RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 CADM1Q9BY67 442 aaKnown RBP17.04■□□□□ 0.32
CCDC78-201ENST00000293889 TUBB1Q9H4B7 451 aa17.04■□□□□ 0.32
CCDC78-201ENST00000293889 SYNDIG1Q9H7V2 258 aa17.04■□□□□ 0.32
CCDC78-201ENST00000293889 C1GALT1Q9NS00 363 aa17.04■□□□□ 0.32
CCDC78-201ENST00000293889 FARSBQ9NSD9 589 aaKnown RBP17.04■□□□□ 0.32
CCDC78-201ENST00000293889 ARL8BQ9NVJ2 186 aa17.04■□□□□ 0.32
CCDC78-201ENST00000293889 VTI1BQ9UEU0 232 aa17.04■□□□□ 0.32
CCDC78-201ENST00000293889 KLHL3Q9UH77 587 aa17.04■□□□□ 0.32
CCDC78-201ENST00000293889 SNX6Q9UNH7 406 aa17.04■□□□□ 0.32
CCDC78-201ENST00000293889 BTRCQ9Y297 605 aa17.04■□□□□ 0.32
CCDC78-201ENST00000293889 PCDHGA11Q9Y5H2 935 aa17.04■□□□□ 0.32
CCDC78-201ENST00000293889 MN1Q10571 1320 aaPredicted RBP17.04■□□□□ 0.32
CCDC78-201ENST00000293889 TRBC2A0A5B9 178 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 TLCD2A6NGC4 264 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 SLCO1B7G3V0H7 640 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 HDAC3O15379 428 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 GSC2O15499 205 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 LCMT2O60294 686 aaKnown RBP17.03■□□□□ 0.32
CCDC78-201ENST00000293889 SKAP2O75563 359 aaPredicted RBP17.03■□□□□ 0.32
CCDC78-201ENST00000293889 CPNE6O95741 557 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 KRT6AP02538 564 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 KRT6BP04259 564 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 GP1BAP07359 652 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 CXCR2P25025 360 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 ID4P47928 161 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 KRT6CP48668 564 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 ACADVLP49748 655 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 BTKQ06187 659 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 NAA25Q14CX7 972 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 ABRAXAS2Q15018 415 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 RBBP5Q15291 538 aaKnown RBP17.03■□□□□ 0.32
CCDC78-201ENST00000293889 ADNP2Q6IQ32 1131 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 SCIMPQ6UWF3 145 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 ZNF574Q6ZN55 896 aaPredicted RBP17.03■□□□□ 0.32
CCDC78-201ENST00000293889 LAS2Q8IYD9 372 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 WDR20Q8TBZ3 569 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 UBE2E3Q969T4 207 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 ZNF570Q96NI8 536 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 PITHD1Q9GZP4 211 aaPredicted RBP17.03■□□□□ 0.32
CCDC78-201ENST00000293889 ELOVL6Q9H5J4 265 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 DENND2DQ9H6A0 471 aaPredicted RBP17.03■□□□□ 0.32
CCDC78-201ENST00000293889 DCLRE1BQ9H816 532 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 ANKMY1Q9P2S6 941 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 DCTN4Q9UJW0 460 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 PTGDR2Q9Y5Y4 395 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 IGHV5-51A0A0C4DH38 117 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 PIP5K1BO14986 540 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 OR1F1O43749 312 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 CTSVO60911 334 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 ULK1O75385 1050 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 CHEK2O96017 543 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 PCNAP12004 261 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 ALOX15P16050 662 aaPredicted RBP17.03■□□□□ 0.32
CCDC78-201ENST00000293889 GRK3P35626 688 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 SIM1P81133 766 aaPredicted RBP17.03■□□□□ 0.32
CCDC78-201ENST00000293889 VWA5B1Q5TIE3 1220 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 CACHD1Q5VU97 1274 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 FBXO42Q6P3S6 717 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 TMEM71Q6P5X7 295 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.03■□□□□ 0.32
CCDC78-201ENST00000293889 CHCHD4Q8N4Q1 142 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 C19orf47Q8N9M1 422 aaKnown RBP17.03■□□□□ 0.32
CCDC78-201ENST00000293889 ANKRD53Q8N9V6 530 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 USP7Q93009 1102 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 PPP1R36Q96LQ0 422 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 HBEGFQ99075 208 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 NUF2Q9BZD4 464 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 NT5DC2Q9H857 520 aa17.03■□□□□ 0.32
CCDC78-201ENST00000293889 NKX1-2Q9UD57 310 aaPredicted RBP17.03■□□□□ 0.32
CCDC78-201ENST00000293889 A0A0G2JND7 137 aa17.02■□□□□ 0.31
CCDC78-201ENST00000293889 CAPN14A8MX76 684 aa17.02■□□□□ 0.31
CCDC78-201ENST00000293889 NTN3O00634 580 aaPredicted RBP17.02■□□□□ 0.31
CCDC78-201ENST00000293889 PDYNP01213 254 aa17.02■□□□□ 0.31
CCDC78-201ENST00000293889 LINC00032P0C843 101 aa17.02■□□□□ 0.31
CCDC78-201ENST00000293889 BCL6P41182 706 aa17.02■□□□□ 0.31
CCDC78-201ENST00000293889 AQP5P55064 265 aa17.02■□□□□ 0.31
CCDC78-201ENST00000293889 SNAP47Q5SQN1 464 aa17.02■□□□□ 0.31
CCDC78-201ENST00000293889 SLCO6A1Q86UG4 719 aa17.02■□□□□ 0.31
CCDC78-201ENST00000293889 DDIASQ8IXT1 998 aa17.02■□□□□ 0.31
CCDC78-201ENST00000293889 RNF175Q8N4F7 328 aa17.02■□□□□ 0.31
CCDC78-201ENST00000293889 HUS1BQ8NHY5 278 aa17.02■□□□□ 0.31
CCDC78-201ENST00000293889 SELENOMQ8WWX9 145 aa17.02■□□□□ 0.31
CCDC78-201ENST00000293889 REPS1Q96D71 796 aa17.02■□□□□ 0.31
CCDC78-201ENST00000293889 GFM1Q96RP9 751 aaKnown RBP17.02■□□□□ 0.31
CCDC78-201ENST00000293889 MTERF1Q99551 399 aaKnown RBP17.02■□□□□ 0.31
CCDC78-201ENST00000293889 SARGQ9BW04 601 aa17.02■□□□□ 0.31
CCDC78-201ENST00000293889 SYNPO2LQ9H987 977 aa17.02■□□□□ 0.31
CCDC78-201ENST00000293889 PILRAQ9UKJ1 303 aa17.02■□□□□ 0.31
CCDC78-201ENST00000293889 FCHO1O14526 889 aa17.01■□□□□ 0.31
CCDC78-201ENST00000293889 RAP1GDS1P52306 607 aa17.01■□□□□ 0.31
CCDC78-201ENST00000293889 RELAQ04206 551 aa17.01■□□□□ 0.31
CCDC78-201ENST00000293889 CYP4F3Q08477 520 aa17.01■□□□□ 0.31
CCDC78-201ENST00000293889 DDX39BQ13838 428 aaKnown RBP17.01■□□□□ 0.31
CCDC78-201ENST00000293889 CLPPQ16740 277 aaPredicted RBP17.01■□□□□ 0.31
CCDC78-201ENST00000293889 PRSS42Q7Z5A4 293 aa17.01■□□□□ 0.31
CCDC78-201ENST00000293889 VN1R5Q7Z5H4 357 aa17.01■□□□□ 0.31
CCDC78-201ENST00000293889 CARFQ8N187 725 aa17.01■□□□□ 0.31
CCDC78-201ENST00000293889 OR4D9Q8NGE8 314 aa17.01■□□□□ 0.31
CCDC78-201ENST00000293889 C19orf60Q96EN9 201 aa17.01■□□□□ 0.31
CCDC78-201ENST00000293889 C3orf30Q96M34 536 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms