RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 DNAAF1Q8NEP3 725 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 OR9A4Q8NGU2 314 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 LNX1Q8TBB1 728 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 SMARCD2Q92925 531 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 NAT6Q93015 286 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 RAD9AQ99638 391 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 C7orf50Q9BRJ6 194 aaKnown RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 ARHGAP39Q9C0H5 1083 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 HOXD1Q9GZZ0 328 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 NGBQ9NPG2 151 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 EPHA6Q9UF33 1036 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 TAC3Q9UHF0 121 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 PXDNQ92626 1479 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 UNC13CQ8NB66 2214 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 PRAMEF33A0A0G2JMD5 474 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 TRIM64CA6NLI5 447 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 D6RAR5 112 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 CLDN5O00501 218 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 PRAMEF10O60809 474 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 BCAS2O75934 225 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 SOD2P04179 222 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 C8BP07358 591 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 HTR1AP08908 422 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 ZNF806P0C7X5 589 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 IL4RP24394 825 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 HOXA9P31269 272 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 CDH11P55287 796 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 FOLH1Q04609 750 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 RAB31Q13636 194 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 BCL2A1Q16548 175 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 SWT1Q5T5J6 900 aaKnown RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 MLIPQ5VWP3 458 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 GLT8D1Q68CQ7 371 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 SLC39A4Q6P5W5 647 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 TMIGD1Q6UXZ0 262 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 CHERPQ8IWX8 916 aaKnown RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 CERS5Q8N5B7 392 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 SPERTQ8NA61 448 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 KCT2Q8NC54 265 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 SEC61A2Q9H9S3 476 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 ERVK-5Q9HDB9 667 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 PPP4R1LQ9P1A2 415 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 FBXW11Q9UKB1 542 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 SCML1Q9UN30 329 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 PLCL2Q9UPR0 1127 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 A0A0U1RQF3 1178 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 RPL17P18621 184 aaKnown RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 AZGP1P25311 298 aaKnown RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 MPSTP25325 297 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 CSKP41240 450 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 ACADVLP49748 655 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 CEBPGP53567 150 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 SLC10A7Q0GE19 358 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 KCTD21Q4G0X4 260 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 ARL13AQ5H913 290 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 MEDAGQ5VYS4 303 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 ADGRD1Q6QNK2 874 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 LANCL3Q6ZV70 420 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 KCNK18Q7Z418 384 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 ZDHHC21Q8IVQ6 265 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 RBM12BQ8IXT5 1001 aaKnown RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 NAA11Q9BSU3 229 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 URM1Q9BTM9 101 aaKnown RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 MROQ9BYG7 248 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 YTHDF1Q9BYJ9 559 aaKnown RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 MARCH7Q9H992 704 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 UNKLQ9H9P5 680 aaKnown RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 GOLGA2P5Q9HBQ8 144 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 CENPMQ9NSP4 180 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 NLGN3Q9NZ94 848 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 ACTR3BQ9P1U1 418 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 ICKQ9UPZ9 632 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 TESMINQ9Y4I5 508 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 MAP2P11137 1827 aaKnown RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 MROH2AA6NES4 1674 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 MT-CO2P00403 227 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 FPR1P21462 350 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 STC1P52823 247 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 OR12D2P58182 307 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 RING1Q06587 406 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 ZNF763Q0D2J5 394 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 RHEBQ15382 184 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 VMACQ2NL98 169 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 CHRFAM7AQ494W8 412 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 CDKL4Q5MAI5 379 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 FBXL22Q6P050 247 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 PLXDC1Q8IUK5 500 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 CMTR2Q8IYT2 770 aaKnown RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 ZDHHC14Q8IZN3 488 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 PAPD5Q8NDF8 572 aaKnown RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 STOML3Q8TAV4 291 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 PSMG2Q969U7 264 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 ZFP3Q96NJ6 502 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 TTYH2Q9BSA4 534 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 SLC22A4Q9H015 551 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 OR51V1Q9H2C8 321 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 SDHAF2Q9NX18 166 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 NUFIP1Q9UHK0 495 aaKnown RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms