.51■■□□□ 1.35
SPTSSA-201ENST00000298130 SLC16A8O95907 504 aa23.51■■□□□ 1.35
SPTSSA-201ENST00000298130 PRPH2P23942 346 aa23.51■■□□□ 1.35
SPTSSA-201ENST00000298130 PDHA2P29803 388 aa23.51■■□□□ 1.35
SPTSSA-201ENST00000298130 WEE1P30291 646 aa23.51■■□□□ 1.35
SPTSSA-201ENST00000298130 CDH12P55289 794 aa23.51■■□□□ 1.35
SPTSSA-201ENST00000298130 RGNQ15493 299 aa23.51■■□□□ 1.35
SPTSSA-201ENST00000298130 AGTRAPQ6RW13 159 aa23.51■■□□□ 1.35
SPTSSA-201ENST00000298130 OR9Q2Q8NGE9 314 aa23.51■■□□□ 1.35
SPTSSA-201ENST00000298130 OR4A15Q8NGL6 344 aa23.51■■□□□ 1.35
SPTSSA-201ENST00000298130 FIBINQ8TAL6 211 aa23.51■■□□□ 1.35
SPTSSA-201ENST00000298130 TRIM39Q9HCM9 518 aa23.51■■□□□ 1.35
SPTSSA-201ENST00000298130 DNAJB5O75953 348 aa23.5■■□□□ 1.35
SPTSSA-201ENST00000298130 SERPINB10P48595 397 aa23.5■■□□□ 1.35
SPTSSA-201ENST00000298130 SFSWAPQ12872 951 aaKnown RBP23.5■■□□□ 1.35
SPTSSA-201ENST00000298130 TP53BP2Q13625 1128 aa23.5■■□□□ 1.35
SPTSSA-201ENST00000298130 PROX2Q3B8N5 592 aa23.5■■□□□ 1.35
SPTSSA-201ENST00000298130 FAHD1Q6P587 224 aa23.5■■□□□ 1.35
SPTSSA-201ENST00000298130 TCAIMQ8N3R3 496 aa23.5■■□□□ 1.35
SPTSSA-201ENST00000298130 HUS1BQ8NHY5 278 aa23.5■■□□□ 1.35
SPTSSA-201ENST00000298130 CIDECQ96AQ7 238 aaPredicted RBP23.5■■□□□ 1.35
SPTSSA-201ENST00000298130 HEPHQ9BQS7 1158 aa23.5■■□□□ 1.35
SPTSSA-201ENST00000298130 RIOK2Q9BVS4 552 aaKnown RBP23.5■■□□□ 1.35
SPTSSA-201ENST00000298130 RHCGQ9UBD6 479 aa23.5■■□□□ 1.35
SPTSSA-201ENST00000298130 IGLV3-16A0A075B6K0 115 aa23.5■■□□□ 1.35
SPTSSA-201ENST00000298130 TNFRSF11BO00300 401 aa23.5■■□□□ 1.35
SPTSSA-201ENST00000298130 SCAMP2O15127 329 aaKnown RBP23.5■■□□□ 1.35
SPTSSA-201ENST00000298130 TBX1O43435 398 aa23.5■■□□□ 1.35
SPTSSA-201ENST00000298130 AIREO43918 545 aa23.5■■□□□ 1.35
SPTSSA-201ENST00000298130 KDM1AO60341 852 aa23.5■■□□□ 1.35
SPTSSA-201ENST00000298130 STSP08842 583 aa23.5■■□□□ 1.35
SPTSSA-201ENST00000298130 HLA-EP13747 358 aa23.5■■□□□ 1.35
SPTSSA-201ENST00000298130 PPP3CCP48454 512 aa23.5■■□□□ 1.35
SPTSSA-201ENST00000298130 RPS13P62277 151 aaKnown RBP23.5■■□□□ 1.35
SPTSSA-201ENST00000298130 MPPE1Q53F39 396 aa23.5■■□□□ 1.35
SPTSSA-201ENST00000298130 ELMOD1Q8N336 334 aa23.5■■□□□ 1.35
SPTSSA-201ENST00000298130 SVOPQ8N4V2 548 aa23.5■■□□□ 1.35
SPTSSA-201ENST00000298130 ECHDC3Q96DC8 303 aa23.5■■□□□ 1.35
SPTSSA-201ENST00000298130 ATAD3AQ9NVI7 634 aa23.5■■□□□ 1.35
SPTSSA-201ENST00000298130 GPATCH2Q9NW75 528 aa23.5■■□□□ 1.35
SPTSSA-201ENST00000298130 CAB39Q9Y376 341 aaPredicted RBP23.5■■□□□ 1.35
SPTSSA-201ENST00000298130 FADS2P1A8MWK0 482 aa23.49■■□□□ 1.35
SPTSSA-201ENST00000298130 NEDD8-MDP1E9PL57 170 aa23.49■■□□□ 1.35
SPTSSA-201ENST00000298130 ARHGEF15O94989 841 aa23.49■■□□□ 1.35
SPTSSA-201ENST00000298130 DNTTP04053 509 aa23.49■■□□□ 1.35
SPTSSA-201ENST00000298130 CXCR4P61073 352 aa23.49■■□□□ 1.35
SPTSSA-201ENST00000298130 GANABQ14697 944 aaKnown RBP23.49■■□□□ 1.35
SPTSSA-201ENST00000298130 TPGS2Q68CL5 300 aa23.49■■□□□ 1.35
SPTSSA-201ENST00000298130 NCCRP1Q6ZVX7 275 aaPredicted RBP23.49■■□□□ 1.35
SPTSSA-201ENST00000298130 OR8J2Q8NGG1 315 aa23.49■■□□□ 1.35
SPTSSA-201ENST00000298130 S100ZQ8WXG8 99 aa23.49■■□□□ 1.35
SPTSSA-201ENST00000298130 MGAT4DA6NG13 374 aa23.49■■□□□ 1.35
SPTSSA-201ENST00000298130 TEX28O15482 410 aa23.49■■□□□ 1.35
SPTSSA-201ENST00000298130 GTF2E2P29084 291 aaKnown RBP23.49■■□□□ 1.35
SPTSSA-201ENST00000298130 TMPRSS11BQ86T26 416 aa23.49■■□□□ 1.35
SPTSSA-201ENST00000298130 FAM9CQ8IZT9 166 aa23.49■■□□□ 1.35
SPTSSA-201ENST00000298130 CYB5D2Q8WUJ1 264 aa23.49■■□□□ 1.35
SPTSSA-201ENST00000298130 NDUFAF4Q9P032 175 aa23.49■■□□□ 1.35
SPTSSA-201ENST00000298130 SH2B3Q9UQQ2 575 aa23.49■■□□□ 1.35
SPTSSA-201ENST00000298130 RUVBL1Q9Y265 456 aaKnown RBP23.49■■□□□ 1.35
SPTSSA-201ENST00000298130 PLXNB3Q9ULL4 1909 aa23.49■■□□□ 1.35
SPTSSA-201ENST00000298130 PRAMEF25A6NGN4 478 aa23.48■■□□□ 1.35
SPTSSA-201ENST00000298130 AQP9O43315 295 aa23.48■■□□□ 1.35
SPTSSA-201ENST00000298130 CSNK1DP48730 415 aa23.48■■□□□ 1.35
SPTSSA-201ENST00000298130 TMED10P49755 219 aaKnown RBP23.48■■□□□ 1.35
SPTSSA-201ENST00000298130 GPR155Q7Z3F1 870 aa23.48■■□□□ 1.35
SPTSSA-201ENST00000298130 MRPS31Q92665 395 aaKnown RBP23.48■■□□□ 1.35
SPTSSA-201ENST00000298130 GTPBP3Q969Y2 492 aaKnown RBP23.48■■□□□ 1.35
SPTSSA-201ENST00000298130 KLHL25Q9H0H3 589 aa23.48■■□□□ 1.35
SPTSSA-201ENST00000298130 OR51E2Q9H255 320 aa23.48■■□□□ 1.35
SPTSSA-201ENST00000298130 FAM83DQ9H4H8 585 aa23.48■■□□□ 1.35
SPTSSA-201ENST00000298130 FBXO8Q9NRD0 319 aa23.48■■□□□ 1.35
SPTSSA-201ENST00000298130 FAM120CQ9NX05 1096 aaKnown RBP23.48■■□□□ 1.35
SPTSSA-201ENST00000298130 STOX2Q9P2F5 926 aaPredicted RBP23.48■■□□□ 1.35
SPTSSA-201ENST00000298130 EXO1Q9UQ84 846 aaKnown RBP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms