RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 SLAMF8Q9P0V8 285 aa14.93□□□□□ -0.02
LSM6-201ENST00000296581 SLCO1B1Q9Y6L6 691 aa14.93□□□□□ -0.02
LSM6-201ENST00000296581 C15orf38-AP3S2A0A0A6YYH1 394 aa14.92□□□□□ -0.02
LSM6-201ENST00000296581 METTL12A8MUP2 240 aa14.92□□□□□ -0.02
LSM6-201ENST00000296581 PWP1Q13610 501 aa14.92□□□□□ -0.02
LSM6-201ENST00000296581 FLOT2Q14254 428 aa14.92□□□□□ -0.02
LSM6-201ENST00000296581 CCDC6Q16204 474 aa14.92□□□□□ -0.02
LSM6-201ENST00000296581 ARPINQ7Z6K5 226 aa14.92□□□□□ -0.02
LSM6-201ENST00000296581 KIAA2013Q8IYS2 634 aa14.92□□□□□ -0.02
LSM6-201ENST00000296581 PHACTR4Q8IZ21 702 aa14.92□□□□□ -0.02
LSM6-201ENST00000296581 FAM156AQ8NDB6 213 aa14.92□□□□□ -0.02
LSM6-201ENST00000296581 CADM4Q8NFZ8 388 aa14.92□□□□□ -0.02
LSM6-201ENST00000296581 SNX19Q92543 992 aa14.92□□□□□ -0.02
LSM6-201ENST00000296581 GTF2H4Q92759 462 aa14.92□□□□□ -0.02
LSM6-201ENST00000296581 KLHDC7BQ96G42 594 aa14.92□□□□□ -0.02
LSM6-201ENST00000296581 EGLN2Q96KS0 407 aa14.92□□□□□ -0.02
LSM6-201ENST00000296581 SLC6A18Q96N87 628 aa14.92□□□□□ -0.02
LSM6-201ENST00000296581 CENPKQ9BS16 269 aa14.92□□□□□ -0.02
LSM6-201ENST00000296581 BCAP29Q9UHQ4 241 aa14.92□□□□□ -0.02
LSM6-201ENST00000296581 NDUFS2O75306 463 aa14.92□□□□□ -0.02
LSM6-201ENST00000296581 HSD17B1P14061 328 aa14.92□□□□□ -0.02
LSM6-201ENST00000296581 PRPS1L1P21108 318 aa14.92□□□□□ -0.02
LSM6-201ENST00000296581 CD27P26842 260 aa14.92□□□□□ -0.02
LSM6-201ENST00000296581 SERPINB1P30740 379 aa14.92□□□□□ -0.02
LSM6-201ENST00000296581 TIA1P31483 386 aaKnown RBP eCLIP14.92□□□□□ -0.02
LSM6-201ENST00000296581 SHMT2P34897 504 aa14.92□□□□□ -0.02
LSM6-201ENST00000296581 MSX2P35548 267 aaPredicted RBP14.92□□□□□ -0.02
LSM6-201ENST00000296581 SLC19A1P41440 591 aa14.92□□□□□ -0.02
LSM6-201ENST00000296581 PXNP49023 591 aaPredicted RBP14.92□□□□□ -0.02
LSM6-201ENST00000296581 HPCAP84074 193 aa14.92□□□□□ -0.02
LSM6-201ENST00000296581 TRAP1Q12931 704 aaKnown RBP14.92□□□□□ -0.02
LSM6-201ENST00000296581 MTAPQ13126 283 aa14.92□□□□□ -0.02
LSM6-201ENST00000296581 TCEA2Q15560 299 aa14.92□□□□□ -0.02
LSM6-201ENST00000296581 SYT12Q8IV01 421 aa14.92□□□□□ -0.02
LSM6-201ENST00000296581 MAFAQ8NHW3 353 aaPredicted RBP14.92□□□□□ -0.02
LSM6-201ENST00000296581 NRG4Q8WWG1 115 aa14.92□□□□□ -0.02
LSM6-201ENST00000296581 TWSG1Q9GZX9 223 aa14.92□□□□□ -0.02
LSM6-201ENST00000296581 S100A14Q9HCY8 104 aa14.92□□□□□ -0.02
LSM6-201ENST00000296581 ARHGEF17Q96PE2 2063 aaPredicted RBP14.91□□□□□ -0.02
LSM6-201ENST00000296581 H7BY64 318 aa14.91□□□□□ -0.02
LSM6-201ENST00000296581 LYNP07948 512 aa14.91□□□□□ -0.02
LSM6-201ENST00000296581 UBTFL6P0CB48 400 aaPredicted RBP14.91□□□□□ -0.02
LSM6-201ENST00000296581 PTX3P26022 381 aaPredicted RBP14.91□□□□□ -0.02
LSM6-201ENST00000296581 PEBP1P30086 187 aaKnown RBP14.91□□□□□ -0.02
LSM6-201ENST00000296581 ERFP50548 548 aa14.91□□□□□ -0.02
LSM6-201ENST00000296581 PHC1P78364 1004 aa14.91□□□□□ -0.02
LSM6-201ENST00000296581 CSNK1G2P78368 415 aa14.91□□□□□ -0.02
LSM6-201ENST00000296581 ABATP80404 500 aa14.91□□□□□ -0.02
LSM6-201ENST00000296581 MAP7Q14244 749 aa14.91□□□□□ -0.02
LSM6-201ENST00000296581 MAPKAPK3Q16644 382 aa14.91□□□□□ -0.02
LSM6-201ENST00000296581 NANOGP8Q6NSW7 305 aa14.91□□□□□ -0.02
LSM6-201ENST00000296581 MSANTD1Q6ZTZ1 278 aa14.91□□□□□ -0.02
LSM6-201ENST00000296581 DCP2Q8IU60 420 aaKnown RBP14.91□□□□□ -0.02
LSM6-201ENST00000296581 CXorf40BQ96DE9 158 aa14.91□□□□□ -0.02
LSM6-201ENST00000296581 PRAP1Q96NZ9 151 aa14.91□□□□□ -0.02
LSM6-201ENST00000296581 GSDMCQ9BYG8 508 aa14.91□□□□□ -0.02
LSM6-201ENST00000296581 TCEAL2Q9H3H9 227 aaPredicted RBP14.91□□□□□ -0.02
LSM6-201ENST00000296581 NANOGQ9H9S0 305 aa14.91□□□□□ -0.02
LSM6-201ENST00000296581 OR6C2Q9NZP2 312 aa14.91□□□□□ -0.02
LSM6-201ENST00000296581 KLF15Q9UIH9 416 aa14.91□□□□□ -0.02
LSM6-201ENST00000296581 NEUROG3Q9Y4Z2 214 aa14.91□□□□□ -0.02
LSM6-201ENST00000296581 IGKV1-8A0A0C4DH67 115 aa14.91□□□□□ -0.02
LSM6-201ENST00000296581 SH3BGRLO75368 114 aa14.91□□□□□ -0.02
LSM6-201ENST00000296581 TGFB1P01137 390 aa14.91□□□□□ -0.02
LSM6-201ENST00000296581 TCN1P20061 433 aaPredicted RBP14.91□□□□□ -0.02
LSM6-201ENST00000296581 S100A3P33764 101 aa14.91□□□□□ -0.02
LSM6-201ENST00000296581 ASMTP46597 345 aa14.91□□□□□ -0.02
LSM6-201ENST00000296581 AP2B1P63010 937 aa14.91□□□□□ -0.02
LSM6-201ENST00000296581 SF1Q15637 639 aaKnown RBP14.91□□□□□ -0.02
LSM6-201ENST00000296581 DPY19L1Q2PZI1 675 aa14.91□□□□□ -0.02
LSM6-201ENST00000296581 C6orf10Q5SRN2 563 aa14.91□□□□□ -0.02
LSM6-201ENST00000296581 IYDQ6PHW0 289 aa14.91□□□□□ -0.02
LSM6-201ENST00000296581 METTL4Q8N3J2 472 aa14.91□□□□□ -0.02
LSM6-201ENST00000296581 ANKRD53Q8N9V6 530 aa14.91□□□□□ -0.02
LSM6-201ENST00000296581 DNAJB14Q8TBM8 379 aa14.91□□□□□ -0.02
LSM6-201ENST00000296581 SLC26A7Q8TE54 656 aa14.91□□□□□ -0.02
LSM6-201ENST00000296581 OR52E6Q96RD3 313 aa14.91□□□□□ -0.02
LSM6-201ENST00000296581 NR1H4Q96RI1 486 aaPredicted RBP14.91□□□□□ -0.02
LSM6-201ENST00000296581 OR51B5Q9H339 312 aa14.91□□□□□ -0.02
LSM6-201ENST00000296581 AASDHPPTQ9NRN7 309 aa14.91□□□□□ -0.02
LSM6-201ENST00000296581 MAN2B2Q9Y2E5 1009 aa14.91□□□□□ -0.02
LSM6-201ENST00000296581 TRIOO75962 3097 aa14.9□□□□□ -0.02
LSM6-201ENST00000296581 KCNH1O95259 989 aa14.9□□□□□ -0.02
LSM6-201ENST00000296581 TBX6O95947 436 aaPredicted RBP14.9□□□□□ -0.02
LSM6-201ENST00000296581 ANXA4P09525 319 aaPredicted RBP14.9□□□□□ -0.02
LSM6-201ENST00000296581 EEFSECP57772 596 aaKnown RBP14.9□□□□□ -0.02
LSM6-201ENST00000296581 SLC34A1Q06495 639 aa14.9□□□□□ -0.02
LSM6-201ENST00000296581 COMMD6Q7Z4G1 85 aa14.9□□□□□ -0.02
LSM6-201ENST00000296581 PARGQ86W56 976 aa14.9□□□□□ -0.02
LSM6-201ENST00000296581 AMIGO1Q86WK6 493 aa14.9□□□□□ -0.02
LSM6-201ENST00000296581 MFSD2AQ8NA29 543 aa14.9□□□□□ -0.02
LSM6-201ENST00000296581 HIPK4Q8NE63 616 aa14.9□□□□□ -0.02
LSM6-201ENST00000296581 GPR156Q8NFN8 814 aa14.9□□□□□ -0.02
LSM6-201ENST00000296581 DNAJB8Q8NHS0 232 aa14.9□□□□□ -0.02
LSM6-201ENST00000296581 ZFPM2Q8WW38 1151 aa14.9□□□□□ -0.02
LSM6-201ENST00000296581 LCN9Q8WX39 176 aa14.9□□□□□ -0.02
LSM6-201ENST00000296581 STARD8Q92502 1023 aa14.9□□□□□ -0.02
LSM6-201ENST00000296581 CGREF1Q99674 301 aa14.9□□□□□ -0.02
LSM6-201ENST00000296581 CAAP1Q9H8G2 361 aa14.9□□□□□ -0.02
LSM6-201ENST00000296581 SPHK1Q9NYA1 384 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms