RNA–Protein interactions for RNA: ENST00000286398.11

SMC2-201, Transcript of structural maintenance of chromosomes 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC2, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-201ENST00000286398 PAQR3Q6TCH7 311 aa8.84□□□□□ -0.99
SMC2-201ENST00000286398 LINGO4Q6UY18 593 aa8.84□□□□□ -0.99
SMC2-201ENST00000286398 BEST3Q8N1M1 668 aa8.84□□□□□ -0.99
SMC2-201ENST00000286398 DNAAF1Q8NEP3 725 aa8.84□□□□□ -0.99
SMC2-201ENST00000286398 OR5AK3PQ8NH89 298 aa8.84□□□□□ -0.99
SMC2-201ENST00000286398 COPS5Q92905 334 aa8.84□□□□□ -0.99
SMC2-201ENST00000286398 LPPQ93052 612 aa8.84□□□□□ -0.99
SMC2-201ENST00000286398 P2RX7Q99572 595 aaKnown RBP8.84□□□□□ -0.99
SMC2-201ENST00000286398 HCN4Q9Y3Q4 1203 aa8.84□□□□□ -0.99
SMC2-201ENST00000286398 ENPP3O14638 875 aa8.84□□□□□ -0.99
SMC2-201ENST00000286398 GABRDO14764 452 aa8.84□□□□□ -0.99
SMC2-201ENST00000286398 DFNA5O60443 496 aa8.84□□□□□ -0.99
SMC2-201ENST00000286398 CREBL2O60519 120 aaPredicted RBP8.84□□□□□ -0.99
SMC2-201ENST00000286398 CHRM1P11229 460 aaPredicted RBP8.84□□□□□ -0.99
SMC2-201ENST00000286398 MAP2K4P45985 399 aa8.84□□□□□ -0.99
SMC2-201ENST00000286398 SLC6A9P48067 706 aa8.84□□□□□ -0.99
SMC2-201ENST00000286398 NCBP2P52298 156 aaKnown RBP eCLIP8.84□□□□□ -0.99
SMC2-201ENST00000286398 PPP5CP53041 499 aa8.84□□□□□ -0.99
SMC2-201ENST00000286398 PLEKHN1Q494U1 663 aaPredicted RBP8.84□□□□□ -0.99
SMC2-201ENST00000286398 NOMO2Q5JPE7 1267 aa8.84□□□□□ -0.99
SMC2-201ENST00000286398 CES5AQ6NT32 575 aa8.84□□□□□ -0.99
SMC2-201ENST00000286398 TATDN1Q6P1N9 297 aa8.84□□□□□ -0.99
SMC2-201ENST00000286398 FTMTQ8N4E7 242 aa8.84□□□□□ -0.99
SMC2-201ENST00000286398 DPF1Q92782 380 aa8.84□□□□□ -0.99
SMC2-201ENST00000286398 ZUFSPQ96AP4 578 aa8.84□□□□□ -0.99
SMC2-201ENST00000286398 HEPHQ9BQS7 1158 aa8.84□□□□□ -0.99
SMC2-201ENST00000286398 TGIF2Q9GZN2 237 aa8.84□□□□□ -0.99
SMC2-201ENST00000286398 MYNNQ9NPC7 610 aa8.84□□□□□ -0.99
SMC2-201ENST00000286398 RPS10P5Q9NQ39 176 aa8.84□□□□□ -0.99
SMC2-201ENST00000286398 ERVK13-1Q9NX77 482 aa8.84□□□□□ -0.99
SMC2-201ENST00000286398 ZFR2Q9UPR6 939 aaKnown RBP8.84□□□□□ -0.99
SMC2-201ENST00000286398 MAGED1Q9Y5V3 778 aaPredicted RBP8.84□□□□□ -0.99
SMC2-201ENST00000286398 H3BSH0 61 aa8.83□□□□□ -1
SMC2-201ENST00000286398 INSIG1O15503 277 aa8.83□□□□□ -1
SMC2-201ENST00000286398 STBD1O95210 358 aa8.83□□□□□ -1
SMC2-201ENST00000286398 GKN3PP0CG01 181 aa8.83□□□□□ -1
SMC2-201ENST00000286398 CAPN3P20807 821 aa8.83□□□□□ -1
SMC2-201ENST00000286398 BRCC3P46736 316 aa8.83□□□□□ -1
SMC2-201ENST00000286398 AFF3P51826 1226 aaKnown RBP8.83□□□□□ -1
SMC2-201ENST00000286398 UFM1P61960 85 aa8.83□□□□□ -1
SMC2-201ENST00000286398 C9orf57Q5W0N0 161 aa8.83□□□□□ -1
SMC2-201ENST00000286398 HSDL2Q6YN16 418 aa8.83□□□□□ -1
SMC2-201ENST00000286398 ZFPM1Q8IX07 1006 aa8.83□□□□□ -1
SMC2-201ENST00000286398 KCT2Q8NC54 265 aa8.83□□□□□ -1
SMC2-201ENST00000286398 SLC25A36Q96CQ1 311 aa8.83□□□□□ -1
SMC2-201ENST00000286398 TCEAL7Q9BRU2 100 aa8.83□□□□□ -1
SMC2-201ENST00000286398 POTEKPQ9BYX7 375 aa8.83□□□□□ -1
SMC2-201ENST00000286398 SLC5A7Q9GZV3 580 aa8.83□□□□□ -1
SMC2-201ENST00000286398 MS4A12Q9NXJ0 267 aa8.83□□□□□ -1
SMC2-201ENST00000286398 EXOSC1Q9Y3B2 195 aaKnown RBP8.83□□□□□ -1
SMC2-201ENST00000286398 TEX13CA0A0J9YWL9 993 aa8.83□□□□□ -1
SMC2-201ENST00000286398 A0A1B0GVM2 712 aa8.83□□□□□ -1
SMC2-201ENST00000286398 CXorf49A8MYA2 514 aaPredicted RBP8.83□□□□□ -1
SMC2-201ENST00000286398 SAP18O00422 153 aaKnown RBP8.83□□□□□ -1
SMC2-201ENST00000286398 C4BPAP04003 597 aaKnown RBP8.83□□□□□ -1
SMC2-201ENST00000286398 ITGB5P18084 799 aa8.83□□□□□ -1
SMC2-201ENST00000286398 ALAS2P22557 587 aa8.83□□□□□ -1
SMC2-201ENST00000286398 IL12BP29460 328 aa8.83□□□□□ -1
SMC2-201ENST00000286398 MPIP34949 423 aa8.83□□□□□ -1
SMC2-201ENST00000286398 NSG1P42857 185 aa8.83□□□□□ -1
SMC2-201ENST00000286398 PRKXP51817 358 aa8.83□□□□□ -1
SMC2-201ENST00000286398 RNF4P78317 190 aa8.83□□□□□ -1
SMC2-201ENST00000286398 PIGFQ07326 219 aa8.83□□□□□ -1
SMC2-201ENST00000286398 ANKRD54Q6NXT1 300 aa8.83□□□□□ -1
SMC2-201ENST00000286398 ZNF367Q7RTV3 350 aa8.83□□□□□ -1
SMC2-201ENST00000286398 METTL21AQ8WXB1 218 aa8.83□□□□□ -1
SMC2-201ENST00000286398 SMARCD2Q92925 531 aa8.83□□□□□ -1
SMC2-201ENST00000286398 NECAB3Q96P71 396 aaPredicted RBP8.83□□□□□ -1
SMC2-201ENST00000286398 SPATA9Q9BWV2 254 aa8.83□□□□□ -1
SMC2-201ENST00000286398 CACNG6Q9BXT2 260 aa8.83□□□□□ -1
SMC2-201ENST00000286398 SOX17Q9H6I2 414 aaPredicted RBP8.83□□□□□ -1
SMC2-201ENST00000286398 GALPQ9UBC7 116 aa8.83□□□□□ -1
SMC2-201ENST00000286398 TBC1D3DA0A087WVF3 549 aa8.83□□□□□ -1
SMC2-201ENST00000286398 TBC1D3IA0A087WXS9 549 aa8.83□□□□□ -1
SMC2-201ENST00000286398 TBC1D3EA0A087X179 549 aa8.83□□□□□ -1
SMC2-201ENST00000286398 TBC1D3KA0A087X1G2 549 aa8.83□□□□□ -1
SMC2-201ENST00000286398 OR6C74A6NCV1 312 aa8.83□□□□□ -1
SMC2-201ENST00000286398 TBC1D3FA6NER0 549 aaPredicted RBP8.83□□□□□ -1
SMC2-201ENST00000286398 TBC1D3LB9A6J9 549 aa8.83□□□□□ -1
SMC2-201ENST00000286398 BCHEP06276 602 aa8.83□□□□□ -1
SMC2-201ENST00000286398 GJB1P08034 283 aa8.83□□□□□ -1
SMC2-201ENST00000286398 HOXC6P09630 235 aa8.83□□□□□ -1
SMC2-201ENST00000286398 TBC1D3HP0C7X1 549 aa8.83□□□□□ -1
SMC2-201ENST00000286398 CHRNA4P43681 627 aa8.83□□□□□ -1
SMC2-201ENST00000286398 CAPZA1P52907 286 aa8.83□□□□□ -1
SMC2-201ENST00000286398 HTRA4P83105 476 aaPredicted RBP8.83□□□□□ -1
SMC2-201ENST00000286398 NFATC4Q14934 902 aa8.83□□□□□ -1
SMC2-201ENST00000286398 GPR68Q15743 365 aa8.83□□□□□ -1
SMC2-201ENST00000286398 NTRK2Q16620 822 aa8.83□□□□□ -1
SMC2-201ENST00000286398 ODF4Q2M2E3 257 aa8.83□□□□□ -1
SMC2-201ENST00000286398 LIPKQ5VXJ0 399 aa8.83□□□□□ -1
SMC2-201ENST00000286398 TBC1D3GQ6DHY5 549 aa8.83□□□□□ -1
SMC2-201ENST00000286398 TBC1D3CQ6IPX1 549 aa8.83□□□□□ -1
SMC2-201ENST00000286398 SSX9Q7RTT3 188 aa8.83□□□□□ -1
SMC2-201ENST00000286398 TBC1D3Q8IZP1 549 aaPredicted RBP8.83□□□□□ -1
SMC2-201ENST00000286398 OR7D4Q8NG98 312 aa8.83□□□□□ -1
SMC2-201ENST00000286398 TERB2Q8NHR7 220 aa8.83□□□□□ -1
SMC2-201ENST00000286398 SLC35B2Q8TB61 432 aa8.83□□□□□ -1
SMC2-201ENST00000286398 GRHL3Q8TE85 626 aa8.83□□□□□ -1
SMC2-201ENST00000286398 THEM6Q8WUY1 208 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms