RNA–Protein interactions for RNA: ENST00000283290.9

ATG3-201, Transcript of autophagy related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-201ENST00000283290 CCDC153Q494R4 210 aa16.6■□□□□ 0.25
ATG3-201ENST00000283290 C6orf15Q6UXA7 325 aaPredicted RBP16.6■□□□□ 0.25
ATG3-201ENST00000283290 HDXQ7Z353 690 aa16.6■□□□□ 0.25
ATG3-201ENST00000283290 CACNA2D3Q8IZS8 1091 aa16.6■□□□□ 0.25
ATG3-201ENST00000283290 MFSD9Q8NBP5 474 aa16.6■□□□□ 0.25
ATG3-201ENST00000283290 ZNF483Q8TF39 744 aaPredicted RBP16.6■□□□□ 0.25
ATG3-201ENST00000283290 CCT6BQ92526 530 aa16.6■□□□□ 0.25
ATG3-201ENST00000283290 ATP6V1E2Q96A05 226 aa16.6■□□□□ 0.25
ATG3-201ENST00000283290 ZNF285Q96NJ3 590 aa16.6■□□□□ 0.25
ATG3-201ENST00000283290 NDC1Q9BTX1 674 aa16.6■□□□□ 0.25
ATG3-201ENST00000283290 ERVK-6Q9BXR3 956 aa16.6■□□□□ 0.25
ATG3-201ENST00000283290 KLHL31Q9H511 634 aa16.6■□□□□ 0.25
ATG3-201ENST00000283290 ACTR8Q9H981 624 aa16.6■□□□□ 0.25
ATG3-201ENST00000283290 CUTCQ9NTM9 273 aa16.6■□□□□ 0.25
ATG3-201ENST00000283290 MKS1Q9NXB0 559 aa16.6■□□□□ 0.25
ATG3-201ENST00000283290 GPRC5BQ9NZH0 403 aa16.6■□□□□ 0.25
ATG3-201ENST00000283290 SSUH2Q9Y2M2 353 aa16.6■□□□□ 0.25
ATG3-201ENST00000283290 TNPO3Q9Y5L0 923 aaKnown RBP16.6■□□□□ 0.25
ATG3-201ENST00000283290 LOC101059948A0A1B0GTJ6 334 aa16.59■□□□□ 0.25
ATG3-201ENST00000283290 WDR91A4D1P6 747 aa16.59■□□□□ 0.25
ATG3-201ENST00000283290 CPNE3O75131 537 aaKnown RBP16.59■□□□□ 0.25
ATG3-201ENST00000283290 PCNAP12004 261 aa16.59■□□□□ 0.25
ATG3-201ENST00000283290 ITGAXP20702 1163 aa16.59■□□□□ 0.25
ATG3-201ENST00000283290 HRH2P25021 359 aa16.59■□□□□ 0.25
ATG3-201ENST00000283290 ALDH3A1P30838 453 aa16.59■□□□□ 0.25
ATG3-201ENST00000283290 SCTRP47872 440 aa16.59■□□□□ 0.25
ATG3-201ENST00000283290 OR1D4P47884 311 aa16.59■□□□□ 0.25
ATG3-201ENST00000283290 MAGOHP61326 146 aaKnown RBP16.59■□□□□ 0.25
ATG3-201ENST00000283290 DDX39BQ13838 428 aaKnown RBP16.59■□□□□ 0.25
ATG3-201ENST00000283290 COL28A1Q2UY09 1125 aa16.59■□□□□ 0.25
ATG3-201ENST00000283290 PRTGQ2VWP7 1150 aa16.59■□□□□ 0.25
ATG3-201ENST00000283290 ZCCHC23Q6ZST2 131 aa16.59■□□□□ 0.25
ATG3-201ENST00000283290 VN1R5Q7Z5H4 357 aa16.59■□□□□ 0.25
ATG3-201ENST00000283290 ASPGQ86U10 573 aa16.59■□□□□ 0.25
ATG3-201ENST00000283290 BPHLQ86WA6 291 aaPredicted RBP16.59■□□□□ 0.25
ATG3-201ENST00000283290 NLGN4XQ8N0W4 816 aa16.59■□□□□ 0.25
ATG3-201ENST00000283290 ANKRD42Q8N9B4 389 aa16.59■□□□□ 0.25
ATG3-201ENST00000283290 NLGN4YQ8NFZ3 816 aaPredicted RBP16.59■□□□□ 0.25
ATG3-201ENST00000283290 OR8K5Q8NH50 307 aa16.59■□□□□ 0.25
ATG3-201ENST00000283290 PPP4R1Q8TF05 950 aa16.59■□□□□ 0.25
ATG3-201ENST00000283290 SLC13A3Q8WWT9 602 aa16.59■□□□□ 0.25
ATG3-201ENST00000283290 MR1Q95460 341 aa16.59■□□□□ 0.25
ATG3-201ENST00000283290 MTFMTQ96DP5 389 aaKnown RBP16.59■□□□□ 0.25
ATG3-201ENST00000283290 PTCD3Q96EY7 689 aaKnown RBP16.59■□□□□ 0.25
ATG3-201ENST00000283290 AICDAQ9GZX7 198 aa16.59■□□□□ 0.25
ATG3-201ENST00000283290 COPG2Q9UBF2 871 aa16.59■□□□□ 0.25
ATG3-201ENST00000283290 MRPS18BQ9Y676 258 aaKnown RBP16.59■□□□□ 0.25
ATG3-201ENST00000283290 A0A0G2JN53 185 aa16.58■□□□□ 0.24
ATG3-201ENST00000283290 C4orf51C9J302 202 aa16.58■□□□□ 0.24
ATG3-201ENST00000283290 SRPX2O60687 465 aaPredicted RBP16.58■□□□□ 0.24
ATG3-201ENST00000283290 H2AFYO75367 372 aaKnown RBP16.58■□□□□ 0.24
ATG3-201ENST00000283290 WFS1O76024 890 aa16.58■□□□□ 0.24
ATG3-201ENST00000283290 WT1P19544 449 aaPredicted RBP16.58■□□□□ 0.24
ATG3-201ENST00000283290 IMPDH1P20839 514 aa16.58■□□□□ 0.24
ATG3-201ENST00000283290 F8A1P23610 371 aa16.58■□□□□ 0.24
ATG3-201ENST00000283290 RORAP35398 523 aa16.58■□□□□ 0.24
ATG3-201ENST00000283290 ATP1A2P50993 1020 aa16.58■□□□□ 0.24
ATG3-201ENST00000283290 NAGLUP54802 743 aa16.58■□□□□ 0.24
ATG3-201ENST00000283290 TRAF3Q13114 568 aa16.58■□□□□ 0.24
ATG3-201ENST00000283290 GRM7Q14831 915 aa16.58■□□□□ 0.24
ATG3-201ENST00000283290 CPSF6Q16630 551 aaKnown RBP eCLIP16.58■□□□□ 0.24
ATG3-201ENST00000283290 TTMPQ5BVD1 217 aa16.58■□□□□ 0.24
ATG3-201ENST00000283290 BROXQ5VW32 411 aa16.58■□□□□ 0.24
ATG3-201ENST00000283290 TLDC1Q6P9B6 456 aa16.58■□□□□ 0.24
ATG3-201ENST00000283290 TMIGD1Q6UXZ0 262 aa16.58■□□□□ 0.24
ATG3-201ENST00000283290 IL22RA1Q8N6P7 574 aa16.58■□□□□ 0.24
ATG3-201ENST00000283290 TTC29Q8NA56 475 aaPredicted RBP16.58■□□□□ 0.24
ATG3-201ENST00000283290 CHST8Q9H2A9 424 aa16.58■□□□□ 0.24
ATG3-201ENST00000283290 CPNE5Q9HCH3 593 aa16.58■□□□□ 0.24
ATG3-201ENST00000283290 ZNF225Q9UK10 706 aa16.58■□□□□ 0.24
ATG3-201ENST00000283290 TMCO1Q9UM00 188 aa16.58■□□□□ 0.24
ATG3-201ENST00000283290 PCDHB3Q9Y5E6 796 aa16.58■□□□□ 0.24
ATG3-201ENST00000283290 LOC400499M0QZD8 3231 aa16.58■□□□□ 0.24
ATG3-201ENST00000283290 MGAQ8IWI9 3026 aa16.57■□□□□ 0.24
ATG3-201ENST00000283290 A0A0A6YYC8 382 aaPredicted RBP16.57■□□□□ 0.24
ATG3-201ENST00000283290 GOLGA6L10A6NI86 522 aa16.57■□□□□ 0.24
ATG3-201ENST00000283290 I3L1I5 382 aaPredicted RBP16.57■□□□□ 0.24
ATG3-201ENST00000283290 MEN1O00255 615 aa16.57■□□□□ 0.24
ATG3-201ENST00000283290 EFSO43281 561 aa16.57■□□□□ 0.24
ATG3-201ENST00000283290 OR4F21O95013 312 aa16.57■□□□□ 0.24
ATG3-201ENST00000283290 IL1RNP18510 177 aa16.57■□□□□ 0.24
ATG3-201ENST00000283290 GCGRP47871 477 aa16.57■□□□□ 0.24
ATG3-201ENST00000283290 NEK2P51955 445 aa16.57■□□□□ 0.24
ATG3-201ENST00000283290 CCNG1P51959 295 aa16.57■□□□□ 0.24
ATG3-201ENST00000283290 RPS18P62269 152 aaKnown RBP16.57■□□□□ 0.24
ATG3-201ENST00000283290 CLCQ05315 142 aa16.57■□□□□ 0.24
ATG3-201ENST00000283290 TCTE1Q5JU00 501 aa16.57■□□□□ 0.24
ATG3-201ENST00000283290 TCHHL1Q5QJ38 904 aaPredicted RBP16.57■□□□□ 0.24
ATG3-201ENST00000283290 MANEAQ5SRI9 462 aa16.57■□□□□ 0.24
ATG3-201ENST00000283290 LETMD1Q6P1Q0 360 aa16.57■□□□□ 0.24
ATG3-201ENST00000283290 DSELQ8IZU8 1212 aa16.57■□□□□ 0.24
ATG3-201ENST00000283290 ARHGEF39Q8N4T4 335 aa16.57■□□□□ 0.24
ATG3-201ENST00000283290 OR4F6Q8NGB9 312 aa16.57■□□□□ 0.24
ATG3-201ENST00000283290 MGARPQ8TDB4 240 aa16.57■□□□□ 0.24
ATG3-201ENST00000283290 CREB3L4Q8TEY5 395 aa16.57■□□□□ 0.24
ATG3-201ENST00000283290 CT55Q8WUE5 264 aa16.57■□□□□ 0.24
ATG3-201ENST00000283290 TM4SF19Q96DZ7 209 aa16.57■□□□□ 0.24
ATG3-201ENST00000283290 CCNL2Q96S94 520 aaPredicted RBP16.57■□□□□ 0.24
ATG3-201ENST00000283290 GSTO2Q9H4Y5 243 aa16.57■□□□□ 0.24
ATG3-201ENST00000283290 LHX9Q9NQ69 397 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms