RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 YAP1P46937 504 aaKnown RBP7.75□□□□□ -1.17
LIMD1-201ENST00000273317 SP2Q02086 613 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 FGL1Q08830 312 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 SLC10A7Q0GE19 358 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 HSDL1Q3SXM5 330 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 ARL9Q6T311 187 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 SPATA22Q8NHS9 363 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 FCAMRQ8WWV6 532 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 NOP16Q9Y3C1 178 aaKnown RBP7.75□□□□□ -1.17
LIMD1-201ENST00000273317 ZNF487B1APH4 448 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 ZNF41P51814 821 aaPredicted RBP7.75□□□□□ -1.17
LIMD1-201ENST00000273317 KCNC4Q03721 635 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 FAM110CQ1W6H9 321 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 C12orf40Q86WS4 652 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 NAT16Q8N8M0 369 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 GOLM1Q8NBJ4 401 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 FBXO15Q8NCQ5 510 aaPredicted RBP7.75□□□□□ -1.17
LIMD1-201ENST00000273317 PCDH19Q8TAB3 1148 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 BBS10Q8TAM1 723 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 ISOC1Q96CN7 298 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 GAL3ST1Q99999 423 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 NMUR1Q9HB89 426 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 HTR3EA5X5Y0 456 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 CCL16O15467 120 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 GKN3PP0CG01 181 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 XRCC1P18887 633 aaPredicted RBP7.75□□□□□ -1.17
LIMD1-201ENST00000273317 AHCYP23526 432 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 RGS19P49795 217 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 DAOAP59103 153 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 ABHD18Q0P651 414 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 ZNF460Q14592 562 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 SEC14L1Q92503 715 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 OTUB2Q96DC9 234 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 GLIS2Q9BZE0 524 aaPredicted RBP7.75□□□□□ -1.17
LIMD1-201ENST00000273317 WDR26Q9H7D7 661 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 DTLQ9NZJ0 730 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 NUFIP1Q9UHK0 495 aaKnown RBP7.75□□□□□ -1.17
LIMD1-201ENST00000273317 ARL5AQ9Y689 179 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 C9J4A7 227 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 I3L521 148 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 TOR1BO14657 336 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 PPM1BO75688 479 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 IFNA1P01562 189 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 FADDQ13158 208 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 GRHL3Q8TE85 626 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 PCED1BQ96HM7 432 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 BCL7BQ9BQE9 202 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 TLE6Q9H808 572 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 HCN4Q9Y3Q4 1203 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 TTLL8A6PVC2 850 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 AGTR1P30556 359 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 CD83Q01151 205 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 ABRAXAS2Q15018 415 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 SLC51AQ86UW1 340 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 OR8J3Q8NGG0 315 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 ZDHHC18Q9NUE0 388 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 MAFKO60675 156 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 GSK3BP49841 420 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 ASB18Q6ZVZ8 466 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 ZC3HC1Q86WB0 502 aaKnown RBP7.75□□□□□ -1.17
LIMD1-201ENST00000273317 ADAD1Q96M93 576 aaKnown RBP7.75□□□□□ -1.17
LIMD1-201ENST00000273317 ENAMQ9NRM1 1142 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 A0A0J9YVX5 310 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 BPNT1O95861 308 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 BMP8BP34820 402 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 CLCNKBP51801 687 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 EMX2Q04743 252 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 TRAM2Q15035 370 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 BMP8AQ7Z5Y6 402 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 TMEM184CQ9NVA4 438 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 IL36AQ9UHA7 158 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 OTOFQ9HC10 1997 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 TBX10O75333 385 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 OR12D2P58182 307 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 CARD16Q5EG05 197 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 CLEC12AQ5QGZ9 265 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 MAP1SQ66K74 1059 aaPredicted RBP7.75□□□□□ -1.17
LIMD1-201ENST00000273317 ITFG2Q969R8 447 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 SLC5A7Q9GZV3 580 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 TMLHEQ9NVH6 421 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 PPM1HQ9ULR3 514 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 HTR2AP28223 471 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 ST3GAL3Q11203 375 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 LDB1Q86U70 411 aaPredicted RBP7.74□□□□□ -1.17
LIMD1-201ENST00000273317 PYROXD2Q8N2H3 581 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 BPIFB1Q8TDL5 484 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 GNPDA2Q8TDQ7 276 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 CDK5RAP2Q96SN8 1893 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 LCHNA4D1U4 455 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 FAM170BA6NMN3 283 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 CLCA1A8K7I4 914 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 AGPSO00116 658 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 CCRL2O00421 344 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 NDUFS4O43181 175 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 HCKP08631 526 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 CD40LGP29965 261 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 BTBD16Q32M84 506 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 SH3D19Q5HYK7 790 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 LINGO4Q6UY18 593 aa7.74□□□□□ -1.17
LIMD1-201ENST00000273317 OR7D4Q8NG98 312 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms