RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 TXNDC15Q96J42 360 aa12.77□□□□□ -0.37
SLC28A1-201ENST00000286749 SPASTQ9UBP0 616 aa12.77□□□□□ -0.37
SLC28A1-201ENST00000286749 CD84Q9UIB8 345 aa12.77□□□□□ -0.37
SLC28A1-201ENST00000286749 RUVBL1Q9Y265 456 aaKnown RBP12.77□□□□□ -0.37
SLC28A1-201ENST00000286749 PADI2Q9Y2J8 665 aa12.77□□□□□ -0.37
SLC28A1-201ENST00000286749 YIPF1Q9Y548 306 aa12.77□□□□□ -0.37
SLC28A1-201ENST00000286749 C1orf226A1L170 272 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 SCAMP2O15127 329 aaKnown RBP12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 TLL1O43897 1013 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 GREM1O60565 184 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 MTX2O75431 263 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 PCYT1AP49585 367 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 CRISP3P54108 245 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 CYP4F2P78329 520 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 PPIGQ13427 754 aaKnown RBP eCLIP12.76□□□□□ -0.379e-7■■■■■ 27.7
SLC28A1-201ENST00000286749 RGNQ15493 299 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 CPTPQ5TA50 214 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 ADNP2Q6IQ32 1131 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 TPRG1Q6ZUI0 275 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 RNF180Q86T96 592 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 SLC7A5P1Q8MH63 180 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 NAGSQ8N159 534 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 PARP16Q8N5Y8 322 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 ARL14EPQ8N8R7 260 aaPredicted RBP12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 OR10G2Q8NGC3 310 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 SIAEQ9HAT2 523 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 FKBP14Q9NWM8 211 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 QPCTLQ9NXS2 382 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 NDUFAF4Q9P032 175 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 RAPGEFL1Q9UHV5 662 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 TMPRSS11EQ9UL52 423 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 CAB39Q9Y376 341 aaPredicted RBP12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 UGT2A1Q9Y4X1 527 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 IGLV3-16A0A075B6K0 115 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 GABRR3A8MPY1 467 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 E7EQ34 232 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 GFYI3L273 518 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 GFRA2O00451 464 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 PCDH7O60245 1069 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 PTHP01270 115 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 ABCB1P08183 1280 aaPredicted RBP12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 ADORA3P0DMS8 318 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 ALOX12P18054 663 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 S100A5P33763 92 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 PCGF2P35227 344 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 CSNK1DP48730 415 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 STK19P49842 368 aaPredicted RBP12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 HKDC1Q2TB90 917 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 DESI1Q6ICB0 168 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 PNCKQ6P2M8 343 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 ANGPTL8Q6UXH0 198 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 TMEM150AQ86TG1 271 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 HEATR4Q86WZ0 1026 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 NPAS4Q8IUM7 802 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 STX19Q8N4C7 294 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 KBTBD8Q8NFY9 601 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 WDR20Q8TBZ3 569 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 UTP15Q8TED0 518 aaKnown RBP12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 Q96MT0 163 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 LYSMD1Q96S90 227 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 CLSTN3Q9BQT9 956 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 CHCHD6Q9BRQ6 235 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 CENPOQ9BU64 300 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 VN1R3Q9BXE9 311 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 NXF2Q9GZY0 626 aaKnown RBP12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 SPATA6Q9NWH7 488 aaPredicted RBP12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 PCDHGA2Q9Y5H1 932 aa12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 HELZP42694 1942 aaKnown RBP12.76□□□□□ -0.37
SLC28A1-201ENST00000286749 ETHE1O95571 254 aa12.75□□□□□ -0.37
SLC28A1-201ENST00000286749 HSMCR30P0CW71 290 aa12.75□□□□□ -0.37
SLC28A1-201ENST00000286749 MPC1LP0DKB6 136 aa12.75□□□□□ -0.37
SLC28A1-201ENST00000286749 HLA-EP13747 358 aa12.75□□□□□ -0.37
SLC28A1-201ENST00000286749 RCVRNP35243 200 aa12.75□□□□□ -0.37
SLC28A1-201ENST00000286749 OR1E2P47887 323 aa12.75□□□□□ -0.37
SLC28A1-201ENST00000286749 NKX2-5P52952 324 aaPredicted RBP12.75□□□□□ -0.37
SLC28A1-201ENST00000286749 PTPN5P54829 565 aa12.75□□□□□ -0.37
SLC28A1-201ENST00000286749 CDH12P55289 794 aa12.75□□□□□ -0.37
SLC28A1-201ENST00000286749 SPIBQ01892 262 aa12.75□□□□□ -0.37
SLC28A1-201ENST00000286749 LMAN2Q12907 356 aa12.75□□□□□ -0.37
SLC28A1-201ENST00000286749 DOC2AQ14183 400 aa12.75□□□□□ -0.37
SLC28A1-201ENST00000286749 LRIT3Q3SXY7 679 aa12.75□□□□□ -0.37
SLC28A1-201ENST00000286749 DEPDC1Q5TB30 811 aa12.75□□□□□ -0.37
SLC28A1-201ENST00000286749 MLIPQ5VWP3 458 aa12.75□□□□□ -0.37
SLC28A1-201ENST00000286749 LIPJQ5W064 366 aa12.75□□□□□ -0.37
SLC28A1-201ENST00000286749 KIAA1841Q6NSI8 718 aa12.75□□□□□ -0.37
SLC28A1-201ENST00000286749 ZNF605Q86T29 641 aa12.75□□□□□ -0.37
SLC28A1-201ENST00000286749 NPAS3Q8IXF0 933 aa12.75□□□□□ -0.37
SLC28A1-201ENST00000286749 C1orf52Q8N6N3 182 aaKnown RBP12.75□□□□□ -0.37
SLC28A1-201ENST00000286749 OR2AP1Q8NGE2 309 aa12.75□□□□□ -0.37
SLC28A1-201ENST00000286749 SCRN2Q96FV2 425 aa12.75□□□□□ -0.37
SLC28A1-201ENST00000286749 NIPSNAP1Q9BPW8 284 aa12.75□□□□□ -0.37
SLC28A1-201ENST00000286749 SPATA9Q9BWV2 254 aa12.75□□□□□ -0.37
SLC28A1-201ENST00000286749 ITM2CQ9NQX7 267 aa12.75□□□□□ -0.37
SLC28A1-201ENST00000286749 ZNF226Q9NYT6 803 aa12.75□□□□□ -0.37
SLC28A1-201ENST00000286749 OBSL1O75147 1896 aa12.75□□□□□ -0.37
SLC28A1-201ENST00000286749 TMEM88BA6NKF7 163 aa12.75□□□□□ -0.37
SLC28A1-201ENST00000286749 TTC36A6NLP5 189 aa12.75□□□□□ -0.37
SLC28A1-201ENST00000286749 ADAMDEC1O15204 470 aa12.75□□□□□ -0.37
SLC28A1-201ENST00000286749 LATS1O95835 1130 aa12.75□□□□□ -0.37
SLC28A1-201ENST00000286749 DNTTP04053 509 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms