RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 RAB43Q86YS6 212 aa6.22□□□□□ -1.41
CD44-204ENST00000279452 SRRM1Q8IYB3 904 aaKnown RBP6.22□□□□□ -1.41
CD44-204ENST00000279452 CNPY4Q8N129 248 aa6.22□□□□□ -1.41
CD44-204ENST00000279452 C4orf33Q8N1A6 199 aa6.22□□□□□ -1.41
CD44-204ENST00000279452 KCT2Q8NC54 265 aa6.22□□□□□ -1.41
CD44-204ENST00000279452 TRPV3Q8NET8 790 aa6.22□□□□□ -1.41
CD44-204ENST00000279452 ABHD11Q8NFV4 315 aa6.22□□□□□ -1.41
CD44-204ENST00000279452 OR9A4Q8NGU2 314 aa6.22□□□□□ -1.41
CD44-204ENST00000279452 ACMSDQ8TDX5 336 aa6.22□□□□□ -1.41
CD44-204ENST00000279452 UBTD2Q8WUN7 234 aa6.22□□□□□ -1.41
CD44-204ENST00000279452 EXTL1Q92935 676 aa6.22□□□□□ -1.41
CD44-204ENST00000279452 CAVIN3Q969G5 261 aa6.22□□□□□ -1.41
CD44-204ENST00000279452 MOCOSQ96EN8 888 aa6.22□□□□□ -1.41
CD44-204ENST00000279452 PTCD3Q96EY7 689 aaKnown RBP6.22□□□□□ -1.41
CD44-204ENST00000279452 C10orf90Q96M02 699 aa6.22□□□□□ -1.41
CD44-204ENST00000279452 MRPL57Q9BQC6 102 aaKnown RBP6.22□□□□□ -1.41
CD44-204ENST00000279452 EFCAB11Q9BUY7 163 aa6.22□□□□□ -1.41
CD44-204ENST00000279452 RBCK1Q9BYM8 510 aa6.22□□□□□ -1.41
CD44-204ENST00000279452 PRORYQ9H606 182 aa6.22□□□□□ -1.41
CD44-204ENST00000279452 IPPKQ9H8X2 491 aa6.22□□□□□ -1.41
CD44-204ENST00000279452 SYNPO2LQ9H987 977 aa6.22□□□□□ -1.41
CD44-204ENST00000279452 COPS7BQ9H9Q2 264 aaPredicted RBP6.22□□□□□ -1.41
CD44-204ENST00000279452 SEMA4BQ9NPR2 832 aaPredicted RBP6.22□□□□□ -1.41
CD44-204ENST00000279452 GEMIN8Q9NWZ8 242 aaKnown RBP6.22□□□□□ -1.41
CD44-204ENST00000279452 TMEM216Q9P0N5 145 aa6.22□□□□□ -1.41
CD44-204ENST00000279452 HCN3Q9P1Z3 774 aa6.22□□□□□ -1.41
CD44-204ENST00000279452 CTSFQ9UBX1 484 aa6.22□□□□□ -1.41
CD44-204ENST00000279452 ZNF282Q9UDV7 671 aaPredicted RBP6.22□□□□□ -1.41
CD44-204ENST00000279452 ZFP69BQ9UJL9 534 aa6.22□□□□□ -1.41
CD44-204ENST00000279452 RALYQ9UKM9 306 aaKnown RBP6.22□□□□□ -1.41
CD44-204ENST00000279452 TCFL5Q9UL49 500 aa6.22□□□□□ -1.41
CD44-204ENST00000279452 TMCO1Q9UM00 188 aa6.22□□□□□ -1.41
CD44-204ENST00000279452 MRPS2Q9Y399 296 aaKnown RBP6.22□□□□□ -1.41
CD44-204ENST00000279452 TNPO3Q9Y5L0 923 aaKnown RBP6.22□□□□□ -1.41
CD44-204ENST00000279452 KCNE1BA0A087WTH5 132 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 A0A0G2JN53 185 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 ARGFXA6NJG6 315 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 A8MT66 165 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 SGK494L7N484 410 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 PEX12O00623 359 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 RDH16O75452 317 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 KLHL18O94889 574 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 CD63P08962 238 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 ZNF888P0CJ79 500 aaPredicted RBP6.21□□□□□ -1.42
CD44-204ENST00000279452 MYL2P10916 166 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 MTHFD2P13995 350 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 TSPAN8P19075 237 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 ITGAXP20702 1163 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 AHRP35869 848 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 GGT5P36269 586 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 CCR10P46092 362 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 SCTRP47872 440 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 CCT5P48643 541 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 CSRP3P50461 194 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 CCNG1P51959 295 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 STXBP1P61764 594 aaKnown RBP6.21□□□□□ -1.42
CD44-204ENST00000279452 SKP1P63208 163 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 OLR1P78380 273 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 RHDQ02161 417 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 RELAQ04206 551 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 CHAF1BQ13112 559 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 LAPTM5Q13571 262 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 PWP1Q13610 501 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 IL10RAQ13651 578 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 HERC3Q15034 1050 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 CPSF6Q16630 551 aaKnown RBP eCLIP6.21□□□□□ -1.42
CD44-204ENST00000279452 DEFB134Q4QY38 66 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 CEP85LQ5SZL2 805 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 GARNL3Q5VVW2 1013 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 ZNF385CQ66K41 422 aaPredicted RBP6.21□□□□□ -1.42
CD44-204ENST00000279452 FAAH2Q6GMR7 532 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 TMEM214Q6NUQ4 689 aaKnown RBP6.21□□□□□ -1.42
CD44-204ENST00000279452 MED27Q6P2C8 311 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 BORAQ6PGQ7 559 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 COX15Q7KZN9 410 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 PRSS41Q7RTY9 318 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 GOLGA7Q7Z5G4 137 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 LCA5Q86VQ0 697 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 TDRPQ86YL5 185 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 KLHDC8AQ8IYD2 350 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 CYP4X1Q8N118 509 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 RIBC1Q8N443 379 aaPredicted RBP6.21□□□□□ -1.42
CD44-204ENST00000279452 CCNYL1Q8N7R7 359 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 ANKRD53Q8N9V6 530 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 TTLQ8NG68 377 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 OR4K1Q8NGD4 311 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 UBE2E3Q969T4 207 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 FKBP10Q96AY3 582 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 MIEF2Q96C03 454 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 REPS1Q96D71 796 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 FAR2Q96K12 515 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 ZNF285Q96NJ3 590 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 CATSPER2Q96P56 530 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 GPR78Q96P69 363 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 CDK15Q96Q40 435 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 SMC6Q96SB8 1091 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 CRB3Q9BUF7 120 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 RHBGQ9H310 441 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 NOL11Q9H8H0 719 aaKnown RBP6.21□□□□□ -1.42
CD44-204ENST00000279452 ACSS2Q9NR19 701 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms